RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W TPM1P17536 199 aaKnown RBP6.39□□□□□ -1.39
SHE10YGL228W MSM1P22438 575 aa6.39□□□□□ -1.39
SHE10YGL228W SLI15P38283 698 aa6.39□□□□□ -1.39
SHE10YGL228W UTP7P40055 554 aaKnown RBP6.39□□□□□ -1.39
SHE10YGL228W SPO22P40511 975 aa6.39□□□□□ -1.39
SHE10YGL228W FPK1P53739 893 aa6.39□□□□□ -1.39
SHE10YGL228W RPS15Q01855 142 aaKnown RBP6.39□□□□□ -1.39
SHE10YGL228W ACK1Q07622 623 aaPredicted RBP6.39□□□□□ -1.39
SHE10YGL228W SLN1P39928 1220 aaPredicted RBP6.38□□□□□ -1.39
SHE10YGL228W YJL171CP46992 396 aa6.38□□□□□ -1.39
SHE10YGL228W PTK2P47116 818 aaKnown RBP6.38□□□□□ -1.39
SHE10YGL228W MTC3P53077 123 aa6.38□□□□□ -1.39
SHE10YGL228W UFD2P54860 961 aa6.38□□□□□ -1.39
SHE10YGL228W ECM23Q02710 187 aa6.38□□□□□ -1.39
SHE10YGL228W ESF1Q06344 628 aaKnown RBP6.38□□□□□ -1.39
SHE10YGL228W SPN1Q06505 410 aaPredicted RBP6.38□□□□□ -1.39
SHE10YGL228W RPS9BP05755 195 aaKnown RBP6.37□□□□□ -1.39
SHE10YGL228W RER2P35196 286 aa6.37□□□□□ -1.39
SHE10YGL228W CRG1P38892 291 aaRIP-Chip data6.37□□□□□ -1.39not detected
SHE10YGL228W RTS1P38903 757 aa6.37□□□□□ -1.39
SHE10YGL228W DJP1P40564 432 aa6.37□□□□□ -1.39
SHE10YGL228W FET4P40988 552 aa6.37□□□□□ -1.39
SHE10YGL228W SEN54Q02825 467 aaPredicted RBP6.37□□□□□ -1.39
SHE10YGL228W PRO3P32263 286 aaKnown RBP6.36□□□□□ -1.39
SHE10YGL228W FBP26P32604 452 aa6.36□□□□□ -1.39
SHE10YGL228W ENT3P47160 408 aa6.36□□□□□ -1.39
SHE10YGL228W CTF18P49956 741 aa6.36□□□□□ -1.39
SHE10YGL228W CRF1Q04930 467 aa6.36□□□□□ -1.39
SHE10YGL228W MRD1Q06106 887 aaKnown RBP6.36□□□□□ -1.39
SHE10YGL228W YPL260WQ08977 551 aa6.36□□□□□ -1.39
SHE10YGL228W YLR278CQ05854 1341 aa6.36□□□□□ -1.39
SHE10YGL228W HPR1P17629 752 aaKnown RBP6.36□□□□□ -1.39
SHE10YGL228W MYO3P36006 1272 aa6.36□□□□□ -1.39
SHE10YGL228W VID27P40157 782 aa6.36□□□□□ -1.39
SHE10YGL228W ARP5P53946 755 aa6.36□□□□□ -1.39
SHE10YGL228W KEL3Q08979 651 aaPredicted RBP6.36□□□□□ -1.39
SHE10YGL228W THS1P04801 734 aaKnown RBP6.35□□□□□ -1.39
SHE10YGL228W ANP1P32629 500 aa6.35□□□□□ -1.39
SHE10YGL228W GLC3P32775 704 aa6.35□□□□□ -1.39
SHE10YGL228W EPL1P43572 832 aa6.35□□□□□ -1.39
SHE10YGL228W YGL081WP53156 320 aa6.35□□□□□ -1.39
SHE10YGL228W TIM50Q02776 476 aa6.35□□□□□ -1.39
SHE10YGL228W EST2Q06163 884 aa6.35□□□□□ -1.39
SHE10YGL228W TFC6Q06339 672 aa6.35□□□□□ -1.39
SHE10YGL228W RAD61Q99359 647 aa6.35□□□□□ -1.39
SHE10YGL228W RPL19AP0CX82 189 aaKnown RBP6.34□□□□□ -1.39
SHE10YGL228W RPL19BP0CX83 189 aaPredicted RBP6.34□□□□□ -1.39
SHE10YGL228W MATALPHA2P0CY08 210 aa6.34□□□□□ -1.39
SHE10YGL228W HMLALPHA2P0CY09 210 aa6.34□□□□□ -1.39
SHE10YGL228W RIT1P23796 513 aa6.34□□□□□ -1.39
SHE10YGL228W CSM2P40465 213 aa6.34□□□□□ -1.39
SHE10YGL228W YGR117CP53270 476 aa6.34□□□□□ -1.39
SHE10YGL228W LSP1Q12230 341 aaKnown RBP6.34□□□□□ -1.39
SHE10YGL228W CBP1P07252 654 aa6.33□□□□□ -1.4
SHE10YGL228W VPS24P36095 224 aaKnown RBP6.33□□□□□ -1.4
SHE10YGL228W AKR1P39010 764 aa6.33□□□□□ -1.4
SHE10YGL228W YKE2P52553 114 aa6.33□□□□□ -1.4
SHE10YGL228W AIM7Q12156 149 aa6.33□□□□□ -1.4
SHE10YGL228W CPA2P03965 1118 aaKnown RBP6.33□□□□□ -1.4
SHE10YGL228W RTG2P32608 588 aaKnown RBP6.33□□□□□ -1.4
SHE10YGL228W EMP47P43555 445 aa6.33□□□□□ -1.4
SHE10YGL228W HRQ1Q05549 1077 aa6.33□□□□□ -1.4
SHE10YGL228W PCL8Q08966 492 aa6.33□□□□□ -1.4
SHE10YGL228W BIK1P11709 440 aa6.32□□□□□ -1.4
SHE10YGL228W ADP1P25371 1049 aa6.32□□□□□ -1.4
SHE10YGL228W YGL015CP33199 130 aa6.32□□□□□ -1.4
SHE10YGL228W KEL1P38853 1164 aaKnown RBP6.32□□□□□ -1.4
SHE10YGL228W MSH4P40965 878 aaPredicted RBP6.32□□□□□ -1.4
SHE10YGL228W YLR407WQ06070 228 aa6.32□□□□□ -1.4
SHE10YGL228W PUS5Q06244 254 aa6.32□□□□□ -1.4
SHE10YGL228W FKS1P38631 1876 aaKnown RBP6.31□□□□□ -1.4
SHE10YGL228W ACE2P21192 770 aa6.31□□□□□ -1.4
SHE10YGL228W MAK31P23059 88 aa6.31□□□□□ -1.4
SHE10YGL228W PRE8P23639 250 aa6.31□□□□□ -1.4
SHE10YGL228W CHS3P29465 1165 aa6.31□□□□□ -1.4
SHE10YGL228W YHL017WP38745 532 aa6.31□□□□□ -1.4
SHE10YGL228W VPS8P39702 1274 aa6.31□□□□□ -1.4
SHE10YGL228W MYO5Q04439 1219 aaKnown RBP6.31□□□□□ -1.4
SHE10YGL228W YDL124WQ07551 312 aaKnown RBP6.31□□□□□ -1.4
SHE10YGL228W YOR111WQ99210 232 aa6.31□□□□□ -1.4
SHE10YGL228W TOM1Q03280 3268 aa6.31□□□□□ -1.4
SHE10YGL228W TUB2P02557 457 aaKnown RBP6.3□□□□□ -1.4
SHE10YGL228W PMA1P05030 918 aaKnown RBP6.3□□□□□ -1.4
SHE10YGL228W PFK2P16862 959 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
SHE10YGL228W HCA4P20448 770 aaKnown RBP6.3□□□□□ -1.4
SHE10YGL228W SRM1P21827 482 aa6.3□□□□□ -1.4
SHE10YGL228W MBR1P23493 339 aa6.3□□□□□ -1.4
SHE10YGL228W PRX1P34227 261 aaKnown RBP6.3□□□□□ -1.4
SHE10YGL228W YBL028CP38202 106 aa6.3□□□□□ -1.4
SHE10YGL228W ELG1Q12050 791 aa6.3□□□□□ -1.4
SHE10YGL228W YPL150WQ12152 901 aa6.3□□□□□ -1.4
SHE10YGL228W KIN1P13185 1064 aa6.3□□□□□ -1.4
SHE10YGL228W RAD53P22216 821 aa6.3□□□□□ -1.4
SHE10YGL228W MSP1P28737 362 aa6.3□□□□□ -1.4
SHE10YGL228W SIS2P36024 562 aa6.3□□□□□ -1.4
SHE10YGL228W RPN10P38886 268 aaKnown RBP6.3□□□□□ -1.4
SHE10YGL228W BDH2P39713 417 aa6.3□□□□□ -1.4
SHE10YGL228W BUD6P41697 788 aa6.3□□□□□ -1.4
SHE10YGL228W EAF7P53911 425 aaKnown RBP6.3□□□□□ -1.4
SHE10YGL228W SKG3Q06315 1026 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms