RNA–Protein interactions for RNA: YGR161C-D

YGR161C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YGR161C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR161C-D	YGR161C-D	YPL260W	Q08977	551 aa		2.96	□□□□□ -1.94
YGR161C-D	YGR161C-D	TGL5	Q12043	749 aa		2.96	□□□□□ -1.94
YGR161C-D	YGR161C-D	NCR1	Q12200	1170 aa		2.96	□□□□□ -1.94
YGR161C-D	YGR161C-D	JIP3	O13555	125 aa		2.96	□□□□□ -1.94
YGR161C-D	YGR161C-D	YBR287W	P38355	427 aa		2.96	□□□□□ -1.94
YGR161C-D	YGR161C-D	TFB4	Q12004	338 aa		2.96	□□□□□ -1.94
YGR161C-D	YGR161C-D	HSP82	P02829	709 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	SRP40	P32583	406 aa	Predicted RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	RPS0B	P46654	252 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	MSB3	P48566	633 aa	Predicted RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	ATG38	Q05789	226 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	CDC45	Q08032	650 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	SSF2	Q12153	453 aa	Predicted RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	ADE6	P38972	1358 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	SSK22	P25390	1331 aa	Predicted RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	PMA1	P05030	918 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	VMA2	P16140	517 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	RET1	P22276	1149 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	CMK1	P27466	446 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	SSP1	P38871	571 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	SHC1	P39000	512 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	GID8	P40208	455 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	APC5	Q08683	685 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	RSR1	P13856	272 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	VMA4	P22203	233 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	APN2	P38207	520 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	EFM6	P53970	246 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	HCR1	Q05775	265 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	YCS4	Q06156	1176 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	TUM1	Q08686	304 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	MSC6	Q08818	692 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	RIM20	Q12033	661 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	RPS24A	P0CX31	135 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	RPS24B	P0CX32	135 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	SPT15	P13393	240 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	RPL8A	P17076	256 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	APL6	P46682	809 aa		2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	ZPR1	P53303	486 aa	Known RBP	2.95	□□□□□ -1.94
YGR161C-D	YGR161C-D	HAP1	P0CE41	1502 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	CDC34	P14682	295 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	FRS2	P15625	503 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	TTI1	P36097	1038 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	CST26	P38226	397 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	SMC2	P38989	1170 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	HMF1	P40037	129 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	MSH4	P40965	878 aa	Predicted RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	RSM7	P47150	247 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	YDR338C	Q05497	695 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	CST9	Q06032	482 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	CBP1	P07252	654 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	MTF2	P10849	440 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	SYN8	P31377	255 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	SPC110	P32380	944 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	GIP1	P38229	639 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	ERC1	P38767	581 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	YAP5	P40574	245 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	YJR079W	P47126	109 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	MLC1	P53141	149 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	BTN2	P53286	410 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	SOL4	P53315	255 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	YML083C	Q04526	418 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	JIP5	Q06214	492 aa	Predicted RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	SPO21	Q12411	609 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	CLB1	P24868	471 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	MCM2	P29469	868 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	TFC1	P32367	649 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	TBS1	P38114	1094 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	RSC8	P43609	557 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	NCS6	P53088	359 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	ESC8	Q08119	714 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	NOP12	Q08208	459 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	TY4B-P	A0A0B7P3V8	1104 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	COB	P00163	385 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	ILS1	P09436	1072 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	KRS1	P15180	591 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	MIH1	P23748	554 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	CDC60	P26637	1090 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	PMI40	P29952	429 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	RPC37	P36121	282 aa		2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	TYS1	P36421	394 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	FYV8	P46949	817 aa	Known RBP	2.94	□□□□□ -1.94
YGR161C-D	YGR161C-D	HXT13	P39924	564 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	YGL082W	P53155	381 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	PIB2	P53191	635 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	ADY4	Q05955	493 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	APL5	Q08951	932 aa	Known RBP	2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	DEP1	P31385	405 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	MFT1	P33441	392 aa	Known RBP	2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	NUP133	P36161	1157 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	HEF3	P53978	1044 aa	Known RBP	2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	RIP-Chip
YGR161C-D	YGR161C-D	INA17	Q02888	182 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	RUD3	Q12234	484 aa	Known RBP	2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
YGR161C-D	YGR161C-D	NIT1	P40447	199 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	MAD1	P40957	749 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	SPO74	P45819	413 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	SEY1	Q99287	776 aa		2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	PRT1	P06103	763 aa	Known RBP	2.93	□□□□□ -1.94
YGR161C-D	YGR161C-D	PCK1	P10963	549 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms