RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	NFS1	P25374	497 aa		3.66	□□□□□ -1.82
YKU70	YMR284W	ACS2	P52910	683 aa	Known RBP	3.66	□□□□□ -1.82
YKU70	YMR284W	YOR059C	Q08448	450 aa	Known RBP	3.66	□□□□□ -1.82
YKU70	YMR284W	SOG2	Q08817	791 aa		3.66	□□□□□ -1.82
YKU70	YMR284W	WHI3	P34761	661 aa	Known RBP	3.65	□□□□□ -1.82
YKU70	YMR284W	BSD2	P38356	321 aa		3.65	□□□□□ -1.82
YKU70	YMR284W	KIP3	P53086	805 aa	Known RBP	3.65	□□□□□ -1.82
YKU70	YMR284W	MRX10	Q05648	414 aa		3.65	□□□□□ -1.82
YKU70	YMR284W	ISW1	P38144	1129 aa		3.65	□□□□□ -1.83
YKU70	YMR284W	YIL165C	P40446	119 aa		3.65	□□□□□ -1.83
YKU70	YMR284W	CWH41	P53008	833 aa		3.65	□□□□□ -1.83
YKU70	YMR284W	LEU3	P08638	886 aa		3.64	□□□□□ -1.83
YKU70	YMR284W	VMA3	P25515	160 aa		3.64	□□□□□ -1.83
YKU70	YMR284W	BIO5	P53744	561 aa	Known RBP	3.64	□□□□□ -1.83
YKU70	YMR284W	RCM1	P53972	490 aa		3.64	□□□□□ -1.83
YKU70	YMR284W	LDH1	P38139	375 aa		3.63	□□□□□ -1.83
YKU70	YMR284W	RPN1	P38764	993 aa	Known RBP	3.63	□□□□□ -1.83
YKU70	YMR284W	FAR11	P53917	953 aa		3.63	□□□□□ -1.83
YKU70	YMR284W	ENO1	P00924	437 aa	Known RBP	3.63	□□□□□ -1.83
YKU70	YMR284W	ERS1	P17261	260 aa		3.63	□□□□□ -1.83
YKU70	YMR284W	ADP1	P25371	1049 aa		3.62	□□□□□ -1.83
YKU70	YMR284W	YBR287W	P38355	427 aa		3.62	□□□□□ -1.83
YKU70	YMR284W	NEO1	P40527	1151 aa		3.62	□□□□□ -1.83
YKU70	YMR284W	MRPL33	P20084	86 aa		3.61	□□□□□ -1.83
YKU70	YMR284W	VAN1	P23642	535 aa		3.61	□□□□□ -1.83
YKU70	YMR284W	PEP12	P32854	288 aa		3.61	□□□□□ -1.83
YKU70	YMR284W	ABZ1	P37254	787 aa	Predicted RBP	3.6	□□□□□ -1.83
YKU70	YMR284W	TFA2	P36145	328 aa		3.6	□□□□□ -1.83
YKU70	YMR284W	AIM3	P38266	947 aa	Known RBP	3.6	□□□□□ -1.83
YKU70	YMR284W	RIM8	P53179	542 aa		3.6	□□□□□ -1.83
YKU70	YMR284W	ALD3	P54114	506 aa		3.6	□□□□□ -1.83
YKU70	YMR284W	ORC3	P54790	616 aa		3.6	□□□□□ -1.83
YKU70	YMR284W	YOR223W	Q12015	292 aa		3.6	□□□□□ -1.83
YKU70	YMR284W	KTR7	P40504	517 aa		3.59	□□□□□ -1.83
YKU70	YMR284W	PNS1	Q12412	539 aa		3.59	□□□□□ -1.83
YKU70	YMR284W	FUS1	P11710	512 aa		3.58	□□□□□ -1.84
YKU70	YMR284W	BOI1	P38041	980 aa	Known RBP	3.58	□□□□□ -1.84
YKU70	YMR284W	YJL007C	P47080	104 aa		3.58	□□□□□ -1.84
YKU70	YMR284W	CAB1	Q04430	367 aa		3.58	□□□□□ -1.84
YKU70	YMR284W	GPT2	P36148	743 aa		3.58	□□□□□ -1.84
YKU70	YMR284W	OYE3	P41816	400 aa	Predicted RBP	3.58	□□□□□ -1.84
YKU70	YMR284W	YMR074C	Q04773	145 aa		3.58	□□□□□ -1.84
YKU70	YMR284W	TRS33	Q99394	268 aa		3.58	□□□□□ -1.84
YKU70	YMR284W	TUB2	P02557	457 aa	Known RBP	3.57	□□□□□ -1.84
YKU70	YMR284W	FOX2	Q02207	900 aa	Known RBP	3.57	□□□□□ -1.84
YKU70	YMR284W	ROM1	P53046	1155 aa		3.56	□□□□□ -1.84
YKU70	YMR284W	RTG2	P32608	588 aa	Known RBP	3.55	□□□□□ -1.84
YKU70	YMR284W	MRPL22	P53881	309 aa		3.55	□□□□□ -1.84
YKU70	YMR284W	HAS1	Q03532	505 aa	Known RBP	3.55	□□□□□ -1.84
YKU70	YMR284W	YLL054C	Q12244	843 aa		3.55	□□□□□ -1.84
YKU70	YMR284W	RQC2	Q12532	1038 aa	Known RBP	3.55	□□□□□ -1.84
YKU70	YMR284W	MSN1	P22148	382 aa		3.54	□□□□□ -1.84
YKU70	YMR284W	RPL34B	P40525	121 aa	Known RBP	3.54	□□□□□ -1.84
YKU70	YMR284W	SSY1	Q03770	852 aa		3.54	□□□□□ -1.84
YKU70	YMR284W	EMG1	Q06287	252 aa	Known RBP	3.54	□□□□□ -1.84
YKU70	YMR284W	AIM46	P38885	310 aa		3.54	□□□□□ -1.84
YKU70	YMR284W	FIR1	P40020	876 aa		3.54	□□□□□ -1.84
YKU70	YMR284W	YJR124C	P47159	448 aa		3.54	□□□□□ -1.84
YKU70	YMR284W	TRE1	Q08919	783 aa		3.54	□□□□□ -1.84
YKU70	YMR284W	SOD2	P00447	233 aa		3.53	□□□□□ -1.84
YKU70	YMR284W	TOD6	P34219	525 aa		3.53	□□□□□ -1.84
YKU70	YMR284W	DOT1	Q04089	582 aa	Known RBP	3.53	□□□□□ -1.84
YKU70	YMR284W	YML122C	Q03207	126 aa		3.52	□□□□□ -1.85
YKU70	YMR284W	FET4	P40988	552 aa		3.51	□□□□□ -1.85
YKU70	YMR284W	LPX1	Q12405	387 aa	Known RBP	3.51	□□□□□ -1.85
YKU70	YMR284W	RPS4A	P0CX35	261 aa	Known RBP	3.51	□□□□□ -1.85
YKU70	YMR284W	RPS4B	P0CX36	261 aa	Known RBP	3.51	□□□□□ -1.85
YKU70	YMR284W	GAL2	P13181	574 aa		3.51	□□□□□ -1.85
YKU70	YMR284W	PRO1	P32264	428 aa		3.51	□□□□□ -1.85
YKU70	YMR284W	SHM2	P37291	469 aa	Known RBP	3.51	□□□□□ -1.85
YKU70	YMR284W	YBR197C	P38306	217 aa		3.51	□□□□□ -1.85
YKU70	YMR284W	CLU1	Q03690	1277 aa	Known RBP	3.51	□□□□□ -1.85
YKU70	YMR284W	TIF1	P10081	395 aa	Known RBP	3.5	□□□□□ -1.85
YKU70	YMR284W	SUV3	P32580	737 aa		3.5	□□□□□ -1.85
YKU70	YMR284W	BIM1	P40013	344 aa		3.49	□□□□□ -1.85
YKU70	YMR284W	YLR358C	O13565	187 aa		3.49	□□□□□ -1.85
YKU70	YMR284W	SIS2	P36024	562 aa		3.49	□□□□□ -1.85
YKU70	YMR284W	ATG32	P40458	529 aa		3.49	□□□□□ -1.85
YKU70	YMR284W	CTS1	P29029	562 aa		3.48	□□□□□ -1.85
YKU70	YMR284W	YPL277C	Q08989	487 aa		3.48	□□□□□ -1.85
YKU70	YMR284W	GLO4	Q12320	285 aa		3.48	□□□□□ -1.85
YKU70	YMR284W	HVG1	P0CE11	249 aa		3.47	□□□□□ -1.85
YKU70	YMR284W	ISC10	P32645	267 aa		3.47	□□□□□ -1.85
YKU70	YMR284W	PEX7	P39108	375 aa		3.47	□□□□□ -1.85
YKU70	YMR284W	YDL177C	Q12257	170 aa		3.47	□□□□□ -1.85
YKU70	YMR284W	RPS13	P05756	151 aa	Known RBP	3.46	□□□□□ -1.86
YKU70	YMR284W	PTC7	P38797	343 aa		3.45	□□□□□ -1.86
YKU70	YMR284W	HXT8	P40886	569 aa		3.45	□□□□□ -1.86
YKU70	YMR284W	ALT1	P52893	592 aa		3.45	□□□□□ -1.86
YKU70	YMR284W	YVC1	Q12324	675 aa		3.45	□□□□□ -1.86
YKU70	YMR284W	ETP1	P38748	585 aa	Known RBP	3.44	□□□□□ -1.86
YKU70	YMR284W	GCV1	P48015	400 aa		3.44	□□□□□ -1.86
YKU70	YMR284W	FOL2	P51601	243 aa	Known RBP	3.44	□□□□□ -1.86
YKU70	YMR284W	MSH4	P40965	878 aa	Predicted RBP	3.43	□□□□□ -1.86
YKU70	YMR284W	SNO2	P53823	222 aa		3.43	□□□□□ -1.86
YKU70	YMR284W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.42	□□□□□ -1.86	not detected
YKU70	YMR284W	GTS1	P40956	396 aa		3.42	□□□□□ -1.86
YKU70	YMR284W	RGD2	P43556	714 aa		3.42	□□□□□ -1.86
YKU70	YMR284W	ALD4	P46367	519 aa	Known RBP	3.42	□□□□□ -1.86
YKU70	YMR284W	EAR1	Q03212	550 aa		3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms