RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C UFD2P54860 961 aa8.29□□□□□ -1.08
SED5YLR026C BIO5P53744 561 aaKnown RBP8.28□□□□□ -1.08
SED5YLR026C TRS120Q04183 1289 aa8.28□□□□□ -1.08
SED5YLR026C FUS1P11710 512 aa8.27□□□□□ -1.09
SED5YLR026C PYC2P32327 1180 aaKnown RBP8.27□□□□□ -1.09
SED5YLR026C TY4B-PA0A0B7P3V8 1104 aa8.26□□□□□ -1.09
SED5YLR026C SLP1Q12232 587 aa8.26□□□□□ -1.09
SED5YLR026C TY4A-HQ6Q5P6 413 aa8.26□□□□□ -1.09
SED5YLR026C CTR9P89105 1077 aa8.25□□□□□ -1.09
SED5YLR026C RSC4Q02206 625 aa8.25□□□□□ -1.09
SED5YLR026C MNL2Q12205 849 aa8.25□□□□□ -1.09
SED5YLR026C FRT1Q99332 602 aa8.25□□□□□ -1.09
SED5YLR026C SOG2Q08817 791 aa8.24□□□□□ -1.09
SED5YLR026C YNL011CP53980 444 aa8.23□□□□□ -1.09
SED5YLR026C NUT2Q06213 157 aa8.23□□□□□ -1.09
SED5YLR026C PAN5P38787 379 aa8.22□□□□□ -1.09
SED5YLR026C COBP00163 385 aa8.21□□□□□ -1.1
SED5YLR026C AMN1P38285 549 aaPredicted RBP8.21□□□□□ -1.1
SED5YLR026C YJR124CP47159 448 aa8.21□□□□□ -1.1
SED5YLR026C GUP1P53154 560 aa8.21□□□□□ -1.1
SED5YLR026C GLO4Q12320 285 aa8.21□□□□□ -1.1
SED5YLR026C AI3P03877 415 aa8.2□□□□□ -1.1
SED5YLR026C SSF1P38789 453 aaPredicted RBP8.2□□□□□ -1.1
SED5YLR026C LSB6P42951 607 aa8.2□□□□□ -1.1
SED5YLR026C YNR065CP53751 1116 aa8.2□□□□□ -1.1
SED5YLR026C GPI13Q07830 1017 aa8.2□□□□□ -1.1
SED5YLR026C NEO1P40527 1151 aa8.19□□□□□ -1.1
SED5YLR026C SAC7P17121 654 aa8.18□□□□□ -1.1
SED5YLR026C YHL050CP38721 697 aa8.18□□□□□ -1.1
SED5YLR026C YHR219WP38900 624 aa8.18□□□□□ -1.1
SED5YLR026C CDC55Q00362 526 aa8.18□□□□□ -1.1
SED5YLR026C YPL034WQ03083 165 aa8.18□□□□□ -1.1
SED5YLR026C BSC2Q05611 235 aa8.18□□□□□ -1.1
SED5YLR026C SFA1P32771 386 aa8.17□□□□□ -1.1
SED5YLR026C DUR3P33413 735 aa8.17□□□□□ -1.1
SED5YLR026C ECM2P38241 364 aaKnown RBP8.17□□□□□ -1.1
SED5YLR026C TY1A-NL1Q12391 440 aaKnown RBP8.17□□□□□ -1.1
SED5YLR026C HVG1P0CE11 249 aa8.16□□□□□ -1.1
SED5YLR026C HAS1Q03532 505 aaKnown RBP8.16□□□□□ -1.1
SED5YLR026C YHL008CP38750 627 aa8.15□□□□□ -1.1
SED5YLR026C POL5P39985 1022 aaKnown RBP8.15□□□□□ -1.1
SED5YLR026C LEM3P42838 414 aa8.15□□□□□ -1.1
SED5YLR026C DSE4P53753 1117 aa8.15□□□□□ -1.1
SED5YLR026C SBP1P10080 294 aaKnown RBP8.13□□□□□ -1.11
SED5YLR026C FET4P40988 552 aa8.13□□□□□ -1.11
SED5YLR026C ARI1P53111 347 aaKnown RBP8.13□□□□□ -1.11
SED5YLR026C SPO71Q03868 1245 aa8.13□□□□□ -1.11
SED5YLR026C FLP1P03870 423 aa8.12□□□□□ -1.11
SED5YLR026C INP54Q08227 384 aaKnown RBP8.12□□□□□ -1.11
SED5YLR026C ERS1P17261 260 aa8.11□□□□□ -1.11
SED5YLR026C RSC6P25632 483 aa8.11□□□□□ -1.11
SED5YLR026C RIM11P38615 370 aa8.11□□□□□ -1.11
SED5YLR026C ELG1Q12050 791 aa8.11□□□□□ -1.11
SED5YLR026C CMR1Q12510 522 aaKnown RBP8.11□□□□□ -1.11
SED5YLR026C NPR1P22211 790 aa8.1□□□□□ -1.11
SED5YLR026C MAE1P36013 669 aaKnown RBP8.1□□□□□ -1.11
SED5YLR026C STM1P39015 273 aaKnown RBP8.09□□□□□ -1.11
SED5YLR026C GLT1Q12680 2145 aaKnown RBP8.08□□□□□ -1.12
SED5YLR026C MSH6Q03834 1242 aa8.08□□□□□ -1.12
SED5YLR026C NOC3Q07896 663 aaPredicted RBP8.08□□□□□ -1.12
SED5YLR026C NUT1P53114 1132 aa8.07□□□□□ -1.12
SED5YLR026C MON1P53129 644 aa8.07□□□□□ -1.12
SED5YLR026C MSC6Q08818 692 aaKnown RBP8.07□□□□□ -1.12
SED5YLR026C NAM7P30771 971 aaKnown RBP8.06□□□□□ -1.12
SED5YLR026C PGM1P33401 570 aaKnown RBP8.06□□□□□ -1.12
SED5YLR026C AKR1P39010 764 aa8.06□□□□□ -1.12
SED5YLR026C THI12P42883 340 aa8.06□□□□□ -1.12
SED5YLR026C THI5P43534 340 aa8.06□□□□□ -1.12
SED5YLR026C THI11P47183 340 aa8.06□□□□□ -1.12
SED5YLR026C SAM37P50110 327 aa8.06□□□□□ -1.12
SED5YLR026C KIP3P53086 805 aaKnown RBP8.06□□□□□ -1.12
SED5YLR026C THI13Q07748 340 aa8.06□□□□□ -1.12
SED5YLR026C REC8Q12188 680 aa8.06□□□□□ -1.12
SED5YLR026C COQ2P32378 372 aa8.05□□□□□ -1.12
SED5YLR026C WHI5Q12416 295 aa8.05□□□□□ -1.12
SED5YLR026C HTS1P07263 546 aaKnown RBP8.04□□□□□ -1.12
SED5YLR026C PRP5P21372 849 aaPredicted RBP8.04□□□□□ -1.12
SED5YLR026C IPL1P38991 367 aa8.04□□□□□ -1.12
SED5YLR026C NCE103P53615 221 aa8.04□□□□□ -1.12
SED5YLR026C YMR074CQ04773 145 aa8.04□□□□□ -1.12
SED5YLR026C MET4P32389 672 aa8.03□□□□□ -1.12
SED5YLR026C PPX1P38698 397 aa8.03□□□□□ -1.12
SED5YLR026C MCM5P29496 775 aaKnown RBP8.02□□□□□ -1.13
SED5YLR026C CIC1P38779 376 aaKnown RBP8.02□□□□□ -1.13
SED5YLR026C FAR11P53917 953 aa8.02□□□□□ -1.13
SED5YLR026C YAF9P53930 226 aa8.02□□□□□ -1.13
SED5YLR026C PMT7Q06644 662 aa8.02□□□□□ -1.13
SED5YLR026C PHO4P07270 312 aaKnown RBP8.01□□□□□ -1.13
SED5YLR026C SAP155P43612 1002 aa8.01□□□□□ -1.13
SED5YLR026C ALO1P54783 526 aaKnown RBP8.01□□□□□ -1.13
SED5YLR026C SAF1P38352 637 aa8□□□□□ -1.13
SED5YLR026C SEN54Q02825 467 aaPredicted RBP8□□□□□ -1.13
SED5YLR026C YLR122CQ12312 125 aa8□□□□□ -1.13
SED5YLR026C RVS167P39743 482 aaKnown RBP7.99□□□□□ -1.13
SED5YLR026C YCS4Q06156 1176 aa7.99□□□□□ -1.13
SED5YLR026C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13 RIP-Chip
SED5YLR026C YIG1Q08956 461 aa7.99□□□□□ -1.13
SED5YLR026C KAE1P36132 386 aa7.98□□□□□ -1.13
SED5YLR026C DAK2P43550 591 aa7.97□□□□□ -1.13
SED5YLR026C UTP22P53254 1237 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms