RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A YIL165CP40446 119 aa6.38□□□□□ -1.39
YNL054W-AYNL054W-A NUT1P53114 1132 aa6.38□□□□□ -1.39
YNL054W-AYNL054W-A DOS2P54858 310 aa6.38□□□□□ -1.39
YNL054W-AYNL054W-A PIC2P40035 300 aa6.37□□□□□ -1.39
YNL054W-AYNL054W-A SAP155P43612 1002 aa6.37□□□□□ -1.39
YNL054W-AYNL054W-A YNR040WP53736 256 aa6.37□□□□□ -1.39
YNL054W-AYNL054W-A ADI1Q03677 179 aa6.37□□□□□ -1.39
YNL054W-AYNL054W-A KAR2P16474 682 aaKnown RBP6.36□□□□□ -1.39
YNL054W-AYNL054W-A PYC2P32327 1180 aaKnown RBP6.36□□□□□ -1.39
YNL054W-AYNL054W-A TAT2P38967 592 aa6.36□□□□□ -1.39
YNL054W-AYNL054W-A YJL049WP47048 450 aa6.36□□□□□ -1.39
YNL054W-AYNL054W-A ULP1Q02724 621 aa6.36□□□□□ -1.39
YNL054W-AYNL054W-A CDC34P14682 295 aa6.35□□□□□ -1.39
YNL054W-AYNL054W-A NMD2P38798 1089 aaKnown RBP6.35□□□□□ -1.39
YNL054W-AYNL054W-A LSC2P53312 427 aa6.35□□□□□ -1.39
YNL054W-AYNL054W-A CDC19P00549 500 aaKnown RBP6.34□□□□□ -1.39
YNL054W-AYNL054W-A APM2P38700 605 aa6.34□□□□□ -1.39
YNL054W-AYNL054W-A UBP15P50101 1230 aa6.34□□□□□ -1.39
YNL054W-AYNL054W-A IOC4Q04213 475 aa6.34□□□□□ -1.39
YNL054W-AYNL054W-A NSE3Q05541 303 aa6.34□□□□□ -1.39
YNL054W-AYNL054W-A SRF1Q12516 437 aa6.34□□□□□ -1.39
YNL054W-AYNL054W-A SPC42P36094 363 aa6.33□□□□□ -1.4
YNL054W-AYNL054W-A BRN1P38170 754 aa6.33□□□□□ -1.4
YNL054W-AYNL054W-A RIM11P38615 370 aa6.33□□□□□ -1.4
YNL054W-AYNL054W-A RVS167P39743 482 aaKnown RBP6.33□□□□□ -1.4
YNL054W-AYNL054W-A FAA4P47912 694 aaKnown RBP6.33□□□□□ -1.4
YNL054W-AYNL054W-A MON1P53129 644 aa6.33□□□□□ -1.4
YNL054W-AYNL054W-A YGR053CP53234 283 aa6.33□□□□□ -1.4
YNL054W-AYNL054W-A WRS1Q12109 432 aaKnown RBP6.33□□□□□ -1.4
YNL054W-AYNL054W-A TCB1Q12466 1186 aa6.33□□□□□ -1.4
YNL054W-AYNL054W-A PRP5P21372 849 aaPredicted RBP6.32□□□□□ -1.4
YNL054W-AYNL054W-A YER156CP40093 338 aaKnown RBP6.32□□□□□ -1.4
YNL054W-AYNL054W-A GNP1P48813 663 aa6.32□□□□□ -1.4
YNL054W-AYNL054W-A CWC24P53769 259 aa6.32□□□□□ -1.4
YNL054W-AYNL054W-A YAF9P53930 226 aa6.32□□□□□ -1.4
YNL054W-AYNL054W-A GCR1P07261 785 aa6.31□□□□□ -1.4
YNL054W-AYNL054W-A CIT2P08679 460 aa6.31□□□□□ -1.4
YNL054W-AYNL054W-A RNH70P53331 553 aa6.31□□□□□ -1.4
YNL054W-AYNL054W-A GDE1Q02979 1223 aa6.31□□□□□ -1.4
YNL054W-AYNL054W-A RPN4Q03465 531 aa6.31□□□□□ -1.4
YNL054W-AYNL054W-A SRC1Q03707 834 aa6.31□□□□□ -1.4
YNL054W-AYNL054W-A STI1P15705 589 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
YNL054W-AYNL054W-A SRP40P32583 406 aaPredicted RBP6.3□□□□□ -1.4
YNL054W-AYNL054W-A BUD6P41697 788 aa6.3□□□□□ -1.4
YNL054W-AYNL054W-A PMT7Q06644 662 aa6.3□□□□□ -1.4
YNL054W-AYNL054W-A CMR1Q12510 522 aaKnown RBP6.3□□□□□ -1.4
YNL054W-AYNL054W-A MRPL16P38064 232 aa6.29□□□□□ -1.4
YNL054W-AYNL054W-A ECM2P38241 364 aaKnown RBP6.29□□□□□ -1.4
YNL054W-AYNL054W-A BDF2Q07442 638 aa6.29□□□□□ -1.4
YNL054W-AYNL054W-A RTT10Q08924 1013 aa6.29□□□□□ -1.4
YNL054W-AYNL054W-A IDI1P15496 288 aa6.28□□□□□ -1.4
YNL054W-AYNL054W-A GRX1P25373 110 aaKnown RBP6.28□□□□□ -1.4
YNL054W-AYNL054W-A YKL091CP33324 310 aaKnown RBP6.28□□□□□ -1.4
YNL054W-AYNL054W-A EEB1Q02891 456 aa6.28□□□□□ -1.4
YNL054W-AYNL054W-A NOG1Q02892 647 aaKnown RBP6.28□□□□□ -1.4
YNL054W-AYNL054W-A OPI10Q08202 246 aa6.28□□□□□ -1.4
YNL054W-AYNL054W-A GLO4Q12320 285 aa6.28□□□□□ -1.4
YNL054W-AYNL054W-A HVG1P0CE11 249 aa6.27□□□□□ -1.41
YNL054W-AYNL054W-A SEC23P15303 768 aaKnown RBP6.27□□□□□ -1.41
YNL054W-AYNL054W-A NPR1P22211 790 aa6.27□□□□□ -1.41
YNL054W-AYNL054W-A NCL1P38205 684 aaKnown RBP6.27□□□□□ -1.41
YNL054W-AYNL054W-A SPF1P39986 1215 aaKnown RBP6.27□□□□□ -1.41
YNL054W-AYNL054W-A NAM8Q00539 523 aaKnown RBP6.27□□□□□ -1.41
YNL054W-AYNL054W-A HEM13P11353 328 aaKnown RBP6.26□□□□□ -1.41
YNL054W-AYNL054W-A AMN1P38285 549 aaPredicted RBP6.26□□□□□ -1.41
YNL054W-AYNL054W-A MSC7P38694 644 aa6.26□□□□□ -1.41
YNL054W-AYNL054W-A OSH7P38755 437 aa6.26□□□□□ -1.41
YNL054W-AYNL054W-A PPT1P53043 513 aa6.26□□□□□ -1.41
YNL054W-AYNL054W-A YGL140CP53120 1219 aa6.26□□□□□ -1.41
YNL054W-AYNL054W-A UBP2Q01476 1272 aa6.26□□□□□ -1.41
YNL054W-AYNL054W-A FUS1P11710 512 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A YKL069WP36088 180 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A PBP2P38151 413 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
YNL054W-AYNL054W-A PEX28P38848 579 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A HXT13P39924 564 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A XKS1P42826 600 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A HXT17P53631 564 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A HXT15P54854 567 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A PPM2Q08282 695 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A TAF13P11747 167 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A PRI2P20457 528 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A RRP14P36080 434 aaKnown RBP6.25□□□□□ -1.41
YNL054W-AYNL054W-A TFA2P36145 328 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A GLY1P37303 387 aaKnown RBP6.25□□□□□ -1.41
YNL054W-AYNL054W-A RDH54P38086 958 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A OPT2Q06593 877 aa6.25□□□□□ -1.41
YNL054W-AYNL054W-A CDC53Q12018 815 aaKnown RBP6.25□□□□□ -1.41
YNL054W-AYNL054W-A RSM26P47141 266 aa6.24□□□□□ -1.41
YNL054W-AYNL054W-A HUL5P53119 910 aa6.24□□□□□ -1.41
YNL054W-AYNL054W-A ALG12P53730 551 aa6.24□□□□□ -1.41
YNL054W-AYNL054W-A BIO5P53744 561 aaKnown RBP6.24□□□□□ -1.41
YNL054W-AYNL054W-A KRE33P53914 1056 aaKnown RBP6.24□□□□□ -1.41
YNL054W-AYNL054W-A FAR11P53917 953 aa6.24□□□□□ -1.41
YNL054W-AYNL054W-A HEH2Q03281 663 aa6.24□□□□□ -1.41
YNL054W-AYNL054W-A TDA5Q06417 326 aaKnown RBP6.24□□□□□ -1.41
YNL054W-AYNL054W-A RSC2Q06488 889 aa6.24□□□□□ -1.41
YNL054W-AYNL054W-A TMA46Q12000 345 aaKnown RBP6.24□□□□□ -1.41
YNL054W-AYNL054W-A SQT1P35184 431 aa6.23□□□□□ -1.41
YNL054W-AYNL054W-A INP51P40559 946 aaKnown RBP6.23□□□□□ -1.41
YNL054W-AYNL054W-A OSW7P43611 510 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms