RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C VMA3P25515 160 aa9.47□□□□□ -0.89
SKG1YKR100C SPP41P38904 1435 aa9.47□□□□□ -0.89
SKG1YKR100C GPM1P00950 247 aaKnown RBP9.46□□□□□ -0.9
SKG1YKR100C AI1P03875 834 aa9.46□□□□□ -0.9
SKG1YKR100C RPC31P17890 251 aa9.46□□□□□ -0.9
SKG1YKR100C MDJ1P35191 511 aa9.46□□□□□ -0.9
SKG1YKR100C PNP1Q05788 311 aa9.46□□□□□ -0.9
SKG1YKR100C TOP2P06786 1428 aaKnown RBP9.46□□□□□ -0.9
SKG1YKR100C TRM3Q07527 1436 aa9.46□□□□□ -0.9
SKG1YKR100C THI72Q08579 599 aa9.44□□□□□ -0.9
SKG1YKR100C YFL066CP43538 392 aa9.43□□□□□ -0.9
SKG1YKR100C NCL1P38205 684 aaKnown RBP9.42□□□□□ -0.9
SKG1YKR100C YNR040WP53736 256 aa9.42□□□□□ -0.9
SKG1YKR100C NSG2P53898 299 aa9.42□□□□□ -0.9
SKG1YKR100C PDC5P16467 563 aaKnown RBP9.41□□□□□ -0.9
SKG1YKR100C NAB2P32505 525 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
SKG1YKR100C APM2P38700 605 aa9.4□□□□□ -0.9
SKG1YKR100C DYS1P38791 387 aa9.4□□□□□ -0.9
SKG1YKR100C ICP55P40051 511 aa9.4□□□□□ -0.9
SKG1YKR100C HEH2Q03281 663 aa9.4□□□□□ -0.9
SKG1YKR100C KNS1P32350 737 aaPredicted RBP9.39□□□□□ -0.91
SKG1YKR100C LDH1P38139 375 aa9.39□□□□□ -0.91
SKG1YKR100C SBE2P42223 864 aaKnown RBP9.39□□□□□ -0.91
SKG1YKR100C RPL34AP87262 121 aaPredicted RBP9.38□□□□□ -0.91
SKG1YKR100C PHM7Q12252 991 aa9.38□□□□□ -0.91
SKG1YKR100C BSD2P38356 321 aa9.37□□□□□ -0.91
SKG1YKR100C YOR296WQ08748 1289 aa9.37□□□□□ -0.91
SKG1YKR100C RRN6P32786 894 aa9.36□□□□□ -0.91
SKG1YKR100C BOI1P38041 980 aaKnown RBP9.36□□□□□ -0.91
SKG1YKR100C PRK1P40494 810 aa9.36□□□□□ -0.91
SKG1YKR100C SSA1P10591 642 aaKnown RBP9.35□□□□□ -0.91
SKG1YKR100C ITC1P53125 1264 aa9.35□□□□□ -0.91
SKG1YKR100C GIP1P38229 639 aa9.34□□□□□ -0.91
SKG1YKR100C YNR014WP53719 212 aa9.34□□□□□ -0.91
SKG1YKR100C PUS1Q12211 544 aaKnown RBP9.34□□□□□ -0.91
SKG1YKR100C SNT2P53127 1403 aa9.33□□□□□ -0.92
SKG1YKR100C GDB1Q06625 1536 aa9.33□□□□□ -0.92
SKG1YKR100C BOL3P39724 118 aa9.33□□□□□ -0.92
SKG1YKR100C MSN1P22148 382 aa9.32□□□□□ -0.92
SKG1YKR100C TDA6Q06466 467 aa9.32□□□□□ -0.92
SKG1YKR100C LSO1Q3E827 93 aa9.32□□□□□ -0.92
SKG1YKR100C FUR4P05316 633 aaKnown RBP9.31□□□□□ -0.92
SKG1YKR100C APC11Q12157 165 aa9.31□□□□□ -0.92
SKG1YKR100C IDI1P15496 288 aa9.3□□□□□ -0.92
SKG1YKR100C KTR2P33550 425 aa9.3□□□□□ -0.92
SKG1YKR100C ISW1P38144 1129 aa9.3□□□□□ -0.92
SKG1YKR100C BOI2P39969 1040 aa9.3□□□□□ -0.92
SKG1YKR100C MAK10Q02197 733 aa9.3□□□□□ -0.92
SKG1YKR100C MTC5Q03897 1148 aa9.3□□□□□ -0.92
SKG1YKR100C MET1P36150 593 aa9.29□□□□□ -0.92
SKG1YKR100C HXT8P40886 569 aa9.29□□□□□ -0.92
SKG1YKR100C SUT1P53032 299 aaKnown RBP9.29□□□□□ -0.92
SKG1YKR100C VTH1P40438 1549 aa9.28□□□□□ -0.92
SKG1YKR100C VTH2P40890 1549 aa9.28□□□□□ -0.92
SKG1YKR100C RPB10P22139 70 aa9.28□□□□□ -0.92
SKG1YKR100C YER156CP40093 338 aaKnown RBP9.28□□□□□ -0.92
SKG1YKR100C CHC1P22137 1653 aaKnown RBP9.26□□□□□ -0.93
SKG1YKR100C BNR1P40450 1375 aa9.26□□□□□ -0.93
SKG1YKR100C MRP10O75012 95 aa9.26□□□□□ -0.93
SKG1YKR100C KAR5Q04746 504 aa9.26□□□□□ -0.93
SKG1YKR100C TSC11P40061 1430 aa9.25□□□□□ -0.93
SKG1YKR100C MCX1P38323 520 aaPredicted RBP9.25□□□□□ -0.93
SKG1YKR100C FIR1P40020 876 aa9.25□□□□□ -0.93
SKG1YKR100C YPR053CQ6Q5F3 151 aa9.25□□□□□ -0.93
SKG1YKR100C PGM2P37012 569 aaKnown RBP9.24□□□□□ -0.93
SKG1YKR100C MET10P39692 1035 aa9.24□□□□□ -0.93
SKG1YKR100C YIL165CP40446 119 aa9.24□□□□□ -0.93
SKG1YKR100C TAF7Q05021 590 aa9.24□□□□□ -0.93
SKG1YKR100C IQG1Q12280 1495 aa9.23□□□□□ -0.93
SKG1YKR100C NAR1P23503 491 aaKnown RBP9.23□□□□□ -0.93
SKG1YKR100C GEF1P37020 779 aa9.23□□□□□ -0.93
SKG1YKR100C ALG14P38242 237 aa9.23□□□□□ -0.93
SKG1YKR100C RGD2P43556 714 aa9.23□□□□□ -0.93
SKG1YKR100C YMR187CQ03236 431 aa9.23□□□□□ -0.93
SKG1YKR100C EMG1Q06287 252 aaKnown RBP9.22□□□□□ -0.93
SKG1YKR100C GLO3P38682 493 aaKnown RBP9.21□□□□□ -0.94
SKG1YKR100C GIS4Q04233 774 aa9.21□□□□□ -0.94
SKG1YKR100C NHA1Q99271 985 aa9.21□□□□□ -0.94
SKG1YKR100C PPT1P53043 513 aa9.2□□□□□ -0.94
SKG1YKR100C MLP2P40457 1679 aa9.2□□□□□ -0.94
SKG1YKR100C CDC3P32457 520 aaKnown RBP9.19□□□□□ -0.94
SKG1YKR100C YBR287WP38355 427 aa9.19□□□□□ -0.94
SKG1YKR100C NTA1P40354 457 aa9.19□□□□□ -0.94
SKG1YKR100C LSB3P43603 459 aaKnown RBP9.19□□□□□ -0.94
SKG1YKR100C RSC2Q06488 889 aa9.19□□□□□ -0.94
SKG1YKR100C YCK2P23292 546 aaKnown RBP9.18□□□□□ -0.94
SKG1YKR100C AIM46P38885 310 aa9.18□□□□□ -0.94
SKG1YKR100C SKN7P38889 622 aa9.18□□□□□ -0.94
SKG1YKR100C RAD55P38953 406 aa9.18□□□□□ -0.94
SKG1YKR100C QDR1P40475 563 aa9.18□□□□□ -0.94
SKG1YKR100C YDR215CQ12240 137 aa9.18□□□□□ -0.94
SKG1YKR100C BUD3P25558 1636 aa9.17□□□□□ -0.94
SKG1YKR100C SMC1P32908 1225 aa9.17□□□□□ -0.94
SKG1YKR100C THI12P42883 340 aa9.17□□□□□ -0.94
SKG1YKR100C THI5P43534 340 aa9.17□□□□□ -0.94
SKG1YKR100C YJL181WP46987 611 aa9.17□□□□□ -0.94
SKG1YKR100C THI11P47183 340 aa9.17□□□□□ -0.94
SKG1YKR100C THI13Q07748 340 aa9.17□□□□□ -0.94
SKG1YKR100C TIF6Q12522 245 aaKnown RBP9.17□□□□□ -0.94
SKG1YKR100C YAP3P38749 330 aa9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms