RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W APM2P38700 605 aa6.9□□□□□ -1.3
VPS36YLR417W NMD2P38798 1089 aaKnown RBP6.9□□□□□ -1.3
VPS36YLR417W RVS167P39743 482 aaKnown RBP6.9□□□□□ -1.3
VPS36YLR417W UBP15P50101 1230 aa6.9□□□□□ -1.3
VPS36YLR417W DOS2P54858 310 aa6.9□□□□□ -1.3
VPS36YLR417W ADI1Q03677 179 aa6.9□□□□□ -1.3
VPS36YLR417W MCM5P29496 775 aaKnown RBP6.9□□□□□ -1.31
VPS36YLR417W ITC1P53125 1264 aa6.9□□□□□ -1.31
VPS36YLR417W ULP1Q02724 621 aa6.9□□□□□ -1.31
VPS36YLR417W COBP00163 385 aa6.89□□□□□ -1.31
VPS36YLR417W SRP40P32583 406 aaPredicted RBP6.89□□□□□ -1.31
VPS36YLR417W BRN1P38170 754 aa6.89□□□□□ -1.31
VPS36YLR417W CDC34P14682 295 aa6.88□□□□□ -1.31
VPS36YLR417W PYC2P32327 1180 aaKnown RBP6.88□□□□□ -1.31
VPS36YLR417W TCB1Q12466 1186 aa6.87□□□□□ -1.31
VPS36YLR417W RPP1AP05318 106 aaPredicted RBP6.87□□□□□ -1.31
VPS36YLR417W UGA4P32837 571 aa6.87□□□□□ -1.31
VPS36YLR417W IOC3P43596 787 aa6.87□□□□□ -1.31
VPS36YLR417W SAP155P43612 1002 aa6.87□□□□□ -1.31
VPS36YLR417W MON1P53129 644 aa6.87□□□□□ -1.31
VPS36YLR417W YAF9P53930 226 aa6.87□□□□□ -1.31
VPS36YLR417W PMT7Q06644 662 aa6.87□□□□□ -1.31
VPS36YLR417W DUR3P33413 735 aa6.86□□□□□ -1.31
VPS36YLR417W YNR040WP53736 256 aa6.86□□□□□ -1.31
VPS36YLR417W GDE1Q02979 1223 aa6.86□□□□□ -1.31
VPS36YLR417W NSE3Q05541 303 aa6.86□□□□□ -1.31
VPS36YLR417W STI1P15705 589 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
VPS36YLR417W NCL1P38205 684 aaKnown RBP6.85□□□□□ -1.31
VPS36YLR417W PIC2P40035 300 aa6.85□□□□□ -1.31
VPS36YLR417W UBP2Q01476 1272 aa6.85□□□□□ -1.31
VPS36YLR417W SPC42P36094 363 aa6.84□□□□□ -1.31
VPS36YLR417W OSW7P43611 510 aa6.84□□□□□ -1.31
VPS36YLR417W YGR053CP53234 283 aa6.84□□□□□ -1.31
VPS36YLR417W RTT10Q08924 1013 aa6.84□□□□□ -1.31
VPS36YLR417W CDC19P00549 500 aaKnown RBP6.84□□□□□ -1.31
VPS36YLR417W DPS1P04802 557 aaKnown RBP6.84□□□□□ -1.31
VPS36YLR417W YKL091CP33324 310 aaKnown RBP6.84□□□□□ -1.31
VPS36YLR417W MRPL16P38064 232 aa6.84□□□□□ -1.31
VPS36YLR417W YER156CP40093 338 aaKnown RBP6.84□□□□□ -1.31
VPS36YLR417W FAA4P47912 694 aaKnown RBP6.84□□□□□ -1.31
VPS36YLR417W RNH70P53331 553 aa6.84□□□□□ -1.31
VPS36YLR417W DUT1P33317 147 aa6.83□□□□□ -1.32
VPS36YLR417W RSC2Q06488 889 aa6.83□□□□□ -1.32
VPS36YLR417W GCR1P07261 785 aa6.82□□□□□ -1.32
VPS36YLR417W GRX1P25373 110 aaKnown RBP6.82□□□□□ -1.32
VPS36YLR417W RIM11P38615 370 aa6.82□□□□□ -1.32
VPS36YLR417W RPN4Q03465 531 aa6.82□□□□□ -1.32
VPS36YLR417W YLR346CQ06139 101 aa6.82□□□□□ -1.32
VPS36YLR417W PRP5P21372 849 aaPredicted RBP6.81□□□□□ -1.32
VPS36YLR417W SQT1P35184 431 aa6.81□□□□□ -1.32
VPS36YLR417W TMA46Q12000 345 aaKnown RBP6.81□□□□□ -1.32
VPS36YLR417W RSM26P47141 266 aa6.81□□□□□ -1.32
VPS36YLR417W NOG1Q02892 647 aaKnown RBP6.81□□□□□ -1.32
VPS36YLR417W OPI10Q08202 246 aa6.81□□□□□ -1.32
VPS36YLR417W CDC53Q12018 815 aaKnown RBP6.81□□□□□ -1.32
VPS36YLR417W TAF13P11747 167 aa6.8□□□□□ -1.32
VPS36YLR417W NPR1P22211 790 aa6.8□□□□□ -1.32
VPS36YLR417W TAT2P38967 592 aa6.8□□□□□ -1.32
VPS36YLR417W PPT1P53043 513 aa6.8□□□□□ -1.32
VPS36YLR417W HEH2Q03281 663 aa6.8□□□□□ -1.32
VPS36YLR417W IOC4Q04213 475 aa6.8□□□□□ -1.32
VPS36YLR417W BDF2Q07442 638 aa6.8□□□□□ -1.32
VPS36YLR417W YOR131CQ12486 218 aa6.8□□□□□ -1.32
VPS36YLR417W CMR1Q12510 522 aaKnown RBP6.8□□□□□ -1.32
VPS36YLR417W CIT2P08679 460 aa6.79□□□□□ -1.32
VPS36YLR417W FUS1P11710 512 aa6.79□□□□□ -1.32
VPS36YLR417W OSH7P38755 437 aa6.79□□□□□ -1.32
VPS36YLR417W IDI1P15496 288 aa6.79□□□□□ -1.32
VPS36YLR417W RAD27P26793 382 aa6.79□□□□□ -1.32
VPS36YLR417W PPG1P32838 368 aa6.79□□□□□ -1.32
VPS36YLR417W PEX28P38848 579 aa6.79□□□□□ -1.32
VPS36YLR417W SHU2P38957 223 aa6.79□□□□□ -1.32
VPS36YLR417W XKS1P42826 600 aa6.79□□□□□ -1.32
VPS36YLR417W TDA5Q06417 326 aaKnown RBP6.79□□□□□ -1.32
VPS36YLR417W SEC23P15303 768 aaKnown RBP6.78□□□□□ -1.32
VPS36YLR417W SPF1P39986 1215 aaKnown RBP6.78□□□□□ -1.32
VPS36YLR417W BUD6P41697 788 aa6.78□□□□□ -1.32
VPS36YLR417W OPT2Q06593 877 aa6.78□□□□□ -1.32
VPS36YLR417W MRL1Q06815 381 aa6.78□□□□□ -1.32
VPS36YLR417W GLO4Q12320 285 aa6.78□□□□□ -1.32
VPS36YLR417W PRI2P20457 528 aa6.77□□□□□ -1.33
VPS36YLR417W GLY1P37303 387 aaKnown RBP6.77□□□□□ -1.33
VPS36YLR417W YGL140CP53120 1219 aa6.77□□□□□ -1.33
VPS36YLR417W NAN1Q02931 896 aaKnown RBP6.77□□□□□ -1.33
VPS36YLR417W TRK1P12685 1235 aa6.76□□□□□ -1.33
VPS36YLR417W RRP14P36080 434 aaKnown RBP6.76□□□□□ -1.33
VPS36YLR417W GNP1P48813 663 aa6.76□□□□□ -1.33
VPS36YLR417W KRE33P53914 1056 aaKnown RBP6.76□□□□□ -1.33
VPS36YLR417W PEX13P80667 386 aa6.76□□□□□ -1.33
VPS36YLR417W INP51P40559 946 aaKnown RBP6.76□□□□□ -1.33
VPS36YLR417W EEB1Q02891 456 aa6.76□□□□□ -1.33
VPS36YLR417W FAL1Q12099 399 aaKnown RBP6.76□□□□□ -1.33
VPS36YLR417W MSH3P25336 1018 aa6.75□□□□□ -1.33
VPS36YLR417W PBP2P38151 413 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
VPS36YLR417W KRI1P42846 591 aaKnown RBP6.75□□□□□ -1.33
VPS36YLR417W ENT3P47160 408 aa6.75□□□□□ -1.33
VPS36YLR417W HUL5P53119 910 aa6.75□□□□□ -1.33
VPS36YLR417W BIO5P53744 561 aaKnown RBP6.75□□□□□ -1.33
VPS36YLR417W NAM8Q00539 523 aaKnown RBP6.75□□□□□ -1.33
VPS36YLR417W GCR2Q01722 534 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms