RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	MSH6	Q03834	1242 aa		5.01	□□□□□ -1.61
VPS33	YLR396C	DUR3	P33413	735 aa		5.01	□□□□□ -1.61
VPS33	YLR396C	PAM1	P37304	830 aa	Known RBP	5.01	□□□□□ -1.61
VPS33	YLR396C	FYV10	P40492	516 aa		5.01	□□□□□ -1.61
VPS33	YLR396C	MRP10	O75012	95 aa		5	□□□□□ -1.61
VPS33	YLR396C	FUS1	P11710	512 aa		5	□□□□□ -1.61
VPS33	YLR396C	MET1	P36150	593 aa		5	□□□□□ -1.61
VPS33	YLR396C	ALD3	P54114	506 aa		5	□□□□□ -1.61
VPS33	YLR396C	YCS4	Q06156	1176 aa		5	□□□□□ -1.61
VPS33	YLR396C	OXR1	Q08952	273 aa		5	□□□□□ -1.61
VPS33	YLR396C	INP51	P40559	946 aa	Known RBP	5	□□□□□ -1.61
VPS33	YLR396C	JJJ3	P47138	172 aa		5	□□□□□ -1.61
VPS33	YLR396C	NUT1	P53114	1132 aa		5	□□□□□ -1.61
VPS33	YLR396C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
VPS33	YLR396C	ECM2	P38241	364 aa	Known RBP	4.99	□□□□□ -1.61
VPS33	YLR396C	SAP155	P43612	1002 aa		4.99	□□□□□ -1.61
VPS33	YLR396C	YJL181W	P46987	611 aa		4.99	□□□□□ -1.61
VPS33	YLR396C	HPF1	Q05164	967 aa		4.99	□□□□□ -1.61
VPS33	YLR396C	HXK1	P04806	485 aa	Known RBP	4.98	□□□□□ -1.61
VPS33	YLR396C	MCM2	P29469	868 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	RIM11	P38615	370 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	FAA3	P39002	694 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	YGR122W	P53272	402 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	BIO5	P53744	561 aa	Known RBP	4.98	□□□□□ -1.61
VPS33	YLR396C	SPR28	Q04921	423 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	GPM1	P00950	247 aa	Known RBP	4.98	□□□□□ -1.61
VPS33	YLR396C	HVG1	P0CE11	249 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	PDC5	P16467	563 aa	Known RBP	4.98	□□□□□ -1.61
VPS33	YLR396C	PRP40	P33203	583 aa	Known RBP	4.98	□□□□□ -1.61
VPS33	YLR396C	TFA2	P36145	328 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	DAL4	Q04895	635 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	GLO4	Q12320	285 aa		4.98	□□□□□ -1.61
VPS33	YLR396C	KNS1	P32350	737 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS33	YLR396C	AMN1	P38285	549 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS33	YLR396C	DPH6	Q12429	685 aa		4.97	□□□□□ -1.61
VPS33	YLR396C	RPS26A	P39938	119 aa	Known RBP	4.96	□□□□□ -1.61
VPS33	YLR396C	RPS26B	P39939	119 aa	Known RBP	4.96	□□□□□ -1.61
VPS33	YLR396C	MON1	P53129	644 aa		4.96	□□□□□ -1.61
VPS33	YLR396C	CMR1	Q12510	522 aa	Known RBP	4.96	□□□□□ -1.61
VPS33	YLR396C	CYC8	P14922	966 aa		4.96	□□□□□ -1.62
VPS33	YLR396C	PRP5	P21372	849 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS33	YLR396C	UGA4	P32837	571 aa		4.96	□□□□□ -1.62
VPS33	YLR396C	RVS167	P39743	482 aa	Known RBP	4.96	□□□□□ -1.62
VPS33	YLR396C	NOP7	P53261	605 aa	Known RBP	4.96	□□□□□ -1.62
VPS33	YLR396C	PMT7	Q06644	662 aa		4.96	□□□□□ -1.62
VPS33	YLR396C	SOG2	Q08817	791 aa		4.96	□□□□□ -1.62
VPS33	YLR396C	NPR1	P22211	790 aa		4.95	□□□□□ -1.62
VPS33	YLR396C	YJR124C	P47159	448 aa		4.95	□□□□□ -1.62
VPS33	YLR396C	YGR035C	P53222	116 aa		4.95	□□□□□ -1.62
VPS33	YLR396C	SVF1	Q05515	481 aa		4.95	□□□□□ -1.62
VPS33	YLR396C	YAF9	P53930	226 aa		4.95	□□□□□ -1.62
VPS33	YLR396C	RAD2	P07276	1031 aa		4.94	□□□□□ -1.62
VPS33	YLR396C	KAR2	P16474	682 aa	Known RBP	4.94	□□□□□ -1.62
VPS33	YLR396C	MCM5	P29496	775 aa	Known RBP	4.94	□□□□□ -1.62
VPS33	YLR396C	YNR065C	P53751	1116 aa		4.94	□□□□□ -1.62
VPS33	YLR396C	ULP1	Q02724	621 aa		4.94	□□□□□ -1.62
VPS33	YLR396C	YPL109C	Q02981	657 aa		4.94	□□□□□ -1.62
VPS33	YLR396C	RMD1	Q03441	430 aa		4.93	□□□□□ -1.62
VPS33	YLR396C	GIS4	Q04233	774 aa		4.93	□□□□□ -1.62
VPS33	YLR396C	NAR1	P23503	491 aa	Known RBP	4.93	□□□□□ -1.62
VPS33	YLR396C	LSB6	P42951	607 aa		4.93	□□□□□ -1.62
VPS33	YLR396C	GUP1	P53154	560 aa		4.93	□□□□□ -1.62
VPS33	YLR396C	ESF1	Q06344	628 aa	Known RBP	4.93	□□□□□ -1.62
VPS33	YLR396C	PRE9	P23638	258 aa	Known RBP	4.92	□□□□□ -1.62
VPS33	YLR396C	ADI1	Q03677	179 aa		4.92	□□□□□ -1.62
VPS33	YLR396C	MCD1	Q12158	566 aa		4.92	□□□□□ -1.62
VPS33	YLR396C	FET4	P40988	552 aa		4.92	□□□□□ -1.62
VPS33	YLR396C	SLP1	Q12232	587 aa		4.92	□□□□□ -1.62
VPS33	YLR396C	PGM2	P37012	569 aa	Known RBP	4.91	□□□□□ -1.62
VPS33	YLR396C	PIC2	P40035	300 aa		4.91	□□□□□ -1.62
VPS33	YLR396C	LEM3	P42838	414 aa		4.91	□□□□□ -1.62
VPS33	YLR396C	MRPS18	P42847	217 aa		4.91	□□□□□ -1.62
VPS33	YLR396C	SOK2	P53438	785 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS33	YLR396C	NOG1	Q02892	647 aa	Known RBP	4.91	□□□□□ -1.62
VPS33	YLR396C	PEP7	P32609	515 aa		4.9	□□□□□ -1.62
VPS33	YLR396C	MET10	P39692	1035 aa		4.9	□□□□□ -1.62
VPS33	YLR396C	YPL062W	Q02781	134 aa		4.9	□□□□□ -1.62
VPS33	YLR396C	HAS1	Q03532	505 aa	Known RBP	4.9	□□□□□ -1.62
VPS33	YLR396C	HTS1	P07263	546 aa	Known RBP	4.9	□□□□□ -1.63
VPS33	YLR396C	ALG14	P38242	237 aa		4.9	□□□□□ -1.63
VPS33	YLR396C	GIP2	P40036	548 aa		4.9	□□□□□ -1.63
VPS33	YLR396C	NEO1	P40527	1151 aa		4.89	□□□□□ -1.63
VPS33	YLR396C	NAP1	P25293	417 aa	Known RBP	4.88	□□□□□ -1.63
VPS33	YLR396C	TRK2	P28584	889 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	TED1	P40533	473 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	RSM26	P47141	266 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	JIP5	Q06214	492 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS33	YLR396C	NHA1	Q99271	985 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	SQT1	P35184	431 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	EXO5	P38289	585 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	PAN5	P38787	379 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	YIG1	Q08956	461 aa		4.88	□□□□□ -1.63
VPS33	YLR396C	MSH3	P25336	1018 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	PEX28	P38848	579 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	SPO71	Q03868	1245 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY4B-P	A0A0B7P3V8	1104 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-DR6	P0CX70	440 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-ER1	P0CX71	440 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-LR2	P0CX72	440 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms