RNA–Protein interactions for RNA: YLR263W

RED1, Transcript of Protein component of the synaptonemal complex axial elements, yeast

Gene RED1, Length 2,484 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RED1	YLR263W	PIC2	P40035	300 aa		4.12	□□□□□ -1.75
RED1	YLR263W	OPI10	Q08202	246 aa		4.12	□□□□□ -1.75
RED1	YLR263W	TIF6	Q12522	245 aa	Known RBP	4.12	□□□□□ -1.75
RED1	YLR263W	MET6	P05694	767 aa	Known RBP	4.11	□□□□□ -1.75
RED1	YLR263W	PRI2	P20457	528 aa		4.11	□□□□□ -1.75
RED1	YLR263W	STE5	P32917	917 aa		4.11	□□□□□ -1.75
RED1	YLR263W	SCD5	P34758	872 aa		4.11	□□□□□ -1.75
RED1	YLR263W	YPL109C	Q02981	657 aa		4.11	□□□□□ -1.75
RED1	YLR263W	DAL4	Q04895	635 aa		4.11	□□□□□ -1.75
RED1	YLR263W	INP54	Q08227	384 aa	Known RBP	4.11	□□□□□ -1.75
RED1	YLR263W	OXR1	Q08952	273 aa		4.11	□□□□□ -1.75
RED1	YLR263W	WTM2	Q12206	467 aa		4.11	□□□□□ -1.75
RED1	YLR263W	SMC1	P32908	1225 aa		4.11	□□□□□ -1.75
RED1	YLR263W	ICP55	P40051	511 aa		4.11	□□□□□ -1.75
RED1	YLR263W	NTA1	P40354	457 aa		4.11	□□□□□ -1.75
RED1	YLR263W	LSB3	P43603	459 aa	Known RBP	4.11	□□□□□ -1.75
RED1	YLR263W	MSB3	P48566	633 aa	Predicted RBP	4.11	□□□□□ -1.75
RED1	YLR263W	CWC24	P53769	259 aa		4.11	□□□□□ -1.75
RED1	YLR263W	EEB1	Q02891	456 aa		4.11	□□□□□ -1.75
RED1	YLR263W	PUS5	Q06244	254 aa		4.11	□□□□□ -1.75
RED1	YLR263W	MSN1	P22148	382 aa		4.1	□□□□□ -1.75
RED1	YLR263W	PRP40	P33203	583 aa	Known RBP	4.1	□□□□□ -1.75
RED1	YLR263W	GNP1	P48813	663 aa		4.1	□□□□□ -1.75
RED1	YLR263W	YOR131C	Q12486	218 aa		4.1	□□□□□ -1.75
RED1	YLR263W	FLP1	P03870	423 aa		4.1	□□□□□ -1.75
RED1	YLR263W	KIP2	P28743	706 aa		4.1	□□□□□ -1.75
RED1	YLR263W	MCM5	P29496	775 aa	Known RBP	4.1	□□□□□ -1.75
RED1	YLR263W	GLY1	P37303	387 aa	Known RBP	4.1	□□□□□ -1.75
RED1	YLR263W	ACO2	P39533	789 aa		4.1	□□□□□ -1.75
RED1	YLR263W	TYW3	P53177	273 aa		4.1	□□□□□ -1.75
RED1	YLR263W	TPO2	P53283	614 aa		4.1	□□□□□ -1.75
RED1	YLR263W	MCD1	Q12158	566 aa		4.1	□□□□□ -1.75
RED1	YLR263W	CCP1	P00431	361 aa		4.09	□□□□□ -1.75
RED1	YLR263W	ERR1	P0CX10	437 aa		4.09	□□□□□ -1.75
RED1	YLR263W	ERR2	P0CX11	437 aa		4.09	□□□□□ -1.75
RED1	YLR263W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RED1	YLR263W	DUR3	P33413	735 aa		4.09	□□□□□ -1.75
RED1	YLR263W	YHL008C	P38750	627 aa		4.09	□□□□□ -1.75
RED1	YLR263W	RAD55	P38953	406 aa		4.09	□□□□□ -1.75
RED1	YLR263W	TDA5	Q06417	326 aa	Known RBP	4.09	□□□□□ -1.75
RED1	YLR263W	UTP4	Q06679	776 aa	Known RBP	4.09	□□□□□ -1.75
RED1	YLR263W	YOL057W	Q08225	711 aa		4.09	□□□□□ -1.75
RED1	YLR263W	YGR161W-C	Q3E744	92 aa		4.09	□□□□□ -1.75
RED1	YLR263W	GCR1	P07261	785 aa		4.09	□□□□□ -1.76
RED1	YLR263W	PHO8	P11491	566 aa		4.09	□□□□□ -1.76
RED1	YLR263W	YBL086C	P38177	466 aa		4.09	□□□□□ -1.76
RED1	YLR263W	PMC1	P38929	1173 aa	Predicted RBP	4.09	□□□□□ -1.76
RED1	YLR263W	PSY2	P40164	858 aa		4.09	□□□□□ -1.76
RED1	YLR263W	MRPS18	P42847	217 aa		4.09	□□□□□ -1.76
RED1	YLR263W	SUM1	P46676	1062 aa		4.09	□□□□□ -1.76
RED1	YLR263W	YGL081W	P53156	320 aa		4.09	□□□□□ -1.76
RED1	YLR263W	NAN1	Q02931	896 aa	Known RBP	4.09	□□□□□ -1.76
RED1	YLR263W	YCS4	Q06156	1176 aa		4.09	□□□□□ -1.76
RED1	YLR263W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RED1	YLR263W	MRT4	P33201	236 aa	Known RBP	4.08	□□□□□ -1.76
RED1	YLR263W	MKS1	P34072	584 aa		4.08	□□□□□ -1.76
RED1	YLR263W	UTP7	P40055	554 aa	Known RBP	4.08	□□□□□ -1.76
RED1	YLR263W	TPM2	P40414	161 aa		4.08	□□□□□ -1.76
RED1	YLR263W	TIM54	P47045	478 aa		4.08	□□□□□ -1.76
RED1	YLR263W	FLC1	Q08967	793 aa		4.08	□□□□□ -1.76
RED1	YLR263W	IRS4	P36115	615 aa	Known RBP	4.07	□□□□□ -1.76
RED1	YLR263W	RSP5	P39940	809 aa	Known RBP	4.07	□□□□□ -1.76
RED1	YLR263W	NUP85	P46673	744 aa		4.07	□□□□□ -1.76
RED1	YLR263W	PTK2	P47116	818 aa	Known RBP	4.07	□□□□□ -1.76
RED1	YLR263W	ULP1	Q02724	621 aa		4.07	□□□□□ -1.76
RED1	YLR263W	DAT1	P13483	248 aa	Known RBP	4.07	□□□□□ -1.76
RED1	YLR263W	MLF3	P32047	452 aa		4.07	□□□□□ -1.76
RED1	YLR263W	PFD1	P46988	109 aa		4.07	□□□□□ -1.76
RED1	YLR263W	DNM1	P54861	757 aa		4.07	□□□□□ -1.76
RED1	YLR263W	ADI1	Q03677	179 aa		4.07	□□□□□ -1.76
RED1	YLR263W	BUD21	Q08492	214 aa	Predicted RBP	4.07	□□□□□ -1.76
RED1	YLR263W	RPS31	P05759	152 aa	Known RBP	4.06	□□□□□ -1.76
RED1	YLR263W	RPC31	P17890	251 aa		4.06	□□□□□ -1.76
RED1	YLR263W	LDH1	P38139	375 aa		4.06	□□□□□ -1.76
RED1	YLR263W	CHZ1	P40019	153 aa	Predicted RBP	4.06	□□□□□ -1.76
RED1	YLR263W	YEN1	P40028	759 aa		4.06	□□□□□ -1.76
RED1	YLR263W	QDR2	P40474	542 aa		4.06	□□□□□ -1.76
RED1	YLR263W	OPT2	Q06593	877 aa		4.06	□□□□□ -1.76
RED1	YLR263W	Q0182	Q9ZZW1	134 aa		4.06	□□□□□ -1.76
RED1	YLR263W	HEM13	P11353	328 aa	Known RBP	4.06	□□□□□ -1.76
RED1	YLR263W	TBS1	P38114	1094 aa		4.06	□□□□□ -1.76
RED1	YLR263W	BSD2	P38356	321 aa		4.06	□□□□□ -1.76
RED1	YLR263W	ZDS1	P50111	915 aa	Known RBP	4.06	□□□□□ -1.76
RED1	YLR263W	UBP2	Q01476	1272 aa		4.06	□□□□□ -1.76
RED1	YLR263W	UTP14	Q04500	899 aa	Known RBP	4.06	□□□□□ -1.76
RED1	YLR263W	DFG5	Q05031	458 aa		4.06	□□□□□ -1.76
RED1	YLR263W	YLR125W	Q12138	136 aa		4.06	□□□□□ -1.76
RED1	YLR263W	SBP1	P10080	294 aa	Known RBP	4.05	□□□□□ -1.76
RED1	YLR263W	SHM1	P37292	490 aa	Predicted RBP	4.05	□□□□□ -1.76
RED1	YLR263W	HXT13	P39924	564 aa		4.05	□□□□□ -1.76
RED1	YLR263W	MSH4	P40965	878 aa	Predicted RBP	4.05	□□□□□ -1.76
RED1	YLR263W	LSC2	P53312	427 aa		4.05	□□□□□ -1.76
RED1	YLR263W	HXT17	P53631	564 aa		4.05	□□□□□ -1.76
RED1	YLR263W	HXT15	P54854	567 aa		4.05	□□□□□ -1.76
RED1	YLR263W	MSH6	Q03834	1242 aa		4.05	□□□□□ -1.76
RED1	YLR263W	ESC2	Q06340	456 aa		4.05	□□□□□ -1.76
RED1	YLR263W	DPH6	Q12429	685 aa		4.05	□□□□□ -1.76
RED1	YLR263W	ARG82	P07250	355 aa		4.05	□□□□□ -1.76
RED1	YLR263W	SEA4	P38164	1038 aa		4.05	□□□□□ -1.76
RED1	YLR263W	DYS1	P38791	387 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms