RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	SUM1	P46676	1062 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	SHE4	P51534	789 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	CWH41	P53008	833 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	NSE3	Q05541	303 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	CSR1	Q06705	408 aa	Known RBP	4.61	□□□□□ -1.67
YSH1	YLR277C	HMI1	Q12039	706 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	YRR1	Q12172	810 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	STE11	P23561	717 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	POL4	P25615	582 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	RAD16	P31244	790 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	ANP1	P32629	500 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	ERC1	P38767	581 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	YER034W	P40022	185 aa	Known RBP	4.6	□□□□□ -1.67
YSH1	YLR277C	RIC1	P40395	1056 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	RTC4	P53850	401 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	PNG1	Q02890	363 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	RSM28	Q03430	361 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	SSQ1	Q05931	657 aa	Predicted RBP	4.6	□□□□□ -1.67
YSH1	YLR277C	GYP1	Q08484	637 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	TSR4	P25040	408 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
YSH1	YLR277C	YTA6	P40328	754 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	CST6	P40535	587 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	MPH1	P40562	993 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	SNZ1	Q03148	297 aa		4.6	□□□□□ -1.67
YSH1	YLR277C	PDI1	P17967	522 aa	Known RBP	4.59	□□□□□ -1.67
YSH1	YLR277C	RME1	P32338	300 aa	Known RBP	4.59	□□□□□ -1.67
YSH1	YLR277C	TBS1	P38114	1094 aa		4.59	□□□□□ -1.67
YSH1	YLR277C	TAF5	P38129	798 aa		4.59	□□□□□ -1.67
YSH1	YLR277C	OLA1	P38219	394 aa	Known RBP	4.59	□□□□□ -1.67
YSH1	YLR277C	ATG14	P38270	344 aa		4.59	□□□□□ -1.67
YSH1	YLR277C	GGA2	P38817	585 aa	Known RBP	4.59	□□□□□ -1.67
YSH1	YLR277C	STN1	P38960	494 aa		4.59	□□□□□ -1.67
YSH1	YLR277C	NDC80	P40460	691 aa		4.59	□□□□□ -1.67
YSH1	YLR277C	HOP2	P53187	214 aa		4.59	□□□□□ -1.67
YSH1	YLR277C	ADE12	P80210	433 aa	Known RBP	4.59	□□□□□ -1.67
YSH1	YLR277C	KAR1	P11927	433 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	SEC15	P22224	910 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	KTR1	P27810	393 aa	Known RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	DPH5	P32469	300 aa	Predicted RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	HIR2	P32480	875 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	SSZ1	P38788	538 aa	Known RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	SHC1	P39000	512 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	INP52	P50942	1183 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	YMR111C	Q04461	462 aa	Predicted RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	RNH1	Q04740	348 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	TUM1	Q08686	304 aa	Known RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	DPH6	Q12429	685 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	SEC39	Q12745	709 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	RTC1	Q08281	1341 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	NAT1	P12945	854 aa	Known RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	SMY1	P32364	656 aa	Known RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	RPN12	P32496	274 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	FUI1	P38196	639 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	UTP18	P40362	594 aa	Predicted RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	IRR1	P40541	1150 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	YRB1	P41920	201 aa	Known RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	LAM5	P43560	674 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	ATF2	P53296	535 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	RNH70	P53331	553 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	RNT1	Q02555	471 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	RPN4	Q03465	531 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	SUB2	Q07478	446 aa	Known RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	RRP36	Q12481	300 aa	Predicted RBP	4.58	□□□□□ -1.68
YSH1	YLR277C	YBL111C	Q3E7Y5	667 aa		4.58	□□□□□ -1.68
YSH1	YLR277C	PET494	P07390	489 aa	Predicted RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	PHO84	P25297	587 aa	Known RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	SPR3	P41901	512 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	SRB7	P47822	140 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	IST1	P53843	298 aa	Predicted RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	TFB3	Q03290	321 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	TAP42	Q04372	366 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	DBP9	Q06218	594 aa	Known RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	RAD50	P12753	1312 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	TUF1	P02992	437 aa	Known RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	SSB1	P11484	613 aa	Known RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	MER1	P16523	270 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
YSH1	YLR277C	SMY2	P32909	740 aa	Known RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	BUD2	P33314	1104 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	SAS3	P34218	831 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	SSB2	P40150	613 aa	Known RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	GCD10	P41814	478 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	MSN5	P52918	1224 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	ERB1	Q04660	807 aa	Known RBP	4.57	□□□□□ -1.68
YSH1	YLR277C	MMS1	Q06211	1407 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	TCB1	Q12466	1186 aa		4.57	□□□□□ -1.68
YSH1	YLR277C	HNM1	P19807	563 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	CDC3	P32457	520 aa	Known RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	RXT2	P38255	430 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	GLO3	P38682	493 aa	Known RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	OTU2	P38747	307 aa	Known RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	RRP8	P38961	392 aa	Known RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	DAS1	P47005	663 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	TIM54	P47045	478 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	ARO80	Q04052	950 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	VMS1	Q04311	632 aa	Known RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	SPP382	Q06411	708 aa	Predicted RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	CIR2	Q08822	631 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	PKC1	P24583	1151 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms