RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UME6	YDR207C	CDC10	P25342	322 aa	Known RBP	11.8	□□□□□ -0.52
UME6	YDR207C	TFC3	P34111	1160 aa		11.8	□□□□□ -0.52
UME6	YDR207C	MUD2	P36084	527 aa	Known RBP	11.8	□□□□□ -0.52
UME6	YDR207C	TAF5	P38129	798 aa		11.8	□□□□□ -0.52
UME6	YDR207C	SSZ1	P38788	538 aa	Known RBP	11.8	□□□□□ -0.52
UME6	YDR207C	GYP7	P48365	746 aa		11.8	□□□□□ -0.52
UME6	YDR207C	SGD1	Q06132	899 aa		11.8	□□□□□ -0.52
UME6	YDR207C	TSR2	Q06672	205 aa	Known RBP	11.8	□□□□□ -0.52
UME6	YDR207C	TUP1	P16649	713 aa		11.8	□□□□□ -0.52
UME6	YDR207C	CCT5	P40413	562 aa	Known RBP	11.8	□□□□□ -0.52
UME6	YDR207C	ATG36	P46983	293 aa		11.8	□□□□□ -0.52
UME6	YDR207C	SFB2	P53953	876 aa		11.8	□□□□□ -0.52
UME6	YDR207C	YPR172W	Q06608	200 aa		11.8	□□□□□ -0.52
UME6	YDR207C	YML133C	Q03099	1374 aa		11.79	□□□□□ -0.52
UME6	YDR207C	YLL067C	Q07888	1374 aa		11.79	□□□□□ -0.52
UME6	YDR207C	YLL066C	Q99208	1374 aa		11.79	□□□□□ -0.52
UME6	YDR207C	CDC25	P04821	1589 aa		11.79	□□□□□ -0.52
UME6	YDR207C	STE23	Q06010	1027 aa		11.79	□□□□□ -0.52
UME6	YDR207C	SSA4	P22202	642 aa	Known RBP	11.79	□□□□□ -0.52
UME6	YDR207C	YPR097W	Q06839	1073 aa		11.79	□□□□□ -0.52
UME6	YDR207C	MCM16	Q12262	181 aa		11.79	□□□□□ -0.52
UME6	YDR207C	LYS2	P07702	1392 aa		11.79	□□□□□ -0.52
UME6	YDR207C	DRS2	P39524	1355 aa		11.79	□□□□□ -0.52
UME6	YDR207C	RPC19	P28000	142 aa	Known RBP	11.78	□□□□□ -0.52
UME6	YDR207C	BUD2	P33314	1104 aa		11.78	□□□□□ -0.52
UME6	YDR207C	REI1	P38344	393 aa	Predicted RBP	11.78	□□□□□ -0.52
UME6	YDR207C	SDA1	P53313	767 aa	Known RBP	11.78	□□□□□ -0.52
UME6	YDR207C	RNR2	P09938	399 aa	Known RBP	11.78	□□□□□ -0.52
UME6	YDR207C	IES2	P40154	320 aa		11.78	□□□□□ -0.52
UME6	YDR207C	HXT17	P53631	564 aa		11.78	□□□□□ -0.52
UME6	YDR207C	ARG1	P22768	420 aa		11.77	□□□□□ -0.53
UME6	YDR207C	PCH2	P38126	564 aa		11.77	□□□□□ -0.53
UME6	YDR207C	CCT4	P39078	528 aa	Known RBP	11.77	□□□□□ -0.53
UME6	YDR207C	RIA1	P53893	1110 aa		11.77	□□□□□ -0.53
UME6	YDR207C	VAM6	Q07468	1049 aa		11.77	□□□□□ -0.53
UME6	YDR207C	FRS2	P15625	503 aa	Known RBP	11.77	□□□□□ -0.53
UME6	YDR207C	PIH1	P38768	344 aa		11.77	□□□□□ -0.53
UME6	YDR207C	ERB1	Q04660	807 aa	Known RBP	11.77	□□□□□ -0.53
UME6	YDR207C	RPN2	P32565	945 aa	Known RBP	11.76	□□□□□ -0.53
UME6	YDR207C	RCM1	P53972	490 aa		11.76	□□□□□ -0.53
UME6	YDR207C	VTC3	Q02725	835 aa		11.76	□□□□□ -0.53
UME6	YDR207C	RAV1	P47104	1357 aa		11.76	□□□□□ -0.53
UME6	YDR207C	CSE4	P36012	229 aa		11.76	□□□□□ -0.53
UME6	YDR207C	YSW1	P38280	609 aa		11.76	□□□□□ -0.53
UME6	YDR207C	RTR1	P40084	226 aa	Predicted RBP	11.76	□□□□□ -0.53
UME6	YDR207C	GCN20	P43535	752 aa	Known RBP	11.76	□□□□□ -0.53
UME6	YDR207C	YGL242C	P53066	181 aa		11.76	□□□□□ -0.53
UME6	YDR207C	ESF2	P53743	316 aa	Known RBP	11.76	□□□□□ -0.53
UME6	YDR207C	SPN1	Q06505	410 aa	Predicted RBP	11.76	□□□□□ -0.53
UME6	YDR207C	DNL4	Q08387	944 aa	Predicted RBP	11.76	□□□□□ -0.53
UME6	YDR207C	JIP3	O13555	125 aa		11.75	□□□□□ -0.53
UME6	YDR207C	GGA2	P38817	585 aa	Known RBP	11.75	□□□□□ -0.53
UME6	YDR207C	SYG1	P40528	902 aa		11.75	□□□□□ -0.53
UME6	YDR207C	HEL2	Q05580	639 aa	Known RBP	11.75	□□□□□ -0.53
UME6	YDR207C	MPC54	Q08550	464 aa		11.75	□□□□□ -0.53
UME6	YDR207C	YOR296W	Q08748	1289 aa		11.75	□□□□□ -0.53
UME6	YDR207C	SWI1	P09547	1314 aa		11.75	□□□□□ -0.53
UME6	YDR207C	YBT1	P32386	1661 aa		11.75	□□□□□ -0.53
UME6	YDR207C	KCC4	P25389	1037 aa		11.75	□□□□□ -0.53
UME6	YDR207C	BUD7	Q08754	746 aa		11.75	□□□□□ -0.53
UME6	YDR207C	NAT1	P12945	854 aa	Known RBP	11.74	□□□□□ -0.53
UME6	YDR207C	MBR1	P23493	339 aa		11.74	□□□□□ -0.53
UME6	YDR207C	NPL6	P32832	435 aa		11.74	□□□□□ -0.53
UME6	YDR207C	RIB7	P33312	244 aa		11.74	□□□□□ -0.53
UME6	YDR207C	SHE10	P53075	577 aa		11.74	□□□□□ -0.53
UME6	YDR207C	RRP46	P53256	223 aa	Predicted RBP	11.74	□□□□□ -0.53
UME6	YDR207C	RPO26	P20435	155 aa		11.74	□□□□□ -0.53
UME6	YDR207C	SMY2	P32909	740 aa	Known RBP	11.74	□□□□□ -0.53
UME6	YDR207C	YIL001W	P40560	513 aa		11.74	□□□□□ -0.53
UME6	YDR207C	RBL2	P48606	106 aa	Known RBP	11.74	□□□□□ -0.53
UME6	YDR207C	HOS2	P53096	452 aa	Predicted RBP	11.74	□□□□□ -0.53
UME6	YDR207C	GDE1	Q02979	1223 aa		11.74	□□□□□ -0.53
UME6	YDR207C	IME1	P21190	360 aa		11.73	□□□□□ -0.53
UME6	YDR207C	UBC1	P21734	215 aa	Known RBP	11.73	□□□□□ -0.53
UME6	YDR207C	STB1	P42845	420 aa		11.73	□□□□□ -0.53
UME6	YDR207C	NCS2	P53923	493 aa	Predicted RBP	11.73	□□□□□ -0.53
UME6	YDR207C	MGR3	Q04472	501 aa		11.73	□□□□□ -0.53
UME6	YDR207C	YIG1	Q08956	461 aa		11.73	□□□□□ -0.53
UME6	YDR207C	YJR079W	P47126	109 aa		11.73	□□□□□ -0.53
UME6	YDR207C	ADH4	P10127	382 aa		11.72	□□□□□ -0.53
UME6	YDR207C	HIR2	P32480	875 aa		11.72	□□□□□ -0.53
UME6	YDR207C	SIP3	P38717	1229 aa		11.72	□□□□□ -0.53
UME6	YDR207C	MET10	P39692	1035 aa		11.72	□□□□□ -0.53
UME6	YDR207C	SPC72	P39723	622 aa		11.72	□□□□□ -0.53
UME6	YDR207C	MSN5	P52918	1224 aa		11.72	□□□□□ -0.53
UME6	YDR207C	TFC8	Q12308	588 aa		11.72	□□□□□ -0.53
UME6	YDR207C	VAS1	P07806	1104 aa	Known RBP	11.71	□□□□□ -0.53
UME6	YDR207C	TYR1	P20049	452 aa		11.71	□□□□□ -0.53
UME6	YDR207C	ATO2	P32907	282 aa		11.71	□□□□□ -0.53
UME6	YDR207C	ATG3	P40344	310 aa		11.71	□□□□□ -0.53
UME6	YDR207C	RSM28	Q03430	361 aa		11.71	□□□□□ -0.53
UME6	YDR207C	YML108W	Q03759	105 aa		11.71	□□□□□ -0.53
UME6	YDR207C	NOP12	Q08208	459 aa	Known RBP	11.71	□□□□□ -0.53
UME6	YDR207C	SNT2	P53127	1403 aa		11.71	□□□□□ -0.53
UME6	YDR207C	UGA3	P26370	528 aa		11.71	□□□□□ -0.53
UME6	YDR207C	TBS1	P38114	1094 aa		11.71	□□□□□ -0.53
UME6	YDR207C	FMS1	P50264	508 aa		11.71	□□□□□ -0.53
UME6	YDR207C	TFB2	Q02939	513 aa		11.71	□□□□□ -0.53
UME6	YDR207C	SLK19	Q08581	821 aa	Known RBP	11.71	□□□□□ -0.53
UME6	YDR207C	HCA4	P20448	770 aa	Known RBP	11.7	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 33 ms