RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C CDC55Q00362 526 aa3.54□□□□□ -1.84
SOK1YDR006C GDE1Q02979 1223 aa3.54□□□□□ -1.84
SOK1YDR006C ESF1Q06344 628 aaKnown RBP3.54□□□□□ -1.84
SOK1YDR006C PSR1Q07800 427 aa3.54□□□□□ -1.84
SOK1YDR006C PSK2Q08217 1101 aa3.54□□□□□ -1.84
SOK1YDR006C TIF6Q12522 245 aaKnown RBP3.54□□□□□ -1.84
SOK1YDR006C THS1P04801 734 aaKnown RBP3.53□□□□□ -1.84
SOK1YDR006C HEM13P11353 328 aaKnown RBP3.53□□□□□ -1.84
SOK1YDR006C AMS1P22855 1083 aa3.53□□□□□ -1.84
SOK1YDR006C KIP2P28743 706 aa3.53□□□□□ -1.84
SOK1YDR006C MLF3P32047 452 aa3.53□□□□□ -1.84
SOK1YDR006C MAL11P53048 616 aa3.53□□□□□ -1.84
SOK1YDR006C YNL011CP53980 444 aa3.53□□□□□ -1.84
SOK1YDR006C COG4Q06096 861 aa3.53□□□□□ -1.84
SOK1YDR006C MSN1P22148 382 aa3.53□□□□□ -1.84
SOK1YDR006C MKS1P34072 584 aa3.53□□□□□ -1.84
SOK1YDR006C FPR3P38911 411 aaKnown RBP3.53□□□□□ -1.84
SOK1YDR006C YFL034WP43564 1073 aa3.53□□□□□ -1.84
SOK1YDR006C SUM1P46676 1062 aa3.53□□□□□ -1.84
SOK1YDR006C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SOK1YDR006C SLA1P32790 1244 aa3.52□□□□□ -1.85
SOK1YDR006C BSD2P38356 321 aa3.52□□□□□ -1.85
SOK1YDR006C PIC2P40035 300 aa3.52□□□□□ -1.85
SOK1YDR006C AIR1P40507 360 aaKnown RBP3.52□□□□□ -1.85
SOK1YDR006C SYH1Q02875 849 aaKnown RBP3.52□□□□□ -1.85
SOK1YDR006C Q0182Q9ZZW1 134 aa3.52□□□□□ -1.85
SOK1YDR006C NMD3P38861 518 aaKnown RBP3.52□□□□□ -1.85
SOK1YDR006C RRP8P38961 392 aaKnown RBP3.52□□□□□ -1.85
SOK1YDR006C YJR120WP47157 116 aa3.52□□□□□ -1.85
SOK1YDR006C YGR122WP53272 402 aa3.52□□□□□ -1.85
SOK1YDR006C YNR029CP53729 429 aaKnown RBP3.52□□□□□ -1.85
SOK1YDR006C MCM1P11746 286 aa3.51□□□□□ -1.85
SOK1YDR006C RPC31P17890 251 aa3.51□□□□□ -1.85
SOK1YDR006C PAT1P25644 796 aaKnown RBP3.51□□□□□ -1.85
SOK1YDR006C MGE1P38523 228 aa3.51□□□□□ -1.85
SOK1YDR006C TRX2P22803 104 aaKnown RBP3.51□□□□□ -1.85
SOK1YDR006C HXT8P40886 569 aa3.51□□□□□ -1.85
SOK1YDR006C SPR3P41901 512 aa3.51□□□□□ -1.85
SOK1YDR006C FAA4P47912 694 aaKnown RBP3.51□□□□□ -1.85
SOK1YDR006C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
SOK1YDR006C ECM16Q04217 1267 aaKnown RBP3.51□□□□□ -1.85
SOK1YDR006C NHA1Q99271 985 aa3.51□□□□□ -1.85
SOK1YDR006C QCR6P00127 147 aa3.5□□□□□ -1.85
SOK1YDR006C MAL31P38156 614 aa3.5□□□□□ -1.85
SOK1YDR006C MNN1P39106 762 aa3.5□□□□□ -1.85
SOK1YDR006C QDR2P40474 542 aa3.5□□□□□ -1.85
SOK1YDR006C GNP1P48813 663 aa3.5□□□□□ -1.85
SOK1YDR006C UFD2P54860 961 aa3.5□□□□□ -1.85
SOK1YDR006C CEF1Q03654 590 aaPredicted RBP3.5□□□□□ -1.85
SOK1YDR006C DAT1P13483 248 aaKnown RBP3.5□□□□□ -1.85
SOK1YDR006C TIM23P32897 222 aa3.5□□□□□ -1.85
SOK1YDR006C STE5P32917 917 aa3.5□□□□□ -1.85
SOK1YDR006C MNN4P36044 1178 aa3.5□□□□□ -1.85
SOK1YDR006C ERP2P39704 215 aa3.5□□□□□ -1.85
SOK1YDR006C YGR021WP53212 290 aa3.5□□□□□ -1.85
SOK1YDR006C CDC45Q08032 650 aa3.5□□□□□ -1.85
SOK1YDR006C INP54Q08227 384 aaKnown RBP3.5□□□□□ -1.85
SOK1YDR006C POL4P25615 582 aa3.5□□□□□ -1.85
SOK1YDR006C RAD27P26793 382 aa3.5□□□□□ -1.85
SOK1YDR006C YEN1P40028 759 aa3.5□□□□□ -1.85
SOK1YDR006C TMA64Q04600 565 aaKnown RBP3.5□□□□□ -1.85
SOK1YDR006C EMG1Q06287 252 aaKnown RBP3.5□□□□□ -1.85
SOK1YDR006C RRI2Q12348 645 aa3.5□□□□□ -1.85
SOK1YDR006C PUF4P25339 888 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SOK1YDR006C MCM5P29496 775 aaKnown RBP3.49□□□□□ -1.85
SOK1YDR006C ECM32P32644 1121 aaKnown RBP3.49□□□□□ -1.85
SOK1YDR006C RPS0AP32905 252 aaKnown RBP3.49□□□□□ -1.85
SOK1YDR006C HUL5P53119 910 aa3.49□□□□□ -1.85
SOK1YDR006C YGR053CP53234 283 aa3.49□□□□□ -1.85
SOK1YDR006C GCR2Q01722 534 aa3.49□□□□□ -1.85
SOK1YDR006C EEB1Q02891 456 aa3.49□□□□□ -1.85
SOK1YDR006C BSC2Q05611 235 aa3.49□□□□□ -1.85
SOK1YDR006C ESC2Q06340 456 aa3.49□□□□□ -1.85
SOK1YDR006C PPG1P32838 368 aa3.48□□□□□ -1.85
SOK1YDR006C VPS35P34110 944 aa3.48□□□□□ -1.85
SOK1YDR006C RPT2P40327 437 aaKnown RBP3.48□□□□□ -1.85
SOK1YDR006C NTA1P40354 457 aa3.48□□□□□ -1.85
SOK1YDR006C JJJ2P46997 583 aa3.48□□□□□ -1.85
SOK1YDR006C CWH41P53008 833 aa3.48□□□□□ -1.85
SOK1YDR006C FLP1P03870 423 aa3.48□□□□□ -1.85
SOK1YDR006C ERR1P0CX10 437 aa3.48□□□□□ -1.85
SOK1YDR006C ERR2P0CX11 437 aa3.48□□□□□ -1.85
SOK1YDR006C RPL8AP17076 256 aaKnown RBP3.48□□□□□ -1.85
SOK1YDR006C GRX1P25373 110 aaKnown RBP3.48□□□□□ -1.85
SOK1YDR006C SNF7P39929 240 aaKnown RBP3.48□□□□□ -1.85
SOK1YDR006C VID27P40157 782 aa3.48□□□□□ -1.85
SOK1YDR006C PSY2P40164 858 aa3.48□□□□□ -1.85
SOK1YDR006C YNR040WP53736 256 aa3.48□□□□□ -1.85
SOK1YDR006C DAL4Q04895 635 aa3.48□□□□□ -1.85
SOK1YDR006C ERP4Q12450 207 aa3.48□□□□□ -1.85
SOK1YDR006C GCR1P07261 785 aa3.47□□□□□ -1.85
SOK1YDR006C GAR1P28007 205 aaKnown RBP3.47□□□□□ -1.85
SOK1YDR006C YKL091CP33324 310 aaKnown RBP3.47□□□□□ -1.85
SOK1YDR006C SCD5P34758 872 aa3.47□□□□□ -1.85
SOK1YDR006C RTT106P40161 455 aa3.47□□□□□ -1.85
SOK1YDR006C YPL109CQ02981 657 aa3.47□□□□□ -1.85
SOK1YDR006C CIT1P00890 479 aa3.47□□□□□ -1.85
SOK1YDR006C TPM1P17536 199 aaKnown RBP3.47□□□□□ -1.85
SOK1YDR006C PRI2P20457 528 aa3.47□□□□□ -1.85
SOK1YDR006C PRE9P23638 258 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms