RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	HAT1	Q12341	374 aa		5.52	□□□□□ -1.53
TSR4	YOL022C	YBL113C	Q7M4S9	792 aa		5.52	□□□□□ -1.53
TSR4	YOL022C	HVG1	P0CE11	249 aa		5.51	□□□□□ -1.53
TSR4	YOL022C	PYC2	P32327	1180 aa	Known RBP	5.51	□□□□□ -1.53
TSR4	YOL022C	GIP2	P40036	548 aa		5.51	□□□□□ -1.53
TSR4	YOL022C	TED1	P40533	473 aa		5.51	□□□□□ -1.53
TSR4	YOL022C	SOK2	P53438	785 aa	Predicted RBP	5.51	□□□□□ -1.53
TSR4	YOL022C	GAS5	Q08193	484 aa		5.51	□□□□□ -1.53
TSR4	YOL022C	TY4B-P	A0A0B7P3V8	1104 aa		5.5	□□□□□ -1.53
TSR4	YOL022C	COB	P00163	385 aa		5.5	□□□□□ -1.53
TSR4	YOL022C	GRS1	P38088	690 aa	Known RBP	5.5	□□□□□ -1.53
TSR4	YOL022C	RRM3	P38766	723 aa		5.5	□□□□□ -1.53
TSR4	YOL022C	MCA1	Q08601	432 aa		5.5	□□□□□ -1.53
TSR4	YOL022C	GLO4	Q12320	285 aa		5.5	□□□□□ -1.53
TSR4	YOL022C	TY4A-H	Q6Q5P6	413 aa		5.5	□□□□□ -1.53
TSR4	YOL022C	FRT1	Q99332	602 aa		5.5	□□□□□ -1.53
TSR4	YOL022C	AI3	P03877	415 aa		5.49	□□□□□ -1.53
TSR4	YOL022C	GUP1	P53154	560 aa		5.48	□□□□□ -1.53
TSR4	YOL022C	NUT2	Q06213	157 aa		5.48	□□□□□ -1.53
TSR4	YOL022C	SFA1	P32771	386 aa		5.47	□□□□□ -1.53
TSR4	YOL022C	DUR3	P33413	735 aa		5.47	□□□□□ -1.53
TSR4	YOL022C	TAT1	P38085	619 aa		5.47	□□□□□ -1.53
TSR4	YOL022C	PAN5	P38787	379 aa		5.47	□□□□□ -1.53
TSR4	YOL022C	SSF1	P38789	453 aa	Predicted RBP	5.47	□□□□□ -1.53
TSR4	YOL022C	YJR124C	P47159	448 aa		5.47	□□□□□ -1.53
TSR4	YOL022C	GPI13	Q07830	1017 aa		5.47	□□□□□ -1.53
TSR4	YOL022C	PGM1	P33401	570 aa	Known RBP	5.46	□□□□□ -1.54
TSR4	YOL022C	LEM3	P42838	414 aa		5.46	□□□□□ -1.54
TSR4	YOL022C	YNR065C	P53751	1116 aa		5.46	□□□□□ -1.54
TSR4	YOL022C	CDC55	Q00362	526 aa		5.46	□□□□□ -1.54
TSR4	YOL022C	TY1A-NL1	Q12391	440 aa	Known RBP	5.46	□□□□□ -1.54
TSR4	YOL022C	RIM11	P38615	370 aa		5.45	□□□□□ -1.54
TSR4	YOL022C	LSB6	P42951	607 aa		5.45	□□□□□ -1.54
TSR4	YOL022C	YNL011C	P53980	444 aa		5.45	□□□□□ -1.54
TSR4	YOL022C	YPL034W	Q03083	165 aa		5.45	□□□□□ -1.54
TSR4	YOL022C	SAC7	P17121	654 aa		5.44	□□□□□ -1.54
TSR4	YOL022C	POL5	P39985	1022 aa	Known RBP	5.44	□□□□□ -1.54
TSR4	YOL022C	ARI1	P53111	347 aa	Known RBP	5.44	□□□□□ -1.54
TSR4	YOL022C	HAS1	Q03532	505 aa	Known RBP	5.44	□□□□□ -1.54
TSR4	YOL022C	MSH6	Q03834	1242 aa		5.44	□□□□□ -1.54
TSR4	YOL022C	BSC2	Q05611	235 aa		5.43	□□□□□ -1.54
TSR4	YOL022C	CMR1	Q12510	522 aa	Known RBP	5.43	□□□□□ -1.54
TSR4	YOL022C	FLP1	P03870	423 aa		5.42	□□□□□ -1.54
TSR4	YOL022C	PRP5	P21372	849 aa	Predicted RBP	5.42	□□□□□ -1.54
TSR4	YOL022C	DSE4	P53753	1117 aa		5.42	□□□□□ -1.54
TSR4	YOL022C	SPO71	Q03868	1245 aa		5.42	□□□□□ -1.54
TSR4	YOL022C	YHL050C	P38721	697 aa		5.41	□□□□□ -1.54
TSR4	YOL022C	YHR219W	P38900	624 aa		5.41	□□□□□ -1.54
TSR4	YOL022C	NEO1	P40527	1151 aa		5.41	□□□□□ -1.54
TSR4	YOL022C	FET4	P40988	552 aa		5.41	□□□□□ -1.54
TSR4	YOL022C	SAP155	P43612	1002 aa		5.41	□□□□□ -1.54
TSR4	YOL022C	NPR1	P22211	790 aa		5.4	□□□□□ -1.54
TSR4	YOL022C	ELG1	Q12050	791 aa		5.4	□□□□□ -1.54
TSR4	YOL022C	ERS1	P17261	260 aa		5.39	□□□□□ -1.55
TSR4	YOL022C	RSC6	P25632	483 aa		5.39	□□□□□ -1.55
TSR4	YOL022C	REC8	Q12188	680 aa		5.39	□□□□□ -1.55
TSR4	YOL022C	GLT1	Q12680	2145 aa	Known RBP	5.38	□□□□□ -1.55
TSR4	YOL022C	PPX1	P38698	397 aa		5.38	□□□□□ -1.55
TSR4	YOL022C	NUT1	P53114	1132 aa		5.38	□□□□□ -1.55
TSR4	YOL022C	NCE103	P53615	221 aa		5.38	□□□□□ -1.55
TSR4	YOL022C	MAE1	P36013	669 aa	Known RBP	5.37	□□□□□ -1.55
TSR4	YOL022C	YHL008C	P38750	627 aa		5.37	□□□□□ -1.55
TSR4	YOL022C	STM1	P39015	273 aa	Known RBP	5.37	□□□□□ -1.55
TSR4	YOL022C	INP54	Q08227	384 aa	Known RBP	5.37	□□□□□ -1.55
TSR4	YOL022C	MSC6	Q08818	692 aa	Known RBP	5.37	□□□□□ -1.55
TSR4	YOL022C	WHI5	Q12416	295 aa		5.37	□□□□□ -1.55
TSR4	YOL022C	HTS1	P07263	546 aa	Known RBP	5.36	□□□□□ -1.55
TSR4	YOL022C	PHO4	P07270	312 aa	Known RBP	5.36	□□□□□ -1.55
TSR4	YOL022C	MET4	P32389	672 aa		5.36	□□□□□ -1.55
TSR4	YOL022C	SEN54	Q02825	467 aa	Predicted RBP	5.36	□□□□□ -1.55
TSR4	YOL022C	NOC3	Q07896	663 aa	Predicted RBP	5.36	□□□□□ -1.55
TSR4	YOL022C	YIG1	Q08956	461 aa		5.36	□□□□□ -1.55
TSR4	YOL022C	ECM2	P38241	364 aa	Known RBP	5.35	□□□□□ -1.55
TSR4	YOL022C	SAM37	P50110	327 aa		5.35	□□□□□ -1.55
TSR4	YOL022C	YAF9	P53930	226 aa		5.35	□□□□□ -1.55
TSR4	YOL022C	YLR122C	Q12312	125 aa		5.35	□□□□□ -1.55
TSR4	YOL022C	GCV1	P48015	400 aa		5.34	□□□□□ -1.55
TSR4	YOL022C	KIP3	P53086	805 aa	Known RBP	5.34	□□□□□ -1.55
TSR4	YOL022C	PMT7	Q06644	662 aa		5.34	□□□□□ -1.55
TSR4	YOL022C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.34	□□□□□ -1.55	not detected
TSR4	YOL022C	SBP1	P10080	294 aa	Known RBP	5.33	□□□□□ -1.56
TSR4	YOL022C	NAM7	P30771	971 aa	Known RBP	5.33	□□□□□ -1.56
TSR4	YOL022C	COQ2	P32378	372 aa		5.33	□□□□□ -1.56
TSR4	YOL022C	SAF1	P38352	637 aa		5.33	□□□□□ -1.56
TSR4	YOL022C	CIC1	P38779	376 aa	Known RBP	5.33	□□□□□ -1.56
TSR4	YOL022C	FAR11	P53917	953 aa		5.33	□□□□□ -1.56
TSR4	YOL022C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-DR6	P0CX70	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-ER1	P0CX71	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-LR2	P0CX72	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-PL	P0CX73	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-JR1	P0CX74	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-LR3	P0CX75	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-ML2	P0CX76	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	AKR1	P39010	764 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	MON1	P53129	644 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	YCS4	Q06156	1176 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TOS4	Q06266	489 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-GR1	Q12085	440 aa		5.32	□□□□□ -1.56
TSR4	YOL022C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.32	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms