RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W NRD1P53617 575 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
RTT107YHR154W MAG2Q06436 670 aaKnown RBP2.7□□□□□ -1.98
RTT107YHR154W FYV10P40492 516 aa2.69□□□□□ -1.98
RTT107YHR154W EMP47P43555 445 aa2.69□□□□□ -1.98
RTT107YHR154W SRB8P25648 1427 aa2.69□□□□□ -1.98
RTT107YHR154W MET6P05694 767 aaKnown RBP2.69□□□□□ -1.98
RTT107YHR154W SPT2P06843 333 aaPredicted RBP2.69□□□□□ -1.98
RTT107YHR154W CIT2P08679 460 aa2.69□□□□□ -1.98
RTT107YHR154W SSB1P11484 613 aaKnown RBP2.69□□□□□ -1.98
RTT107YHR154W SSB2P40150 613 aaKnown RBP2.69□□□□□ -1.98
RTT107YHR154W QDR1P40475 563 aa2.69□□□□□ -1.98
RTT107YHR154W FOX2Q02207 900 aaKnown RBP2.69□□□□□ -1.98
RTT107YHR154W ECM16Q04217 1267 aaKnown RBP2.69□□□□□ -1.98
RTT107YHR154W SPR28Q04921 423 aa2.69□□□□□ -1.98
RTT107YHR154W YOL057WQ08225 711 aa2.69□□□□□ -1.98
RTT107YHR154W CLN2P20438 545 aa2.68□□□□□ -1.98
RTT107YHR154W PPX1P38698 397 aa2.68□□□□□ -1.98
RTT107YHR154W MNN1P39106 762 aa2.68□□□□□ -1.98
RTT107YHR154W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
RTT107YHR154W SYH1Q02875 849 aaKnown RBP2.68□□□□□ -1.98
RTT107YHR154W NUT2Q06213 157 aa2.68□□□□□ -1.98
RTT107YHR154W RRP15Q06511 250 aaPredicted RBP2.68□□□□□ -1.98
RTT107YHR154W MIP1P15801 1254 aa2.68□□□□□ -1.98
RTT107YHR154W GLY1P37303 387 aaKnown RBP2.68□□□□□ -1.98
RTT107YHR154W YNR029CP53729 429 aaKnown RBP2.68□□□□□ -1.98
RTT107YHR154W MNL2Q12205 849 aa2.68□□□□□ -1.98
RTT107YHR154W TRM1P15565 570 aaKnown RBP2.68□□□□□ -1.98
RTT107YHR154W RPT1P33299 467 aaKnown RBP2.68□□□□□ -1.98
RTT107YHR154W KXD1P53158 218 aa2.68□□□□□ -1.98
RTT107YHR154W PDI1P17967 522 aaKnown RBP2.67□□□□□ -1.98
RTT107YHR154W VAN1P23642 535 aa2.67□□□□□ -1.98
RTT107YHR154W PEP12P32854 288 aa2.67□□□□□ -1.98
RTT107YHR154W BOL3P39724 118 aa2.67□□□□□ -1.98
RTT107YHR154W ATG1P53104 897 aa2.67□□□□□ -1.98
RTT107YHR154W CWC15Q03772 175 aaKnown RBP2.67□□□□□ -1.98
RTT107YHR154W STB3Q12427 513 aa2.67□□□□□ -1.98
RTT107YHR154W URB1P34241 1764 aaKnown RBP2.67□□□□□ -1.98
RTT107YHR154W TRL1P09880 827 aaKnown RBP2.67□□□□□ -1.98
RTT107YHR154W NAB3P38996 802 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
RTT107YHR154W IOC3P43596 787 aa2.67□□□□□ -1.98
RTT107YHR154W SOH1P38633 127 aa2.66□□□□□ -1.98
RTT107YHR154W AIM21P40563 679 aa2.66□□□□□ -1.98
RTT107YHR154W GIN4Q12263 1142 aa2.66□□□□□ -1.98
RTT107YHR154W NUP192P47054 1683 aa2.66□□□□□ -1.98
RTT107YHR154W HAP4P14064 554 aa2.66□□□□□ -1.98
RTT107YHR154W STI1P15705 589 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
RTT107YHR154W PBP2P38151 413 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
RTT107YHR154W YEN1P40028 759 aa2.66□□□□□ -1.98
RTT107YHR154W ATG3P40344 310 aa2.66□□□□□ -1.98
RTT107YHR154W TPM2P40414 161 aa2.66□□□□□ -1.98
RTT107YHR154W MDG1P53885 366 aa2.66□□□□□ -1.98
RTT107YHR154W PUF6Q04373 656 aaKnown RBP2.66□□□□□ -1.98
RTT107YHR154W FRT1Q99332 602 aa2.66□□□□□ -1.98
RTT107YHR154W RDS2P19541 446 aaKnown RBP2.66□□□□□ -1.98
RTT107YHR154W PRI2P20457 528 aa2.66□□□□□ -1.98
RTT107YHR154W KIP2P28743 706 aa2.66□□□□□ -1.98
RTT107YHR154W RPS26AP39938 119 aaKnown RBP2.66□□□□□ -1.98
RTT107YHR154W RPS26BP39939 119 aaKnown RBP2.66□□□□□ -1.98
RTT107YHR154W MSH4P40965 878 aaPredicted RBP2.66□□□□□ -1.98
RTT107YHR154W NUP85P46673 744 aa2.66□□□□□ -1.98
RTT107YHR154W ZDS1P50111 915 aaKnown RBP2.66□□□□□ -1.98
RTT107YHR154W ACS2P52910 683 aaKnown RBP2.66□□□□□ -1.98
RTT107YHR154W NSE3Q05541 303 aa2.66□□□□□ -1.98
RTT107YHR154W KAR1P11927 433 aa2.65□□□□□ -1.98
RTT107YHR154W SRS2P12954 1174 aa2.65□□□□□ -1.98
RTT107YHR154W PHO87P25360 923 aa2.65□□□□□ -1.98
RTT107YHR154W TIM54P47045 478 aa2.65□□□□□ -1.98
RTT107YHR154W RIA1P53893 1110 aa2.65□□□□□ -1.98
RTT107YHR154W AGE1Q04412 482 aa2.65□□□□□ -1.98
RTT107YHR154W PHM7Q12252 991 aa2.65□□□□□ -1.99
RTT107YHR154W TY1A-BLQ12266 440 aa2.65□□□□□ -1.99
RTT107YHR154W PET112P33893 541 aa2.64□□□□□ -1.99
RTT107YHR154W PMC1P38929 1173 aaPredicted RBP2.64□□□□□ -1.99
RTT107YHR154W TPO2P53283 614 aa2.64□□□□□ -1.99
RTT107YHR154W PUS6P53294 404 aa2.64□□□□□ -1.99
RTT107YHR154W VPS16Q03308 798 aa2.64□□□□□ -1.99
RTT107YHR154W STE20Q03497 939 aaKnown RBP2.64□□□□□ -1.99
RTT107YHR154W TRS33Q99394 268 aa2.64□□□□□ -1.99
RTT107YHR154W KRE5P22023 1365 aa2.64□□□□□ -1.99
RTT107YHR154W SRM1P21827 482 aa2.64□□□□□ -1.99
RTT107YHR154W MET4P32389 672 aa2.64□□□□□ -1.99
RTT107YHR154W YHL008CP38750 627 aa2.64□□□□□ -1.99
RTT107YHR154W RPN11P43588 306 aaKnown RBP2.64□□□□□ -1.99
RTT107YHR154W YJR107WP47145 328 aa2.64□□□□□ -1.99
RTT107YHR154W YJR142WP47173 342 aa2.64□□□□□ -1.99
RTT107YHR154W CWH41P53008 833 aa2.64□□□□□ -1.99
RTT107YHR154W HUL5P53119 910 aa2.64□□□□□ -1.99
RTT107YHR154W NAF1P53919 492 aaKnown RBP2.64□□□□□ -1.99
RTT107YHR154W YNL115CP53925 644 aa2.64□□□□□ -1.99
RTT107YHR154W ROM2P51862 1356 aaKnown RBP2.64□□□□□ -1.99
RTT107YHR154W THI4P32318 326 aa2.64□□□□□ -1.99
RTT107YHR154W NUP82P40368 713 aa2.64□□□□□ -1.99
RTT107YHR154W ROM1P53046 1155 aa2.64□□□□□ -1.99
RTT107YHR154W FKS3Q04952 1785 aa2.64□□□□□ -1.99
RTT107YHR154W YEF3P16521 1044 aaKnown RBP2.63□□□□□ -1.99
RTT107YHR154W TEC1P18412 486 aa2.63□□□□□ -1.99
RTT107YHR154W SIT4P20604 311 aa2.63□□□□□ -1.99
RTT107YHR154W RPA135P22138 1203 aaKnown RBP2.63□□□□□ -1.99
RTT107YHR154W GUT2P32191 649 aa2.63□□□□□ -1.99
RTT107YHR154W ERP2P39704 215 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms