RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C FLC1Q08967 793 aa3.15□□□□□ -1.91
SSN2YDR443C NUP145P49687 1317 aa3.15□□□□□ -1.91
SSN2YDR443C SPT2P06843 333 aaPredicted RBP3.15□□□□□ -1.91
SSN2YDR443C NMD3P38861 518 aaKnown RBP3.15□□□□□ -1.91
SSN2YDR443C HAL5P38970 855 aaKnown RBP3.15□□□□□ -1.91
SSN2YDR443C PES4P39684 611 aa3.15□□□□□ -1.91
SSN2YDR443C RSP5P39940 809 aaKnown RBP3.15□□□□□ -1.91
SSN2YDR443C GPP1P41277 250 aaKnown RBP3.15□□□□□ -1.91
SSN2YDR443C UBA2P52488 636 aa3.15□□□□□ -1.91
SSN2YDR443C NAN1Q02931 896 aaKnown RBP3.15□□□□□ -1.91
SSN2YDR443C ATG13Q06628 738 aa3.15□□□□□ -1.91
SSN2YDR443C GRC3Q07845 632 aa3.15□□□□□ -1.91
SSN2YDR443C VPS15P22219 1454 aa3.15□□□□□ -1.91
SSN2YDR443C JNM1P36224 373 aa3.14□□□□□ -1.91
SSN2YDR443C TRM732Q03496 1420 aa3.14□□□□□ -1.91
SSN2YDR443C TOS4Q06266 489 aa3.14□□□□□ -1.91
SSN2YDR443C NTG2Q08214 380 aa3.14□□□□□ -1.91
SSN2YDR443C MYO4P32492 1471 aa3.14□□□□□ -1.91
SSN2YDR443C PHM6Q05637 104 aa3.14□□□□□ -1.91
SSN2YDR443C YOR238WQ08634 303 aa3.14□□□□□ -1.91
SSN2YDR443C NUP159P40477 1460 aa3.14□□□□□ -1.91
SSN2YDR443C VTH1P40438 1549 aa3.14□□□□□ -1.91
SSN2YDR443C VTH2P40890 1549 aa3.14□□□□□ -1.91
SSN2YDR443C DOT6P40059 670 aaKnown RBP3.14□□□□□ -1.91
SSN2YDR443C IRC3Q06683 689 aa3.14□□□□□ -1.91
SSN2YDR443C GRE2Q12068 342 aaKnown RBP3.14□□□□□ -1.91
SSN2YDR443C DOP1Q03921 1698 aa3.14□□□□□ -1.91
SSN2YDR443C MLP2P40457 1679 aa3.14□□□□□ -1.91
SSN2YDR443C TY1B-AO13527 1196 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C HOM3P10869 527 aa3.13□□□□□ -1.91
SSN2YDR443C TRM1P15565 570 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C SOH1P38633 127 aa3.13□□□□□ -1.91
SSN2YDR443C MTR4P47047 1073 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C RSC1P53236 928 aa3.13□□□□□ -1.91
SSN2YDR443C TRS120Q04183 1289 aa3.13□□□□□ -1.91
SSN2YDR443C PDR12Q02785 1511 aa3.13□□□□□ -1.91
SSN2YDR443C TRM3Q07527 1436 aa3.13□□□□□ -1.91
SSN2YDR443C TFB2Q02939 513 aa3.13□□□□□ -1.91
SSN2YDR443C PGI1P12709 554 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C CYC8P14922 966 aa3.13□□□□□ -1.91
SSN2YDR443C MRS6P32864 603 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C IES5P40060 125 aa3.13□□□□□ -1.91
SSN2YDR443C MEP1P40260 492 aa3.13□□□□□ -1.91
SSN2YDR443C STR2P47164 639 aa3.13□□□□□ -1.91
SSN2YDR443C OPI10Q08202 246 aa3.13□□□□□ -1.91
SSN2YDR443C PUS1Q12211 544 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C SPP41P38904 1435 aa3.13□□□□□ -1.91
SSN2YDR443C SNQ2P32568 1501 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C BAS1P22035 811 aa3.13□□□□□ -1.91
SSN2YDR443C VAN1P23642 535 aa3.13□□□□□ -1.91
SSN2YDR443C PEX6P33760 1030 aa3.13□□□□□ -1.91
SSN2YDR443C APL2P36000 726 aaPredicted RBP3.13□□□□□ -1.91
SSN2YDR443C EXO84P38261 753 aa3.13□□□□□ -1.91
SSN2YDR443C YHR020WP38708 688 aaKnown RBP3.13□□□□□ -1.91
SSN2YDR443C CHZ1P40019 153 aaPredicted RBP3.13□□□□□ -1.91
SSN2YDR443C YNL034WP53963 612 aa3.13□□□□□ -1.91
SSN2YDR443C YNL018CP53976 612 aa3.13□□□□□ -1.91
SSN2YDR443C RPB10P22139 70 aa3.12□□□□□ -1.91
SSN2YDR443C ERO1Q03103 563 aa3.12□□□□□ -1.91
SSN2YDR443C FAL1Q12099 399 aaKnown RBP3.12□□□□□ -1.91
SSN2YDR443C SPF1P39986 1215 aaKnown RBP3.12□□□□□ -1.91
SSN2YDR443C SYH1Q02875 849 aaKnown RBP3.12□□□□□ -1.91
SSN2YDR443C VPS5Q92331 675 aa3.12□□□□□ -1.91
SSN2YDR443C NUP170P38181 1502 aa3.12□□□□□ -1.91
SSN2YDR443C YOR093CQ12275 1648 aa3.12□□□□□ -1.91
SSN2YDR443C CCP1P00431 361 aa3.12□□□□□ -1.91
SSN2YDR443C APA1P16550 321 aaKnown RBP3.12□□□□□ -1.91
SSN2YDR443C BUD31P25337 157 aaPredicted RBP3.12□□□□□ -1.91
SSN2YDR443C KIP2P28743 706 aa3.12□□□□□ -1.91
SSN2YDR443C GUT1P32190 709 aa3.12□□□□□ -1.91
SSN2YDR443C TFC4P33339 1025 aa3.12□□□□□ -1.91
SSN2YDR443C PAF1P38351 445 aa3.12□□□□□ -1.91
SSN2YDR443C SOL3P38858 249 aa3.12□□□□□ -1.91
SSN2YDR443C SAM37P50110 327 aa3.12□□□□□ -1.91
SSN2YDR443C SPC105P53148 917 aa3.12□□□□□ -1.91
SSN2YDR443C RMD1Q03441 430 aa3.12□□□□□ -1.91
SSN2YDR443C BDS1Q08347 646 aa3.12□□□□□ -1.91
SSN2YDR443C SST2P11972 698 aaKnown RBP3.11□□□□□ -1.91
SSN2YDR443C FAA3P39002 694 aa3.11□□□□□ -1.91
SSN2YDR443C CTF4Q01454 927 aa3.11□□□□□ -1.91
SSN2YDR443C FAP7Q12055 197 aaPredicted RBP3.11□□□□□ -1.91
SSN2YDR443C BUD3P25558 1636 aa3.11□□□□□ -1.91
SSN2YDR443C MSM1P22438 575 aa3.11□□□□□ -1.91
SSN2YDR443C SSH4P32343 579 aa3.11□□□□□ -1.91
SSN2YDR443C FAF1P40546 346 aaPredicted RBP3.11□□□□□ -1.91
SSN2YDR443C PSR1Q07800 427 aa3.11□□□□□ -1.91
SSN2YDR443C TSC11P40061 1430 aa3.11□□□□□ -1.91
SSN2YDR443C MNR2P35724 969 aa3.11□□□□□ -1.91
SSN2YDR443C YBR184WP38299 523 aa3.11□□□□□ -1.91
SSN2YDR443C BNA1P47096 177 aa3.11□□□□□ -1.91
SSN2YDR443C PEX14P53112 341 aa3.11□□□□□ -1.91
SSN2YDR443C SRP1Q02821 542 aaKnown RBP3.11□□□□□ -1.91
SSN2YDR443C ESC2Q06340 456 aa3.11□□□□□ -1.91
SSN2YDR443C TUM1Q08686 304 aaKnown RBP3.11□□□□□ -1.91
SSN2YDR443C OSH2Q12451 1283 aa3.11□□□□□ -1.91
SSN2YDR443C SXM1Q04175 944 aaKnown RBP3.1□□□□□ -1.91
SSN2YDR443C VIP1Q06685 1146 aaKnown RBP3.1□□□□□ -1.91
SSN2YDR443C OXR1Q08952 273 aa3.1□□□□□ -1.91
SSN2YDR443C MSB4Q12317 492 aa3.1□□□□□ -1.91
SSN2YDR443C TCB1Q12466 1186 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms