RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP5	YER144C	HAL5	P38970	855 aa	Known RBP	4.25	□□□□□ -1.73
UBP5	YER144C	FIG4	P42837	879 aa		4.25	□□□□□ -1.73
UBP5	YER144C	VPS16	Q03308	798 aa		4.25	□□□□□ -1.73
UBP5	YER144C	YLR346C	Q06139	101 aa		4.25	□□□□□ -1.73
UBP5	YER144C	ALR1	Q08269	859 aa		4.25	□□□□□ -1.73
UBP5	YER144C	PHO4	P07270	312 aa	Known RBP	4.24	□□□□□ -1.73
UBP5	YER144C	PTK2	P47116	818 aa	Known RBP	4.24	□□□□□ -1.73
UBP5	YER144C	LSO1	Q3E827	93 aa		4.24	□□□□□ -1.73
UBP5	YER144C	RAD9	P14737	1309 aa		4.24	□□□□□ -1.73
UBP5	YER144C	PUS6	P53294	404 aa		4.24	□□□□□ -1.73
UBP5	YER144C	USO1	P25386	1790 aa		4.23	□□□□□ -1.73
UBP5	YER144C	CAB3	P36076	571 aa		4.23	□□□□□ -1.73
UBP5	YER144C	VAC8	P39968	578 aa		4.23	□□□□□ -1.73
UBP5	YER144C	MTO1	P53070	669 aa		4.23	□□□□□ -1.73
UBP5	YER144C	JIP5	Q06214	492 aa	Predicted RBP	4.23	□□□□□ -1.73
UBP5	YER144C	UBX5	Q06682	500 aa		4.23	□□□□□ -1.73
UBP5	YER144C	PIN2	Q12057	282 aa		4.23	□□□□□ -1.73
UBP5	YER144C	YDL206W	Q12424	762 aa		4.23	□□□□□ -1.73
UBP5	YER144C	SRS2	P12954	1174 aa		4.23	□□□□□ -1.73
UBP5	YER144C	IXR1	P33417	597 aa		4.23	□□□□□ -1.73
UBP5	YER144C	TAF5	P38129	798 aa		4.23	□□□□□ -1.73
UBP5	YER144C	RPN4	Q03465	531 aa		4.23	□□□□□ -1.73
UBP5	YER144C	OPT2	Q06593	877 aa		4.23	□□□□□ -1.73
UBP5	YER144C	PPM2	Q08282	695 aa		4.23	□□□□□ -1.73
UBP5	YER144C	KRE5	P22023	1365 aa		4.23	□□□□□ -1.73
UBP5	YER144C	MCM2	P29469	868 aa		4.22	□□□□□ -1.73
UBP5	YER144C	POL5	P39985	1022 aa	Known RBP	4.22	□□□□□ -1.73
UBP5	YER144C	YJR008W	P47085	338 aa		4.22	□□□□□ -1.73
UBP5	YER144C	RPA14	P50106	137 aa		4.22	□□□□□ -1.73
UBP5	YER144C	ALG12	P53730	551 aa		4.22	□□□□□ -1.73
UBP5	YER144C	ALD6	P54115	500 aa	Known RBP	4.22	□□□□□ -1.73
UBP5	YER144C	APC11	Q12157	165 aa		4.22	□□□□□ -1.73
UBP5	YER144C	DAK2	P43550	591 aa		4.22	□□□□□ -1.73
UBP5	YER144C	UTP13	Q05946	817 aa	Known RBP	4.22	□□□□□ -1.73
UBP5	YER144C	NUG1	P40010	520 aa	Known RBP	4.21	□□□□□ -1.74
UBP5	YER144C	RIA1	P53893	1110 aa		4.21	□□□□□ -1.74
UBP5	YER144C	CAB1	Q04430	367 aa		4.21	□□□□□ -1.74
UBP5	YER144C	YLR419W	Q06698	1435 aa	Known RBP	4.21	□□□□□ -1.74
UBP5	YER144C	HAP4	P14064	554 aa		4.21	□□□□□ -1.74
UBP5	YER144C	MIP1	P15801	1254 aa		4.21	□□□□□ -1.74
UBP5	YER144C	GLO3	P38682	493 aa	Known RBP	4.21	□□□□□ -1.74
UBP5	YER144C	ACO2	P39533	789 aa		4.21	□□□□□ -1.74
UBP5	YER144C	YNR029C	P53729	429 aa	Known RBP	4.21	□□□□□ -1.74
UBP5	YER144C	TSC13	Q99190	310 aa		4.21	□□□□□ -1.74
UBP5	YER144C	UBP1	P25037	809 aa		4.2	□□□□□ -1.74
UBP5	YER144C	NSE3	Q05541	303 aa		4.2	□□□□□ -1.74
UBP5	YER144C	YPR097W	Q06839	1073 aa		4.2	□□□□□ -1.74
UBP5	YER144C	GAS4	Q08271	471 aa		4.2	□□□□□ -1.74
UBP5	YER144C	ENP1	P38333	483 aa	Known RBP	4.2	□□□□□ -1.74
UBP5	YER144C	SOH1	P38633	127 aa		4.2	□□□□□ -1.74
UBP5	YER144C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
UBP5	YER144C	TAF8	Q03750	510 aa		4.2	□□□□□ -1.74
UBP5	YER144C	SPE2	P21182	396 aa		4.19	□□□□□ -1.74
UBP5	YER144C	KIP3	P53086	805 aa	Known RBP	4.19	□□□□□ -1.74
UBP5	YER144C	YGR035C	P53222	116 aa		4.19	□□□□□ -1.74
UBP5	YER144C	TRS120	Q04183	1289 aa		4.19	□□□□□ -1.74
UBP5	YER144C	PUN1	Q06991	263 aa		4.19	□□□□□ -1.74
UBP5	YER144C	MHP1	P43638	1398 aa		4.19	□□□□□ -1.74
UBP5	YER144C	GRX4	P32642	244 aa		4.19	□□□□□ -1.74
UBP5	YER144C	THI12	P42883	340 aa		4.19	□□□□□ -1.74
UBP5	YER144C	THI5	P43534	340 aa		4.19	□□□□□ -1.74
UBP5	YER144C	NUP85	P46673	744 aa		4.19	□□□□□ -1.74
UBP5	YER144C	THI11	P47183	340 aa		4.19	□□□□□ -1.74
UBP5	YER144C	SCW11	P53189	542 aa		4.19	□□□□□ -1.74
UBP5	YER144C	TPO2	P53283	614 aa		4.19	□□□□□ -1.74
UBP5	YER144C	BDF2	Q07442	638 aa		4.19	□□□□□ -1.74
UBP5	YER144C	THI13	Q07748	340 aa		4.19	□□□□□ -1.74
UBP5	YER144C	PSK1	P31374	1356 aa		4.18	□□□□□ -1.74
UBP5	YER144C	PDI1	P17967	522 aa	Known RBP	4.18	□□□□□ -1.74
UBP5	YER144C	TEC1	P18412	486 aa		4.18	□□□□□ -1.74
UBP5	YER144C	RPB10	P22139	70 aa		4.18	□□□□□ -1.74
UBP5	YER144C	GLY1	P37303	387 aa	Known RBP	4.18	□□□□□ -1.74
UBP5	YER144C	NOP2	P40991	618 aa	Known RBP	4.18	□□□□□ -1.74
UBP5	YER144C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
UBP5	YER144C	FUR4	P05316	633 aa	Known RBP	4.17	□□□□□ -1.74
UBP5	YER144C	MRT4	P33201	236 aa	Known RBP	4.17	□□□□□ -1.74
UBP5	YER144C	RRP14	P36080	434 aa	Known RBP	4.17	□□□□□ -1.74
UBP5	YER144C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
UBP5	YER144C	RPT1	P33299	467 aa	Known RBP	4.17	□□□□□ -1.74
UBP5	YER144C	YBR197C	P38306	217 aa		4.16	□□□□□ -1.74
UBP5	YER144C	YIR007W	P40566	764 aa		4.16	□□□□□ -1.74
UBP5	YER144C	YFR016C	P43597	1233 aa	Known RBP	4.16	□□□□□ -1.74
UBP5	YER144C	STE20	Q03497	939 aa	Known RBP	4.16	□□□□□ -1.74
UBP5	YER144C	MTC5	Q03897	1148 aa		4.16	□□□□□ -1.74
UBP5	YER144C	CYC8	P14922	966 aa		4.16	□□□□□ -1.74
UBP5	YER144C	TRK2	P28584	889 aa		4.16	□□□□□ -1.74
UBP5	YER144C	DUT1	P33317	147 aa		4.16	□□□□□ -1.74
UBP5	YER144C	MGE1	P38523	228 aa		4.16	□□□□□ -1.74
UBP5	YER144C	YHR020W	P38708	688 aa	Known RBP	4.16	□□□□□ -1.74
UBP5	YER144C	NGR1	P32831	672 aa	Known RBP	4.15	□□□□□ -1.74
UBP5	YER144C	RTS3	P53289	263 aa		4.15	□□□□□ -1.74
UBP5	YER144C	VAC17	P25591	423 aa		4.15	□□□□□ -1.75
UBP5	YER144C	GUT2	P32191	649 aa		4.15	□□□□□ -1.75
UBP5	YER144C	TOM20	P35180	183 aa		4.15	□□□□□ -1.75
UBP5	YER144C	SEC3	P33332	1336 aa	Known RBP	4.14	□□□□□ -1.75
UBP5	YER144C	HXK1	P04806	485 aa	Known RBP	4.14	□□□□□ -1.75
UBP5	YER144C	ARG82	P07250	355 aa		4.14	□□□□□ -1.75
UBP5	YER144C	RPS26A	P39938	119 aa	Known RBP	4.14	□□□□□ -1.75
UBP5	YER144C	RPS26B	P39939	119 aa	Known RBP	4.14	□□□□□ -1.75
UBP5	YER144C	AIM9	P40053	627 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms