RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W NSE3Q05541 303 aa6.57□□□□□ -1.36
DEG1YFL001W MLF3P32047 452 aa6.56□□□□□ -1.36
DEG1YFL001W YKL091CP33324 310 aaKnown RBP6.56□□□□□ -1.36
DEG1YFL001W FIR1P40020 876 aa6.56□□□□□ -1.36
DEG1YFL001W PSY2P40164 858 aa6.56□□□□□ -1.36
DEG1YFL001W INP54Q08227 384 aaKnown RBP6.56□□□□□ -1.36
DEG1YFL001W TIF6Q12522 245 aaKnown RBP6.56□□□□□ -1.36
DEG1YFL001W ALA1P40825 983 aaKnown RBP6.55□□□□□ -1.36
DEG1YFL001W MRPS18P42847 217 aa6.55□□□□□ -1.36
DEG1YFL001W OSW7P43611 510 aa6.55□□□□□ -1.36
DEG1YFL001W CWC24P53769 259 aa6.55□□□□□ -1.36
DEG1YFL001W DAL4Q04895 635 aa6.55□□□□□ -1.36
DEG1YFL001W YCS4Q06156 1176 aa6.55□□□□□ -1.36
DEG1YFL001W MCD1Q12158 566 aa6.55□□□□□ -1.36
DEG1YFL001W CIT2P08679 460 aa6.54□□□□□ -1.36
DEG1YFL001W STI1P15705 589 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
DEG1YFL001W SSN3P39073 555 aa6.54□□□□□ -1.36
DEG1YFL001W RPN4Q03465 531 aa6.54□□□□□ -1.36
DEG1YFL001W FLP1P03870 423 aa6.53□□□□□ -1.36
DEG1YFL001W PRE9P23638 258 aaKnown RBP6.53□□□□□ -1.36
DEG1YFL001W KAP122P32767 1081 aa6.53□□□□□ -1.36
DEG1YFL001W PRP40P33203 583 aaKnown RBP6.53□□□□□ -1.36
DEG1YFL001W YBR287WP38355 427 aa6.53□□□□□ -1.36
DEG1YFL001W YHL008CP38750 627 aa6.53□□□□□ -1.36
DEG1YFL001W YFL066CP43538 392 aa6.53□□□□□ -1.36
DEG1YFL001W CCT8P47079 568 aaKnown RBP6.53□□□□□ -1.36
DEG1YFL001W MSN5P52918 1224 aa6.53□□□□□ -1.36
DEG1YFL001W NAM8Q00539 523 aaKnown RBP6.53□□□□□ -1.36
DEG1YFL001W THI72Q08579 599 aa6.53□□□□□ -1.36
DEG1YFL001W CDC19P00549 500 aaKnown RBP6.52□□□□□ -1.37
DEG1YFL001W AI1P03875 834 aa6.52□□□□□ -1.37
DEG1YFL001W RPS31P05759 152 aaKnown RBP6.52□□□□□ -1.37
DEG1YFL001W PPG1P32838 368 aa6.52□□□□□ -1.37
DEG1YFL001W ISW1P38144 1129 aa6.52□□□□□ -1.37
DEG1YFL001W JJJ2P46997 583 aa6.52□□□□□ -1.37
DEG1YFL001W KAR2P16474 682 aaKnown RBP6.51□□□□□ -1.37
DEG1YFL001W RPC31P17890 251 aa6.51□□□□□ -1.37
DEG1YFL001W RRP14P36080 434 aaKnown RBP6.51□□□□□ -1.37
DEG1YFL001W SHM1P37292 490 aaPredicted RBP6.51□□□□□ -1.37
DEG1YFL001W GIP1P38229 639 aa6.51□□□□□ -1.37
DEG1YFL001W YTA6P40328 754 aa6.51□□□□□ -1.37
DEG1YFL001W BUD6P41697 788 aa6.51□□□□□ -1.37
DEG1YFL001W MTO1P53070 669 aa6.51□□□□□ -1.37
DEG1YFL001W YPL109CQ02981 657 aa6.51□□□□□ -1.37
DEG1YFL001W YOR296WQ08748 1289 aa6.51□□□□□ -1.37
DEG1YFL001W CDC34P14682 295 aa6.5□□□□□ -1.37
DEG1YFL001W BSD2P38356 321 aa6.5□□□□□ -1.37
DEG1YFL001W TAT2P38967 592 aa6.5□□□□□ -1.37
DEG1YFL001W ALG12P53730 551 aa6.5□□□□□ -1.37
DEG1YFL001W BDF2Q07442 638 aa6.5□□□□□ -1.37
DEG1YFL001W CDC53Q12018 815 aaKnown RBP6.5□□□□□ -1.37
DEG1YFL001W MCM5P29496 775 aaKnown RBP6.5□□□□□ -1.37
DEG1YFL001W FPR3P38911 411 aaKnown RBP6.5□□□□□ -1.37
DEG1YFL001W FAA4P47912 694 aaKnown RBP6.5□□□□□ -1.37
DEG1YFL001W CTR9P89105 1077 aa6.5□□□□□ -1.37
DEG1YFL001W GDE1Q02979 1223 aa6.5□□□□□ -1.37
DEG1YFL001W GRX1P25373 110 aaKnown RBP6.49□□□□□ -1.37
DEG1YFL001W DUT1P33317 147 aa6.49□□□□□ -1.37
DEG1YFL001W PBP2P38151 413 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
DEG1YFL001W VTC4P47075 721 aa6.49□□□□□ -1.37
DEG1YFL001W YGR053CP53234 283 aa6.49□□□□□ -1.37
DEG1YFL001W YOR131CQ12486 218 aa6.49□□□□□ -1.37
DEG1YFL001W IRE1P32361 1115 aa6.48□□□□□ -1.37
DEG1YFL001W NAB2P32505 525 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
DEG1YFL001W ULP1Q02724 621 aa6.48□□□□□ -1.37
DEG1YFL001W ADI1Q03677 179 aa6.48□□□□□ -1.37
DEG1YFL001W MSH6Q03834 1242 aa6.48□□□□□ -1.37
DEG1YFL001W COBP00163 385 aa6.47□□□□□ -1.37
DEG1YFL001W SLA1P32790 1244 aa6.47□□□□□ -1.37
DEG1YFL001W UGA4P32837 571 aa6.47□□□□□ -1.37
DEG1YFL001W AHP1P38013 176 aaKnown RBP6.47□□□□□ -1.37
DEG1YFL001W AIM46P38885 310 aa6.47□□□□□ -1.37
DEG1YFL001W PIC2P40035 300 aa6.47□□□□□ -1.37
DEG1YFL001W NUT1P53114 1132 aa6.47□□□□□ -1.37
DEG1YFL001W EMG1Q06287 252 aaKnown RBP6.47□□□□□ -1.37
DEG1YFL001W LEU1P07264 779 aaKnown RBP6.46□□□□□ -1.38
DEG1YFL001W CUZ1P53899 274 aa6.46□□□□□ -1.38
DEG1YFL001W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
DEG1YFL001W OPI10Q08202 246 aa6.46□□□□□ -1.38
DEG1YFL001W RTT10Q08924 1013 aa6.46□□□□□ -1.38
DEG1YFL001W TY1A-DR3Q12441 440 aa6.46□□□□□ -1.38
DEG1YFL001W PDC6P26263 563 aaKnown RBP6.45□□□□□ -1.38
DEG1YFL001W DAL1P32375 460 aa6.45□□□□□ -1.38
DEG1YFL001W SPF1P39986 1215 aaKnown RBP6.45□□□□□ -1.38
DEG1YFL001W SKP1P52286 194 aa6.45□□□□□ -1.38
DEG1YFL001W HUL5P53119 910 aa6.45□□□□□ -1.38
DEG1YFL001W MON1P53129 644 aa6.45□□□□□ -1.38
DEG1YFL001W PSH1Q12161 406 aa6.45□□□□□ -1.38
DEG1YFL001W YPR053CQ6Q5F3 151 aa6.45□□□□□ -1.38
DEG1YFL001W DUR3P33413 735 aa6.44□□□□□ -1.38
DEG1YFL001W ECM2P38241 364 aaKnown RBP6.44□□□□□ -1.38
DEG1YFL001W CEM1P39525 442 aa6.44□□□□□ -1.38
DEG1YFL001W RVS167P39743 482 aaKnown RBP6.44□□□□□ -1.38
DEG1YFL001W YIL165CP40446 119 aa6.44□□□□□ -1.38
DEG1YFL001W SAP155P43612 1002 aa6.44□□□□□ -1.38
DEG1YFL001W NAN1Q02931 896 aaKnown RBP6.44□□□□□ -1.38
DEG1YFL001W TDA5Q06417 326 aaKnown RBP6.44□□□□□ -1.38
DEG1YFL001W GCR1P07261 785 aa6.43□□□□□ -1.38
DEG1YFL001W RAD4P14736 754 aa6.43□□□□□ -1.38
DEG1YFL001W PRI2P20457 528 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms