RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C TDA6Q06466 467 aa5.36□□□□□ -1.55
RPA43YOR340C MET5P47169 1442 aa5.36□□□□□ -1.55
RPA43YOR340C MCX1P38323 520 aaPredicted RBP5.35□□□□□ -1.55
RPA43YOR340C GLO3P38682 493 aaKnown RBP5.35□□□□□ -1.55
RPA43YOR340C SSF1P38789 453 aaPredicted RBP5.35□□□□□ -1.55
RPA43YOR340C SPR3P41901 512 aa5.35□□□□□ -1.55
RPA43YOR340C SBE2P42223 864 aaKnown RBP5.35□□□□□ -1.55
RPA43YOR340C YBL113CQ7M4S9 792 aa5.35□□□□□ -1.55
RPA43YOR340C NTE1Q04958 1679 aa5.34□□□□□ -1.55
RPA43YOR340C FPS1P23900 669 aa5.34□□□□□ -1.55
RPA43YOR340C VMA3P25515 160 aa5.34□□□□□ -1.55
RPA43YOR340C GRS1P38088 690 aaKnown RBP5.34□□□□□ -1.55
RPA43YOR340C QDR2P40474 542 aa5.34□□□□□ -1.55
RPA43YOR340C ATG1P53104 897 aa5.34□□□□□ -1.55
RPA43YOR340C SPP41P38904 1435 aa5.33□□□□□ -1.56
RPA43YOR340C GPM1P00950 247 aaKnown RBP5.33□□□□□ -1.56
RPA43YOR340C RGP1P16664 663 aa5.33□□□□□ -1.56
RPA43YOR340C ERP5P38819 212 aa5.33□□□□□ -1.56
RPA43YOR340C QDR1P40475 563 aa5.33□□□□□ -1.56
RPA43YOR340C YMR187CQ03236 431 aa5.33□□□□□ -1.56
RPA43YOR340C LSO1Q3E827 93 aa5.33□□□□□ -1.56
RPA43YOR340C RPO21P04050 1733 aaKnown RBP5.33□□□□□ -1.56
RPA43YOR340C BNI1P41832 1953 aa5.33□□□□□ -1.56
RPA43YOR340C KAP122P32767 1081 aa5.32□□□□□ -1.56
RPA43YOR340C BOI1P38041 980 aaKnown RBP5.32□□□□□ -1.56
RPA43YOR340C LDH1P38139 375 aa5.32□□□□□ -1.56
RPA43YOR340C DYS1P38791 387 aa5.32□□□□□ -1.56
RPA43YOR340C SUT1P53032 299 aaKnown RBP5.32□□□□□ -1.56
RPA43YOR340C VTH1P40438 1549 aa5.32□□□□□ -1.56
RPA43YOR340C VTH2P40890 1549 aa5.32□□□□□ -1.56
RPA43YOR340C RPB10P22139 70 aa5.31□□□□□ -1.56
RPA43YOR340C TRM732Q03496 1420 aa5.31□□□□□ -1.56
RPA43YOR340C RPP1AP05318 106 aaPredicted RBP5.3□□□□□ -1.56
RPA43YOR340C SLD2P34252 453 aa5.3□□□□□ -1.56
RPA43YOR340C TY1A-DR2Q03964 440 aaKnown RBP5.3□□□□□ -1.56
RPA43YOR340C APC11Q12157 165 aa5.3□□□□□ -1.56
RPA43YOR340C TSC11P40061 1430 aa5.3□□□□□ -1.56
RPA43YOR340C NUP159P40477 1460 aa5.29□□□□□ -1.56
RPA43YOR340C MSC7P38694 644 aa5.29□□□□□ -1.56
RPA43YOR340C YNR014WP53719 212 aa5.29□□□□□ -1.56
RPA43YOR340C CUS1Q02554 436 aaPredicted RBP5.29□□□□□ -1.56
RPA43YOR340C TRL1P09880 827 aaKnown RBP5.28□□□□□ -1.56
RPA43YOR340C RPC31P17890 251 aa5.28□□□□□ -1.56
RPA43YOR340C YCK2P23292 546 aaKnown RBP5.28□□□□□ -1.56
RPA43YOR340C KNS1P32350 737 aaPredicted RBP5.28□□□□□ -1.56
RPA43YOR340C STM1P39015 273 aaKnown RBP5.28□□□□□ -1.56
RPA43YOR340C FIR1P40020 876 aa5.28□□□□□ -1.56
RPA43YOR340C HXT8P40886 569 aa5.28□□□□□ -1.56
RPA43YOR340C ACF4P47129 309 aa5.28□□□□□ -1.56
RPA43YOR340C LTE1P07866 1435 aa5.27□□□□□ -1.57
RPA43YOR340C SBP1P10080 294 aaKnown RBP5.27□□□□□ -1.57
RPA43YOR340C SMC1P32908 1225 aa5.27□□□□□ -1.57
RPA43YOR340C MDJ2P42834 146 aa5.27□□□□□ -1.57
RPA43YOR340C YOR296WQ08748 1289 aa5.27□□□□□ -1.57
RPA43YOR340C YDR215CQ12240 137 aa5.27□□□□□ -1.57
RPA43YOR340C SNQ2P32568 1501 aaKnown RBP5.27□□□□□ -1.57
RPA43YOR340C MYO4P32492 1471 aa5.26□□□□□ -1.57
RPA43YOR340C ISW1P38144 1129 aa5.26□□□□□ -1.57
RPA43YOR340C NCL1P38205 684 aaKnown RBP5.26□□□□□ -1.57
RPA43YOR340C GIP1P38229 639 aa5.26□□□□□ -1.57
RPA43YOR340C YBR287WP38355 427 aa5.26□□□□□ -1.57
RPA43YOR340C BSD2P38356 321 aa5.26□□□□□ -1.57
RPA43YOR340C YHL050CP38721 697 aa5.26□□□□□ -1.57
RPA43YOR340C YHR219WP38900 624 aa5.26□□□□□ -1.57
RPA43YOR340C BOI2P39969 1040 aa5.26□□□□□ -1.57
RPA43YOR340C SKP1P52286 194 aa5.26□□□□□ -1.57
RPA43YOR340C YNR040WP53736 256 aa5.26□□□□□ -1.57
RPA43YOR340C UFD2P54860 961 aa5.26□□□□□ -1.57
RPA43YOR340C SEN54Q02825 467 aaPredicted RBP5.26□□□□□ -1.57
RPA43YOR340C PDC5P16467 563 aaKnown RBP5.25□□□□□ -1.57
RPA43YOR340C MSN1P22148 382 aa5.25□□□□□ -1.57
RPA43YOR340C NAB2P32505 525 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
RPA43YOR340C KTR2P33550 425 aa5.25□□□□□ -1.57
RPA43YOR340C MET1P36150 593 aa5.25□□□□□ -1.57
RPA43YOR340C APM2P38700 605 aa5.25□□□□□ -1.57
RPA43YOR340C ULS1Q08562 1619 aa5.24□□□□□ -1.57
RPA43YOR340C RAD55P38953 406 aa5.24□□□□□ -1.57
RPA43YOR340C TRS120Q04183 1289 aa5.24□□□□□ -1.57
RPA43YOR340C NUT2Q06213 157 aa5.24□□□□□ -1.57
RPA43YOR340C MLP2P40457 1679 aa5.24□□□□□ -1.57
RPA43YOR340C SEC20P28791 383 aa5.23□□□□□ -1.57
RPA43YOR340C AMN1P38285 549 aaPredicted RBP5.23□□□□□ -1.57
RPA43YOR340C FRT1Q99332 602 aa5.23□□□□□ -1.57
RPA43YOR340C YTA7P40340 1379 aa5.23□□□□□ -1.57
RPA43YOR340C VPS15P22219 1454 aa5.23□□□□□ -1.57
RPA43YOR340C SPO14P36126 1683 aa5.23□□□□□ -1.57
RPA43YOR340C SNT2P53127 1403 aa5.23□□□□□ -1.57
RPA43YOR340C NTA1P40354 457 aa5.22□□□□□ -1.57
RPA43YOR340C RGD2P43556 714 aa5.22□□□□□ -1.57
RPA43YOR340C HEH2Q03281 663 aa5.22□□□□□ -1.57
RPA43YOR340C MSC6Q08818 692 aaKnown RBP5.22□□□□□ -1.57
RPA43YOR340C GEA2P39993 1459 aaKnown RBP5.21□□□□□ -1.58
RPA43YOR340C IRS4P36115 615 aaKnown RBP5.21□□□□□ -1.58
RPA43YOR340C IPL1P38991 367 aa5.21□□□□□ -1.58
RPA43YOR340C SLN1P39928 1220 aaPredicted RBP5.21□□□□□ -1.58
RPA43YOR340C PRK1P40494 810 aa5.21□□□□□ -1.58
RPA43YOR340C THI12P42883 340 aa5.21□□□□□ -1.58
RPA43YOR340C THI5P43534 340 aa5.21□□□□□ -1.58
RPA43YOR340C THI11P47183 340 aa5.21□□□□□ -1.58
RPA43YOR340C ITC1P53125 1264 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms