RNA–Protein interactions for RNA: YKL116C

PRR1, Transcript of Serine/threonine protein kinase, yeast

Gene PRR1, Length 1,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRR1	YKL116C	DPH6	Q12429	685 aa		5.84	□□□□□ -1.48
PRR1	YKL116C	TRS33	Q99394	268 aa		5.84	□□□□□ -1.48
PRR1	YKL116C	CHO2	P05374	869 aa	Known RBP	5.83	□□□□□ -1.48
PRR1	YKL116C	CAF20	P12962	161 aa	Known RBP	5.83	□□□□□ -1.48
PRR1	YKL116C	COQ1	P18900	473 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	MAL33	P38157	468 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	RFC5	P38251	354 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	TOS1	P38288	455 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	RPT4	P53549	437 aa	Known RBP	5.83	□□□□□ -1.48
PRR1	YKL116C	HDA1	P53973	706 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	CTR9	P89105	1077 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	BDF2	Q07442	638 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	PSK2	Q08217	1101 aa		5.83	□□□□□ -1.48
PRR1	YKL116C	SSF2	Q12153	453 aa	Predicted RBP	5.83	□□□□□ -1.48
PRR1	YKL116C	UBP1	P25037	809 aa		5.82	□□□□□ -1.48
PRR1	YKL116C	GLN1	P32288	370 aa	Known RBP	5.82	□□□□□ -1.48
PRR1	YKL116C	BUD6	P41697	788 aa		5.82	□□□□□ -1.48
PRR1	YKL116C	ALD3	P54114	506 aa		5.82	□□□□□ -1.48
PRR1	YKL116C	SYF1	Q04048	859 aa	Predicted RBP	5.82	□□□□□ -1.48
PRR1	YKL116C	ATE1	P16639	503 aa		5.81	□□□□□ -1.48
PRR1	YKL116C	RPT3	P33298	428 aa	Known RBP	5.81	□□□□□ -1.48
PRR1	YKL116C	RER2	P35196	286 aa		5.81	□□□□□ -1.48
PRR1	YKL116C	MRPL10	P36520	322 aa		5.81	□□□□□ -1.48
PRR1	YKL116C	YHL050C	P38721	697 aa		5.81	□□□□□ -1.48
PRR1	YKL116C	CRG1	P38892	291 aa	RIP-Chip data	5.81	□□□□□ -1.48	not detected
PRR1	YKL116C	ENP2	P48234	707 aa	Known RBP	5.81	□□□□□ -1.48
PRR1	YKL116C	IRC4	Q03036	179 aa		5.81	□□□□□ -1.48
PRR1	YKL116C	SPN1	Q06505	410 aa	Predicted RBP	5.81	□□□□□ -1.48
PRR1	YKL116C	DIB1	Q06819	143 aa	Predicted RBP	5.81	□□□□□ -1.48
PRR1	YKL116C	GPA1	P08539	472 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	DIT2	P21595	489 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	LCB1	P25045	558 aa	Known RBP	5.8	□□□□□ -1.48
PRR1	YKL116C	FRD1	P32614	470 aa	Known RBP	5.8	□□□□□ -1.48
PRR1	YKL116C	AKR1	P39010	764 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	YER130C	P39959	443 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	PTK2	P47116	818 aa	Known RBP	5.8	□□□□□ -1.48
PRR1	YKL116C	SGD1	Q06132	899 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	EST2	Q06163	884 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	DDP1	Q99321	188 aa	Known RBP	5.8	□□□□□ -1.48
PRR1	YKL116C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.8	□□□□□ -1.48	not detected
PRR1	YKL116C	PTK1	P36002	662 aa	Predicted RBP	5.8	□□□□□ -1.48
PRR1	YKL116C	MIC60	P36112	540 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	RPN1	P38764	993 aa	Known RBP	5.8	□□□□□ -1.48
PRR1	YKL116C	FYV10	P40492	516 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	UFD2	P54860	961 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	HPC2	Q01448	625 aa		5.8	□□□□□ -1.48
PRR1	YKL116C	VMS1	Q04311	632 aa	Known RBP	5.8	□□□□□ -1.48
PRR1	YKL116C	SES1	P07284	462 aa	Known RBP	5.79	□□□□□ -1.48
PRR1	YKL116C	HCA4	P20448	770 aa	Known RBP	5.79	□□□□□ -1.48
PRR1	YKL116C	MCM4	P30665	933 aa	Known RBP	5.79	□□□□□ -1.48
PRR1	YKL116C	RPN10	P38886	268 aa	Known RBP	5.79	□□□□□ -1.48
PRR1	YKL116C	RRP8	P38961	392 aa	Known RBP	5.79	□□□□□ -1.48
PRR1	YKL116C	NUG1	P40010	520 aa	Known RBP	5.79	□□□□□ -1.48
PRR1	YKL116C	SET4	P42948	560 aa		5.79	□□□□□ -1.48
PRR1	YKL116C	IOC3	P43596	787 aa		5.79	□□□□□ -1.48
PRR1	YKL116C	YPT11	P48559	417 aa		5.79	□□□□□ -1.48
PRR1	YKL116C	SAS4	Q04003	481 aa		5.79	□□□□□ -1.48
PRR1	YKL116C	TOS4	Q06266	489 aa		5.79	□□□□□ -1.48
PRR1	YKL116C	TFC6	Q06339	672 aa		5.79	□□□□□ -1.48
PRR1	YKL116C	CYB2	P00175	591 aa		5.78	□□□□□ -1.48
PRR1	YKL116C	HSP82	P02829	709 aa	Known RBP	5.78	□□□□□ -1.48
PRR1	YKL116C	KRE2	P27809	442 aa		5.78	□□□□□ -1.48
PRR1	YKL116C	SRP40	P32583	406 aa	Predicted RBP	5.78	□□□□□ -1.48
PRR1	YKL116C	MPE1	P35728	441 aa	Known RBP	5.78	□□□□□ -1.48
PRR1	YKL116C	BOI1	P38041	980 aa	Known RBP	5.78	□□□□□ -1.48
PRR1	YKL116C	RPS15	Q01855	142 aa	Known RBP	5.78	□□□□□ -1.48
PRR1	YKL116C	CDC6	P09119	513 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	MPH3	P0CE00	602 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	SNF3	P10870	884 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	PGI1	P12709	554 aa	Known RBP	5.77	□□□□□ -1.49
PRR1	YKL116C	RGP1	P16664	663 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	CBP3	P21560	335 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	VPS1	P21576	704 aa	Known RBP	5.77	□□□□□ -1.49
PRR1	YKL116C	SWI4	P25302	1093 aa	Known RBP	5.77	□□□□□ -1.49
PRR1	YKL116C	SMY1	P32364	656 aa	Known RBP	5.77	□□□□□ -1.49
PRR1	YKL116C	SIS2	P36024	562 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	GEF1	P37020	779 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	RFT1	P38206	574 aa	Predicted RBP	5.77	□□□□□ -1.49
PRR1	YKL116C	CSM2	P40465	213 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	NSG2	P53898	299 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	IRC3	Q06683	689 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	ETT1	Q08421	412 aa	Known RBP	5.77	□□□□□ -1.49
PRR1	YKL116C	DCS2	Q12123	353 aa		5.77	□□□□□ -1.49
PRR1	YKL116C	MST1	P07236	462 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	URA1	P28272	314 aa	Predicted RBP	5.76	□□□□□ -1.49
PRR1	YKL116C	PRO3	P32263	286 aa	Known RBP	5.76	□□□□□ -1.49
PRR1	YKL116C	ANP1	P32629	500 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	MDL2	P33311	773 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	NPL4	P33755	580 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	MYO3	P36006	1272 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	YFH7	P43591	353 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	TIM50	Q02776	476 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
PRR1	YKL116C	FLO11	P08640	1367 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	HXK1	P04806	485 aa	Known RBP	5.76	□□□□□ -1.49
PRR1	YKL116C	SSA2	P10592	639 aa	Known RBP	5.76	□□□□□ -1.49
PRR1	YKL116C	TAF13	P11747	167 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	GSY2	P27472	705 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	YBL086C	P38177	466 aa		5.76	□□□□□ -1.49
PRR1	YKL116C	GET3	Q12154	354 aa	Known RBP	5.76	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms