RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	DRS2	P39524	1355 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	TUP1	P16649	713 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	GAL11	P19659	1081 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	STE11	P23561	717 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	CDC10	P25342	322 aa	Known RBP	5.75	□□□□□ -1.49
DBF4	YDR052C	BUD2	P33314	1104 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	MUD2	P36084	527 aa	Known RBP	5.75	□□□□□ -1.49
DBF4	YDR052C	MAD1	P40957	749 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	MRX12	P47084	519 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	ILM1	P47155	203 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	FAR8	Q05040	523 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	YLR257W	Q06146	321 aa	Known RBP	5.75	□□□□□ -1.49
DBF4	YDR052C	YML133C	Q03099	1374 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	YLL067C	Q07888	1374 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	YLL066C	Q99208	1374 aa		5.75	□□□□□ -1.49
DBF4	YDR052C	SUI3	P09064	285 aa	Known RBP	5.74	□□□□□ -1.49
DBF4	YDR052C	GCD2	P12754	651 aa	Predicted RBP	5.74	□□□□□ -1.49
DBF4	YDR052C	SSA4	P22202	642 aa	Known RBP	5.74	□□□□□ -1.49
DBF4	YDR052C	VPS53	P47061	822 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	VTC3	Q02725	835 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	MFM1	Q02783	413 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	HEL2	Q05580	639 aa	Known RBP	5.74	□□□□□ -1.49
DBF4	YDR052C	DNL4	Q08387	944 aa	Predicted RBP	5.74	□□□□□ -1.49
DBF4	YDR052C	MCM16	Q12262	181 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	LYS2	P07702	1392 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	RAV1	P47104	1357 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-LR1	P0C2J3	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-F	P0CX63	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-GR2	P0CX64	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-C	P25384	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-DR2	Q03494	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY1B-DR1	Q03855	1755 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-DR3	Q07791	1770 aa	Known RBP	5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-OR1	Q12113	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-DR1	Q12472	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-B	Q12491	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY2B-OR2	Q12501	1770 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TY1B-DR3	Q99231	1755 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	MBR1	P23493	339 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	TFC3	P34111	1160 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	PCH2	P38126	564 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	PIH1	P38768	344 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	SSZ1	P38788	538 aa	Known RBP	5.74	□□□□□ -1.49
DBF4	YDR052C	HXT17	P53631	564 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	RCM1	P53972	490 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	STE23	Q06010	1027 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	NKP2	Q06162	153 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	VAM6	Q07468	1049 aa		5.74	□□□□□ -1.49
DBF4	YDR052C	FRS2	P15625	503 aa	Known RBP	5.73	□□□□□ -1.49
DBF4	YDR052C	ARG1	P22768	420 aa		5.73	□□□□□ -1.49
DBF4	YDR052C	KCC4	P25389	1037 aa		5.73	□□□□□ -1.49
DBF4	YDR052C	CCT5	P40413	562 aa	Known RBP	5.73	□□□□□ -1.49
DBF4	YDR052C	SET2	P46995	733 aa	Known RBP	5.73	□□□□□ -1.49
DBF4	YDR052C	SDA1	P53313	767 aa	Known RBP	5.73	□□□□□ -1.49
DBF4	YDR052C	EIS1	Q05050	843 aa	Known RBP	5.73	□□□□□ -1.49
DBF4	YDR052C	SGD1	Q06132	899 aa		5.73	□□□□□ -1.49
DBF4	YDR052C	TSR2	Q06672	205 aa	Known RBP	5.73	□□□□□ -1.49
DBF4	YDR052C	YOR296W	Q08748	1289 aa		5.73	□□□□□ -1.49
DBF4	YDR052C	YIG1	Q08956	461 aa		5.73	□□□□□ -1.49
DBF4	YDR052C	IME1	P21190	360 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	UGA3	P26370	528 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	RPC19	P28000	142 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	TAF5	P38129	798 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	YSW1	P38280	609 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	SYG1	P40528	902 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	GCN20	P43535	752 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	YGL242C	P53066	181 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	RRP46	P53256	223 aa	Predicted RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	RIA1	P53893	1110 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	SFB2	P53953	876 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	REX2	P54964	269 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	GDE1	Q02979	1223 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	SPN1	Q06505	410 aa	Predicted RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	YPR097W	Q06839	1073 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	ADH4	P10127	382 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	RPN2	P32565	945 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	ATO2	P32907	282 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	RIB7	P33312	244 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	CSE4	P36012	229 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	REI1	P38344	393 aa	Predicted RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	DMA1	P38823	416 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	CCT4	P39078	528 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	STB1	P42845	420 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	RBL2	P48606	106 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	SHE10	P53075	577 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	NCS2	P53923	493 aa	Predicted RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	RSM28	Q03430	361 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	ERB1	Q04660	807 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	PSK2	Q08217	1101 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	SLK19	Q08581	821 aa	Known RBP	5.72	□□□□□ -1.49
DBF4	YDR052C	BUD7	Q08754	746 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	TFC8	Q12308	588 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	SNT2	P53127	1403 aa		5.72	□□□□□ -1.49
DBF4	YDR052C	RNR2	P09938	399 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	NAT1	P12945	854 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	GGA2	P38817	585 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	MSN5	P52918	1224 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	HOS2	P53096	452 aa	Predicted RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	MPC54	Q08550	464 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	MLP1	Q02455	1875 aa	Known RBP	5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms