RNA–Protein interactions for RNA: YFR022W

ROG3, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROG3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROG3YFR022W NIP100P33420 868 aa6.01□□□□□ -1.45
ROG3YFR022W VPS35P34110 944 aa6.01□□□□□ -1.45
ROG3YFR022W SEG2P34250 1132 aa6.01□□□□□ -1.45
ROG3YFR022W RGD1P38339 666 aa6.01□□□□□ -1.45
ROG3YFR022W CTK3P46963 296 aaPredicted RBP6.01□□□□□ -1.45
ROG3YFR022W OCA1P50946 238 aaPredicted RBP6.01□□□□□ -1.45
ROG3YFR022W PLP1Q04004 230 aa6.01□□□□□ -1.45
ROG3YFR022W NAT1P12945 854 aaKnown RBP6.01□□□□□ -1.45
ROG3YFR022W UGA3P26370 528 aa6.01□□□□□ -1.45
ROG3YFR022W CPS1P27614 576 aa6.01□□□□□ -1.45
ROG3YFR022W ECM4P36156 370 aa6.01□□□□□ -1.45
ROG3YFR022W REX2P54964 269 aaKnown RBP6.01□□□□□ -1.45
ROG3YFR022W DRS2P39524 1355 aa6□□□□□ -1.45
ROG3YFR022W KRS1P15180 591 aaKnown RBP6□□□□□ -1.45
ROG3YFR022W MRF1P30775 413 aaPredicted RBP6□□□□□ -1.45
ROG3YFR022W HSP78P33416 811 aa6□□□□□ -1.45
ROG3YFR022W SRL3P36167 246 aa6□□□□□ -1.45
ROG3YFR022W CIC1P38779 376 aaKnown RBP6□□□□□ -1.45
ROG3YFR022W NUP60P39705 539 aa6□□□□□ -1.45
ROG3YFR022W NOP15P53927 220 aaPredicted RBP6□□□□□ -1.45
ROG3YFR022W VPS20Q04272 221 aa6□□□□□ -1.45
ROG3YFR022W VAM6Q07468 1049 aa6□□□□□ -1.45
ROG3YFR022W SES1P07284 462 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W SEN2P16658 377 aa5.99□□□□□ -1.45
ROG3YFR022W PHO84P25297 587 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W MRP8P35719 219 aa5.99□□□□□ -1.45
ROG3YFR022W UTP18P40362 594 aaPredicted RBP5.99□□□□□ -1.45
ROG3YFR022W SYG1P40528 902 aa5.99□□□□□ -1.45
ROG3YFR022W VID28P40547 921 aa5.99□□□□□ -1.45
ROG3YFR022W IOC3P43596 787 aa5.99□□□□□ -1.45
ROG3YFR022W COP1P53622 1201 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W ELA1P53861 379 aaPredicted RBP5.99□□□□□ -1.45
ROG3YFR022W CUS1Q02554 436 aaPredicted RBP5.99□□□□□ -1.45
ROG3YFR022W POB3Q04636 552 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W FAR8Q05040 523 aa5.99□□□□□ -1.45
ROG3YFR022W MET7Q08645 548 aa5.99□□□□□ -1.45
ROG3YFR022W GAL11P19659 1081 aa5.99□□□□□ -1.45
ROG3YFR022W RPC19P28000 142 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W ETP1P38748 585 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W GCN20P43535 752 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W BFA1P47113 574 aa5.99□□□□□ -1.45
ROG3YFR022W PRP43P53131 767 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W FAR11P53917 953 aa5.99□□□□□ -1.45
ROG3YFR022W BET4Q00618 327 aa5.99□□□□□ -1.45
ROG3YFR022W COG4Q06096 861 aa5.99□□□□□ -1.45
ROG3YFR022W ATG9Q12142 997 aa5.99□□□□□ -1.45
ROG3YFR022W RIO1Q12196 484 aaKnown RBP5.99□□□□□ -1.45
ROG3YFR022W KOG1P38873 1557 aa5.98□□□□□ -1.45
ROG3YFR022W RAV1P47104 1357 aa5.98□□□□□ -1.45
ROG3YFR022W GCD2P12754 651 aaPredicted RBP5.98□□□□□ -1.45
ROG3YFR022W TUP1P16649 713 aa5.98□□□□□ -1.45
ROG3YFR022W PAP1P29468 568 aaKnown RBP5.98□□□□□ -1.45
ROG3YFR022W ACP1P32463 125 aa5.98□□□□□ -1.45
ROG3YFR022W DLD1P32891 587 aa5.98□□□□□ -1.45
ROG3YFR022W YJR008WP47085 338 aa5.98□□□□□ -1.45
ROG3YFR022W SGM1P47166 707 aa5.98□□□□□ -1.45
ROG3YFR022W CWH41P53008 833 aa5.98□□□□□ -1.45
ROG3YFR022W TSR2Q06672 205 aaKnown RBP5.98□□□□□ -1.45
ROG3YFR022W YDL073WQ07454 984 aa5.98□□□□□ -1.45
ROG3YFR022W APC11Q12157 165 aa5.98□□□□□ -1.45
ROG3YFR022W GEA2P39993 1459 aaKnown RBP5.98□□□□□ -1.45
ROG3YFR022W MAK16P10962 306 aaPredicted RBP5.98□□□□□ -1.45
ROG3YFR022W CMP2P14747 604 aa5.98□□□□□ -1.45
ROG3YFR022W TAL1P15019 335 aaKnown RBP5.98□□□□□ -1.45
ROG3YFR022W PUF4P25339 888 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
ROG3YFR022W LIN1P38852 340 aaPredicted RBP5.98□□□□□ -1.45
ROG3YFR022W SAK1P38990 1142 aa5.98□□□□□ -1.45
ROG3YFR022W MAM1P40065 302 aa5.98□□□□□ -1.45
ROG3YFR022W POL32P47110 350 aa5.98□□□□□ -1.45
ROG3YFR022W MFM1Q02783 413 aa5.98□□□□□ -1.45
ROG3YFR022W RAT1Q02792 1006 aaKnown RBP5.98□□□□□ -1.45
ROG3YFR022W YKU80Q04437 629 aa5.98□□□□□ -1.45
ROG3YFR022W MGR3Q04472 501 aa5.98□□□□□ -1.45
ROG3YFR022W HIR3P47171 1648 aa5.98□□□□□ -1.45
ROG3YFR022W SSK22P25390 1331 aaPredicted RBP5.97□□□□□ -1.45
ROG3YFR022W SSC1P0CS90 654 aaKnown RBP5.97□□□□□ -1.45
ROG3YFR022W PRP16P15938 1071 aaPredicted RBP5.97□□□□□ -1.45
ROG3YFR022W MRPL40P36534 297 aa5.97□□□□□ -1.45
ROG3YFR022W SSF1P38789 453 aaPredicted RBP5.97□□□□□ -1.45
ROG3YFR022W ATG3P40344 310 aa5.97□□□□□ -1.45
ROG3YFR022W PMT7Q06644 662 aa5.97□□□□□ -1.45
ROG3YFR022W CLP1Q08685 445 aaPredicted RBP5.97□□□□□ -1.45
ROG3YFR022W YIG1Q08956 461 aa5.97□□□□□ -1.45
ROG3YFR022W ARO1P08566 1588 aaKnown RBP5.97□□□□□ -1.45
ROG3YFR022W ADH4P10127 382 aa5.97□□□□□ -1.45
ROG3YFR022W PET122P10355 254 aa5.97□□□□□ -1.45
ROG3YFR022W NPL6P32832 435 aa5.97□□□□□ -1.45
ROG3YFR022W RPC34P32910 317 aa5.97□□□□□ -1.45
ROG3YFR022W BLI1P35727 113 aa5.97□□□□□ -1.45
ROG3YFR022W DID4P36108 232 aa5.97□□□□□ -1.45
ROG3YFR022W HYR1P40581 163 aaKnown RBP5.97□□□□□ -1.45
ROG3YFR022W LAM5P43560 674 aa5.97□□□□□ -1.45
ROG3YFR022W NPA3P47122 385 aa5.97□□□□□ -1.45
ROG3YFR022W SHE10P53075 577 aa5.97□□□□□ -1.45
ROG3YFR022W TAF8Q03750 510 aa5.97□□□□□ -1.45
ROG3YFR022W LSO2Q3E772 92 aaKnown RBP5.97□□□□□ -1.45
ROG3YFR022W DPS1P04802 557 aaKnown RBP5.96□□□□□ -1.46
ROG3YFR022W BIK1P11709 440 aa5.96□□□□□ -1.46
ROG3YFR022W TYR1P20049 452 aa5.96□□□□□ -1.46
ROG3YFR022W RAD5P32849 1169 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms