RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C SEC14P24280 304 aaKnown RBP5.49□□□□□ -1.53
CAF4YKR036C TTI1P36097 1038 aa5.49□□□□□ -1.53
CAF4YKR036C NSE3Q05541 303 aa5.49□□□□□ -1.53
CAF4YKR036C MDM38Q08179 573 aa5.49□□□□□ -1.53
CAF4YKR036C GRX6Q12438 231 aa5.49□□□□□ -1.53
CAF4YKR036C TRS33Q99394 268 aa5.49□□□□□ -1.53
CAF4YKR036C FRS2P15625 503 aaKnown RBP5.48□□□□□ -1.53
CAF4YKR036C RTG2P32608 588 aaKnown RBP5.48□□□□□ -1.53
CAF4YKR036C OLA1P38219 394 aaKnown RBP5.48□□□□□ -1.53
CAF4YKR036C RGD1P38339 666 aa5.48□□□□□ -1.53
CAF4YKR036C YSH1Q06224 779 aaPredicted RBP5.48□□□□□ -1.53
CAF4YKR036C YVC1Q12324 675 aa5.48□□□□□ -1.53
CAF4YKR036C CAF20P12962 161 aaKnown RBP5.48□□□□□ -1.53
CAF4YKR036C DPH5P32469 300 aaPredicted RBP5.48□□□□□ -1.53
CAF4YKR036C RFC5P38251 354 aa5.48□□□□□ -1.53
CAF4YKR036C PUP2P32379 260 aa5.47□□□□□ -1.53
CAF4YKR036C TPS3P38426 1054 aaKnown RBP5.47□□□□□ -1.53
CAF4YKR036C SAP1P39955 897 aaKnown RBP5.47□□□□□ -1.53
CAF4YKR036C MGA2P40578 1113 aa5.47□□□□□ -1.53
CAF4YKR036C RSC8P43609 557 aaKnown RBP5.47□□□□□ -1.53
CAF4YKR036C DNM1P54861 757 aa5.47□□□□□ -1.53
CAF4YKR036C SRC1Q03707 834 aa5.47□□□□□ -1.53
CAF4YKR036C SLP1Q12232 587 aa5.47□□□□□ -1.53
CAF4YKR036C ARG8P18544 423 aa5.46□□□□□ -1.53
CAF4YKR036C SLD2P34252 453 aa5.46□□□□□ -1.53
CAF4YKR036C NDC80P40460 691 aa5.46□□□□□ -1.53
CAF4YKR036C HOT1Q03213 719 aa5.46□□□□□ -1.53
CAF4YKR036C YLR278CQ05854 1341 aa5.46□□□□□ -1.54
CAF4YKR036C DCD1P06773 312 aa5.46□□□□□ -1.54
CAF4YKR036C PET123P17558 318 aa5.46□□□□□ -1.54
CAF4YKR036C RRP14P36080 434 aaKnown RBP5.46□□□□□ -1.54
CAF4YKR036C MUD2P36084 527 aaKnown RBP5.46□□□□□ -1.54
CAF4YKR036C SYF1Q04048 859 aaPredicted RBP5.46□□□□□ -1.54
CAF4YKR036C HAT1Q12341 374 aa5.46□□□□□ -1.54
CAF4YKR036C UTP10P42945 1769 aaKnown RBP5.46□□□□□ -1.54
CAF4YKR036C MSM1P22438 575 aa5.45□□□□□ -1.54
CAF4YKR036C FRD1P32614 470 aaKnown RBP5.45□□□□□ -1.54
CAF4YKR036C APL2P36000 726 aaPredicted RBP5.45□□□□□ -1.54
CAF4YKR036C YNG2P38806 282 aaKnown RBP5.45□□□□□ -1.54
CAF4YKR036C DUS1P53759 423 aaKnown RBP5.45□□□□□ -1.54
CAF4YKR036C UBP16Q02863 499 aa5.45□□□□□ -1.54
CAF4YKR036C RRB1Q04225 511 aaKnown RBP5.45□□□□□ -1.54
CAF4YKR036C SGD1Q06132 899 aa5.45□□□□□ -1.54
CAF4YKR036C ARD1P07347 238 aaPredicted RBP5.44□□□□□ -1.54
CAF4YKR036C CDC16P09798 840 aa5.44□□□□□ -1.54
CAF4YKR036C TIF4632P39936 914 aaKnown RBP5.44□□□□□ -1.54
CAF4YKR036C VHR2P40041 505 aa5.44□□□□□ -1.54
CAF4YKR036C IAH1P41734 238 aa5.44□□□□□ -1.54
CAF4YKR036C YJR142WP47173 342 aa5.44□□□□□ -1.54
CAF4YKR036C SAS4Q04003 481 aa5.44□□□□□ -1.54
CAF4YKR036C YDR338CQ05497 695 aa5.44□□□□□ -1.54
CAF4YKR036C YPR204WQ08995 1032 aa5.44□□□□□ -1.54
CAF4YKR036C ATG9Q12142 997 aa5.44□□□□□ -1.54
CAF4YKR036C DDP1Q99321 188 aaKnown RBP5.44□□□□□ -1.54
CAF4YKR036C SSK22P25390 1331 aaPredicted RBP5.44□□□□□ -1.54
CAF4YKR036C RPL19AP0CX82 189 aaKnown RBP5.44□□□□□ -1.54
CAF4YKR036C RPL19BP0CX83 189 aaPredicted RBP5.44□□□□□ -1.54
CAF4YKR036C KAR3P17119 729 aa5.44□□□□□ -1.54
CAF4YKR036C RPC82P32349 654 aa5.44□□□□□ -1.54
CAF4YKR036C ZDS1P50111 915 aaKnown RBP5.44□□□□□ -1.54
CAF4YKR036C DPL1Q05567 589 aa5.44□□□□□ -1.54
CAF4YKR036C SFH1Q06168 426 aa5.44□□□□□ -1.54
CAF4YKR036C RLP24Q07915 199 aaKnown RBP5.44□□□□□ -1.54
CAF4YKR036C MCM16Q12262 181 aa5.44□□□□□ -1.54
CAF4YKR036C MRPS28P21771 286 aa5.43□□□□□ -1.54
CAF4YKR036C DAL7P21826 554 aa5.43□□□□□ -1.54
CAF4YKR036C GLC3P32775 704 aa5.43□□□□□ -1.54
CAF4YKR036C YME2P32843 850 aa5.43□□□□□ -1.54
CAF4YKR036C RRP1P35178 278 aaPredicted RBP5.43□□□□□ -1.54
CAF4YKR036C HEL1P36113 551 aa5.43□□□□□ -1.54
CAF4YKR036C PCH2P38126 564 aa5.43□□□□□ -1.54
CAF4YKR036C SEC26P41810 973 aaKnown RBP5.43□□□□□ -1.54
CAF4YKR036C APL5Q08951 932 aaKnown RBP5.43□□□□□ -1.54
CAF4YKR036C MAK11P20484 414 aaKnown RBP5.42□□□□□ -1.54
CAF4YKR036C PSO2P30620 661 aa5.42□□□□□ -1.54
CAF4YKR036C PRX1P34227 261 aaKnown RBP5.42□□□□□ -1.54
CAF4YKR036C ETP1P38748 585 aaKnown RBP5.42□□□□□ -1.54
CAF4YKR036C MAM1P40065 302 aa5.42□□□□□ -1.54
CAF4YKR036C FET4P40988 552 aa5.42□□□□□ -1.54
CAF4YKR036C STR2P47164 639 aa5.42□□□□□ -1.54
CAF4YKR036C SPO1P53541 631 aa5.42□□□□□ -1.54
CAF4YKR036C SPO19Q03029 223 aa5.42□□□□□ -1.54
CAF4YKR036C VPS64Q03944 604 aa5.42□□□□□ -1.54
CAF4YKR036C CSI1Q04368 295 aa5.42□□□□□ -1.54
CAF4YKR036C NDL1Q06568 189 aa5.42□□□□□ -1.54
CAF4YKR036C AIM7Q12156 149 aa5.42□□□□□ -1.54
CAF4YKR036C PMD1P32634 1753 aa5.42□□□□□ -1.54
CAF4YKR036C VAS1P07806 1104 aaKnown RBP5.42□□□□□ -1.54
CAF4YKR036C UBC1P21734 215 aaKnown RBP5.42□□□□□ -1.54
CAF4YKR036C DPB3P27344 201 aa5.42□□□□□ -1.54
CAF4YKR036C RAD16P31244 790 aa5.42□□□□□ -1.54
CAF4YKR036C FYV10P40492 516 aa5.42□□□□□ -1.54
CAF4YKR036C OSW7P43611 510 aa5.42□□□□□ -1.54
CAF4YKR036C YGL242CP53066 181 aa5.42□□□□□ -1.54
CAF4YKR036C RBA50Q04418 439 aa5.42□□□□□ -1.54
CAF4YKR036C OMS1Q06668 471 aa5.42□□□□□ -1.54
CAF4YKR036C APL4Q12028 832 aa5.42□□□□□ -1.54
CAF4YKR036C GPA1P08539 472 aa5.41□□□□□ -1.54
CAF4YKR036C PRP16P15938 1071 aaPredicted RBP5.41□□□□□ -1.54
CAF4YKR036C RPO26P20435 155 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms