RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W RAD2P07276 1031 aa3.23□□□□□ -1.89
CAF120YNL278W CBP3P21560 335 aa3.23□□□□□ -1.89
CAF120YNL278W AKL1P38080 1108 aaKnown RBP3.23□□□□□ -1.89
CAF120YNL278W NMD2P38798 1089 aaKnown RBP3.23□□□□□ -1.89
CAF120YNL278W TAT2P38967 592 aa3.23□□□□□ -1.89
CAF120YNL278W BOI2P39969 1040 aa3.23□□□□□ -1.89
CAF120YNL278W REF2P42073 533 aaPredicted RBP3.23□□□□□ -1.89
CAF120YNL278W RPA135P22138 1203 aaKnown RBP3.23□□□□□ -1.89
CAF120YNL278W SEC20P28791 383 aa3.23□□□□□ -1.89
CAF120YNL278W VPS29P38759 282 aa3.23□□□□□ -1.89
CAF120YNL278W SLD2P34252 453 aa3.22□□□□□ -1.89
CAF120YNL278W TGL3P40308 642 aa3.22□□□□□ -1.89
CAF120YNL278W RRT6P53117 311 aaPredicted RBP3.22□□□□□ -1.89
CAF120YNL278W ATF2P53296 535 aa3.22□□□□□ -1.89
CAF120YNL278W SQS1P53866 767 aaKnown RBP3.22□□□□□ -1.89
CAF120YNL278W DNM1P54861 757 aa3.22□□□□□ -1.89
CAF120YNL278W AOS1Q06624 347 aa3.22□□□□□ -1.89
CAF120YNL278W YDL144CQ07589 356 aa3.22□□□□□ -1.89
CAF120YNL278W SUP45P12385 437 aaKnown RBP3.22□□□□□ -1.89
CAF120YNL278W SPC110P32380 944 aa3.22□□□□□ -1.89
CAF120YNL278W POL32P47110 350 aa3.22□□□□□ -1.89
CAF120YNL278W HST1P53685 503 aa3.22□□□□□ -1.89
CAF120YNL278W YNL058CP53947 316 aa3.22□□□□□ -1.89
CAF120YNL278W GCR2Q01722 534 aa3.22□□□□□ -1.89
CAF120YNL278W MEC3Q02574 474 aa3.22□□□□□ -1.89
CAF120YNL278W GIR2Q03768 265 aaPredicted RBP3.22□□□□□ -1.89
CAF120YNL278W MRX10Q05648 414 aa3.22□□□□□ -1.89
CAF120YNL278W DIB1Q06819 143 aaPredicted RBP3.22□□□□□ -1.89
CAF120YNL278W CAB1Q04430 367 aa3.22□□□□□ -1.89
CAF120YNL278W FPR4Q06205 392 aaPredicted RBP3.22□□□□□ -1.89
CAF120YNL278W PSK2Q08217 1101 aa3.22□□□□□ -1.89
CAF120YNL278W LAA1P39526 2014 aa3.21□□□□□ -1.89
CAF120YNL278W CYB2P00175 591 aa3.21□□□□□ -1.9
CAF120YNL278W AIM9P40053 627 aaKnown RBP3.21□□□□□ -1.9
CAF120YNL278W TCB2P48231 1178 aa3.21□□□□□ -1.9
CAF120YNL278W MEH1Q02205 184 aa3.21□□□□□ -1.9
CAF120YNL278W NSE3Q05541 303 aa3.21□□□□□ -1.9
CAF120YNL278W RNA1P11745 407 aaKnown RBP3.21□□□□□ -1.9
CAF120YNL278W ROX1P25042 368 aa3.21□□□□□ -1.9
CAF120YNL278W GRX1P25373 110 aaKnown RBP3.21□□□□□ -1.9
CAF120YNL278W UBP14P38237 781 aaKnown RBP3.21□□□□□ -1.9
CAF120YNL278W CCC2P38995 1004 aa3.21□□□□□ -1.9
CAF120YNL278W MDJ2P42834 146 aa3.21□□□□□ -1.9
CAF120YNL278W RPL22BP56628 122 aaKnown RBP3.21□□□□□ -1.9
CAF120YNL278W YOR238WQ08634 303 aa3.21□□□□□ -1.9
CAF120YNL278W PFF1P38244 976 aa3.2□□□□□ -1.9
CAF120YNL278W ERP5P38819 212 aa3.2□□□□□ -1.9
CAF120YNL278W HOS4P40480 1083 aa3.2□□□□□ -1.9
CAF120YNL278W CSN12P47130 423 aa3.2□□□□□ -1.9
CAF120YNL278W SRT1Q03175 343 aa3.2□□□□□ -1.9
CAF120YNL278W YLR407WQ06070 228 aa3.2□□□□□ -1.9
CAF120YNL278W MSC6Q08818 692 aaKnown RBP3.2□□□□□ -1.9
CAF120YNL278W PSF3Q12146 194 aa3.2□□□□□ -1.9
CAF120YNL278W QCR6P00127 147 aa3.2□□□□□ -1.9
CAF120YNL278W PIF1P07271 859 aa3.2□□□□□ -1.9
CAF120YNL278W VHR2P40041 505 aa3.2□□□□□ -1.9
CAF120YNL278W PEA2P40091 420 aa3.2□□□□□ -1.9
CAF120YNL278W UBX2Q04228 584 aa3.2□□□□□ -1.9
CAF120YNL278W YOL098CQ12496 1037 aa3.2□□□□□ -1.9
CAF120YNL278W YDR034W-BQ6Q5X2 51 aa3.2□□□□□ -1.9
CAF120YNL278W MPH3P0CE00 602 aa3.2□□□□□ -1.9
CAF120YNL278W RDS2P19541 446 aaKnown RBP3.2□□□□□ -1.9
CAF120YNL278W DBP1P24784 617 aaKnown RBP3.2□□□□□ -1.9
CAF120YNL278W NFU1P32860 256 aa3.2□□□□□ -1.9
CAF120YNL278W APE3P37302 537 aaKnown RBP3.2□□□□□ -1.9
CAF120YNL278W RTT109Q07794 436 aa3.2□□□□□ -1.9
CAF120YNL278W SSP2Q08646 371 aa3.2□□□□□ -1.9
CAF120YNL278W KAR2P16474 682 aaKnown RBP3.19□□□□□ -1.9
CAF120YNL278W MSP1P28737 362 aa3.19□□□□□ -1.9
CAF120YNL278W HSP104P31539 908 aaKnown RBP3.19□□□□□ -1.9
CAF120YNL278W VPS24P36095 224 aaKnown RBP3.19□□□□□ -1.9
CAF120YNL278W YMR1P47147 688 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
CAF120YNL278W MAL13P53338 473 aa3.19□□□□□ -1.9
CAF120YNL278W ALG12P53730 551 aa3.19□□□□□ -1.9
CAF120YNL278W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
CAF120YNL278W SPP1Q03012 353 aa3.19□□□□□ -1.9
CAF120YNL278W ETT1Q08421 412 aaKnown RBP3.19□□□□□ -1.9
CAF120YNL278W PET111P08468 800 aa3.19□□□□□ -1.9
CAF120YNL278W HSC82P15108 705 aaKnown RBP3.19□□□□□ -1.9
CAF120YNL278W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
CAF120YNL278W CDC11P32458 415 aa3.19□□□□□ -1.9
CAF120YNL278W TPM2P40414 161 aa3.19□□□□□ -1.9
CAF120YNL278W RPL34AP87262 121 aaPredicted RBP3.19□□□□□ -1.9
CAF120YNL278W ERV41Q04651 352 aa3.19□□□□□ -1.9
CAF120YNL278W ECM29P38737 1868 aa3.19□□□□□ -1.9
CAF120YNL278W PCT1P13259 424 aa3.18□□□□□ -1.9
CAF120YNL278W SCJ1P25303 377 aa3.18□□□□□ -1.9
CAF120YNL278W PEP12P32854 288 aa3.18□□□□□ -1.9
CAF120YNL278W SEC8P32855 1065 aa3.18□□□□□ -1.9
CAF120YNL278W YHL017WP38745 532 aa3.18□□□□□ -1.9
CAF120YNL278W RTR1P40084 226 aaPredicted RBP3.18□□□□□ -1.9
CAF120YNL278W GRX3Q03835 250 aa3.18□□□□□ -1.9
CAF120YNL278W TSR4P25040 408 aa3.18□□□□□ -1.9
CAF120YNL278W STS1P38637 319 aa3.18□□□□□ -1.9
CAF120YNL278W ERP2P39704 215 aa3.18□□□□□ -1.9
CAF120YNL278W YML119WQ03208 357 aa3.18□□□□□ -1.9
CAF120YNL278W HIM1Q06674 414 aa3.18□□□□□ -1.9
CAF120YNL278W YBL029C-AQ3E756 94 aa3.18□□□□□ -1.9
CAF120YNL278W YBL113CQ7M4S9 792 aa3.18□□□□□ -1.9
CAF120YNL278W DDP1Q99321 188 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms