RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C PDC5P16467 563 aaKnown RBP4.07□□□□□ -1.76
RPB11YOL005C ATE1P16639 503 aa4.07□□□□□ -1.76
RPB11YOL005C MON1P53129 644 aa4.07□□□□□ -1.76
RPB11YOL005C FUS1P11710 512 aa4.06□□□□□ -1.76
RPB11YOL005C ALG14P38242 237 aa4.06□□□□□ -1.76
RPB11YOL005C INP51P40559 946 aaKnown RBP4.06□□□□□ -1.76
RPB11YOL005C YNR014WP53719 212 aa4.06□□□□□ -1.76
RPB11YOL005C CTR9P89105 1077 aa4.06□□□□□ -1.76
RPB11YOL005C FLP1P03870 423 aa4.05□□□□□ -1.76
RPB11YOL005C TRK2P28584 889 aa4.05□□□□□ -1.76
RPB11YOL005C KNS1P32350 737 aaPredicted RBP4.05□□□□□ -1.76
RPB11YOL005C VPS35P34110 944 aa4.05□□□□□ -1.76
RPB11YOL005C PGM2P37012 569 aaKnown RBP4.05□□□□□ -1.76
RPB11YOL005C NEO1P40527 1151 aa4.05□□□□□ -1.76
RPB11YOL005C SOK2P53438 785 aaPredicted RBP4.05□□□□□ -1.76
RPB11YOL005C ALD3P54114 506 aa4.05□□□□□ -1.76
RPB11YOL005C OYE2Q03558 400 aaKnown RBP4.05□□□□□ -1.76
RPB11YOL005C DAL4Q04895 635 aa4.05□□□□□ -1.76
RPB11YOL005C COBP00163 385 aa4.04□□□□□ -1.76
RPB11YOL005C MCM2P29469 868 aa4.04□□□□□ -1.76
RPB11YOL005C SEC8P32855 1065 aa4.04□□□□□ -1.76
RPB11YOL005C MET1P36150 593 aa4.04□□□□□ -1.76
RPB11YOL005C THI72Q08579 599 aa4.04□□□□□ -1.76
RPB11YOL005C AI1P03875 834 aa4.03□□□□□ -1.76
RPB11YOL005C MCM5P29496 775 aaKnown RBP4.03□□□□□ -1.76
RPB11YOL005C PEP7P32609 515 aa4.03□□□□□ -1.76
RPB11YOL005C TFA2P36145 328 aa4.03□□□□□ -1.76
RPB11YOL005C BOI2P39969 1040 aa4.03□□□□□ -1.76
RPB11YOL005C TED1P40533 473 aa4.03□□□□□ -1.76
RPB11YOL005C SBE2P42223 864 aaKnown RBP4.03□□□□□ -1.76
RPB11YOL005C LSB6P42951 607 aa4.03□□□□□ -1.76
RPB11YOL005C YJR124CP47159 448 aa4.03□□□□□ -1.76
RPB11YOL005C BIO5P53744 561 aaKnown RBP4.03□□□□□ -1.76
RPB11YOL005C YCS4Q06156 1176 aa4.03□□□□□ -1.76
RPB11YOL005C NHA1Q99271 985 aa4.03□□□□□ -1.76
RPB11YOL005C NAR1P23503 491 aaKnown RBP4.02□□□□□ -1.77
RPB11YOL005C UGA4P32837 571 aa4.02□□□□□ -1.77
RPB11YOL005C PRP40P33203 583 aaKnown RBP4.02□□□□□ -1.77
RPB11YOL005C RPS26AP39938 119 aaKnown RBP4.02□□□□□ -1.77
RPB11YOL005C RPS26BP39939 119 aaKnown RBP4.02□□□□□ -1.77
RPB11YOL005C GIP2P40036 548 aa4.02□□□□□ -1.77
RPB11YOL005C FET4P40988 552 aa4.02□□□□□ -1.77
RPB11YOL005C RSM26P47141 266 aa4.02□□□□□ -1.77
RPB11YOL005C NUT1P53114 1132 aa4.02□□□□□ -1.77
RPB11YOL005C SNU71P53207 620 aaKnown RBP4.02□□□□□ -1.77
RPB11YOL005C GIS4Q04233 774 aa4.02□□□□□ -1.77
RPB11YOL005C SPR28Q04921 423 aa4.02□□□□□ -1.77
RPB11YOL005C TOS4Q06266 489 aa4.02□□□□□ -1.77
RPB11YOL005C RRP15Q06511 250 aaPredicted RBP4.02□□□□□ -1.77
RPB11YOL005C GLO4Q12320 285 aa4.02□□□□□ -1.77
RPB11YOL005C KAR2P16474 682 aaKnown RBP4.01□□□□□ -1.77
RPB11YOL005C NPR1P22211 790 aa4.01□□□□□ -1.77
RPB11YOL005C DUR3P33413 735 aa4.01□□□□□ -1.77
RPB11YOL005C SQT1P35184 431 aa4.01□□□□□ -1.77
RPB11YOL005C FAA3P39002 694 aa4.01□□□□□ -1.77
RPB11YOL005C RVS167P39743 482 aaKnown RBP4.01□□□□□ -1.77
RPB11YOL005C FYV10P40492 516 aa4.01□□□□□ -1.77
RPB11YOL005C YNR065CP53751 1116 aa4.01□□□□□ -1.77
RPB11YOL005C NSG2P53898 299 aa4.01□□□□□ -1.77
RPB11YOL005C PMT7Q06644 662 aa4.01□□□□□ -1.77
RPB11YOL005C MDJ1P35191 511 aa4□□□□□ -1.77
RPB11YOL005C PAN5P38787 379 aa4□□□□□ -1.77
RPB11YOL005C PEX13P80667 386 aa4□□□□□ -1.77
RPB11YOL005C SOG2Q08817 791 aa4□□□□□ -1.77
RPB11YOL005C CMR1Q12510 522 aaKnown RBP4□□□□□ -1.77
RPB11YOL005C SAC7P17121 654 aa3.99□□□□□ -1.77
RPB11YOL005C RRM3P38766 723 aa3.99□□□□□ -1.77
RPB11YOL005C YJR107WP47145 328 aa3.99□□□□□ -1.77
RPB11YOL005C GUP1P53154 560 aa3.99□□□□□ -1.77
RPB11YOL005C YAF9P53930 226 aa3.99□□□□□ -1.77
RPB11YOL005C ULP1Q02724 621 aa3.99□□□□□ -1.77
RPB11YOL005C HAS1Q03532 505 aaKnown RBP3.99□□□□□ -1.77
RPB11YOL005C MSH6Q03834 1242 aa3.99□□□□□ -1.77
RPB11YOL005C YMR074CQ04773 145 aa3.99□□□□□ -1.77
RPB11YOL005C TDA6Q06466 467 aa3.99□□□□□ -1.77
RPB11YOL005C PRE9P23638 258 aaKnown RBP3.98□□□□□ -1.77
RPB11YOL005C RIM11P38615 370 aa3.98□□□□□ -1.77
RPB11YOL005C MRPS18P42847 217 aa3.98□□□□□ -1.77
RPB11YOL005C NOP7P53261 605 aaKnown RBP3.98□□□□□ -1.77
RPB11YOL005C YGR122WP53272 402 aa3.98□□□□□ -1.77
RPB11YOL005C SPO71Q03868 1245 aa3.98□□□□□ -1.77
RPB11YOL005C RAD2P07276 1031 aa3.97□□□□□ -1.77
RPB11YOL005C YKL077WP36081 392 aa3.97□□□□□ -1.77
RPB11YOL005C AMN1P38285 549 aaPredicted RBP3.97□□□□□ -1.77
RPB11YOL005C SHU2P38957 223 aa3.97□□□□□ -1.77
RPB11YOL005C LEM3P42838 414 aa3.97□□□□□ -1.77
RPB11YOL005C JIP5Q06214 492 aaPredicted RBP3.97□□□□□ -1.77
RPB11YOL005C SLP1Q12232 587 aa3.97□□□□□ -1.77
RPB11YOL005C TY4B-PA0A0B7P3V8 1104 aa3.96□□□□□ -1.78
RPB11YOL005C HXK1P04806 485 aaKnown RBP3.96□□□□□ -1.78
RPB11YOL005C HTS1P07263 546 aaKnown RBP3.96□□□□□ -1.78
RPB11YOL005C CYC8P14922 966 aa3.96□□□□□ -1.78
RPB11YOL005C ADI1Q03677 179 aa3.96□□□□□ -1.78
RPB11YOL005C ESF1Q06344 628 aaKnown RBP3.96□□□□□ -1.78
RPB11YOL005C GAS5Q08193 484 aa3.96□□□□□ -1.78
RPB11YOL005C TY4A-HQ6Q5P6 413 aa3.96□□□□□ -1.78
RPB11YOL005C HVG1P0CE11 249 aa3.95□□□□□ -1.78
RPB11YOL005C ERS1P17261 260 aa3.95□□□□□ -1.78
RPB11YOL005C MAE1P36013 669 aaKnown RBP3.95□□□□□ -1.78
RPB11YOL005C ATG14P38270 344 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms