RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W SPR28Q04921 423 aa5.77□□□□□ -1.49
UBC9YDL064W YDR461C-AQ2V2P7 80 aa5.77□□□□□ -1.49
UBC9YDL064W GCD6P32501 712 aaKnown RBP5.76□□□□□ -1.49
UBC9YDL064W MON1P53129 644 aa5.76□□□□□ -1.49
UBC9YDL064W HEH2Q03281 663 aa5.76□□□□□ -1.49
UBC9YDL064W DAL4Q04895 635 aa5.76□□□□□ -1.49
UBC9YDL064W UGA4P32837 571 aa5.75□□□□□ -1.49
UBC9YDL064W CIC1P38779 376 aaKnown RBP5.75□□□□□ -1.49
UBC9YDL064W FAA3P39002 694 aa5.75□□□□□ -1.49
UBC9YDL064W RPS26AP39938 119 aaKnown RBP5.75□□□□□ -1.49
UBC9YDL064W RPS26BP39939 119 aaKnown RBP5.75□□□□□ -1.49
UBC9YDL064W GBP2P25555 427 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
UBC9YDL064W ECM2P38241 364 aaKnown RBP5.73□□□□□ -1.49
UBC9YDL064W LYS5P50113 272 aa5.73□□□□□ -1.49
UBC9YDL064W NUT1P53114 1132 aa5.73□□□□□ -1.49
UBC9YDL064W ALD3P54114 506 aa5.73□□□□□ -1.49
UBC9YDL064W YCS4Q06156 1176 aa5.73□□□□□ -1.49
UBC9YDL064W OXR1Q08952 273 aa5.73□□□□□ -1.49
UBC9YDL064W HXK1P04806 485 aaKnown RBP5.72□□□□□ -1.49
UBC9YDL064W RPP1AP05318 106 aaPredicted RBP5.72□□□□□ -1.49
UBC9YDL064W PRP40P33203 583 aaKnown RBP5.72□□□□□ -1.49
UBC9YDL064W TFA2P36145 328 aa5.72□□□□□ -1.49
UBC9YDL064W GLO4Q12320 285 aa5.72□□□□□ -1.49
UBC9YDL064W RIM11P38615 370 aa5.71□□□□□ -1.5
UBC9YDL064W INP51P40559 946 aaKnown RBP5.71□□□□□ -1.5
UBC9YDL064W HPF1Q05164 967 aa5.71□□□□□ -1.5
UBC9YDL064W RSC2Q06488 889 aa5.71□□□□□ -1.5
UBC9YDL064W FUS1P11710 512 aa5.7□□□□□ -1.5
UBC9YDL064W CYC8P14922 966 aa5.7□□□□□ -1.5
UBC9YDL064W MCM5P29496 775 aaKnown RBP5.7□□□□□ -1.5
UBC9YDL064W PEP7P32609 515 aa5.7□□□□□ -1.5
UBC9YDL064W YGR122WP53272 402 aa5.7□□□□□ -1.5
UBC9YDL064W BIO5P53744 561 aaKnown RBP5.7□□□□□ -1.5
UBC9YDL064W MSH6Q03834 1242 aa5.7□□□□□ -1.5
UBC9YDL064W CMR1Q12510 522 aaKnown RBP5.7□□□□□ -1.5
UBC9YDL064W YJR124CP47159 448 aa5.69□□□□□ -1.5
UBC9YDL064W NOP7P53261 605 aaKnown RBP5.69□□□□□ -1.5
UBC9YDL064W GPM1P00950 247 aaKnown RBP5.68□□□□□ -1.5
UBC9YDL064W RAD2P07276 1031 aa5.68□□□□□ -1.5
UBC9YDL064W PDC5P16467 563 aaKnown RBP5.68□□□□□ -1.5
UBC9YDL064W NPR1P22211 790 aa5.68□□□□□ -1.5
UBC9YDL064W AMN1P38285 549 aaPredicted RBP5.68□□□□□ -1.5
UBC9YDL064W MET10P39692 1035 aa5.68□□□□□ -1.5
UBC9YDL064W SAP155P43612 1002 aa5.68□□□□□ -1.5
UBC9YDL064W ULP1Q02724 621 aa5.68□□□□□ -1.5
UBC9YDL064W YPL109CQ02981 657 aa5.68□□□□□ -1.5
UBC9YDL064W HVG1P0CE11 249 aa5.67□□□□□ -1.5
UBC9YDL064W RVS167P39743 482 aaKnown RBP5.67□□□□□ -1.5
UBC9YDL064W LSB6P42951 607 aa5.67□□□□□ -1.5
UBC9YDL064W JJJ3P47138 172 aa5.67□□□□□ -1.5
UBC9YDL064W SOK2P53438 785 aaPredicted RBP5.67□□□□□ -1.5
UBC9YDL064W JIP5Q06214 492 aaPredicted RBP5.67□□□□□ -1.5
UBC9YDL064W PRP5P21372 849 aaPredicted RBP5.66□□□□□ -1.5
UBC9YDL064W PIC2P40035 300 aa5.66□□□□□ -1.5
UBC9YDL064W YNR065CP53751 1116 aa5.66□□□□□ -1.5
UBC9YDL064W YAF9P53930 226 aa5.66□□□□□ -1.5
UBC9YDL064W SOG2Q08817 791 aa5.66□□□□□ -1.5
UBC9YDL064W NAR1P23503 491 aaKnown RBP5.65□□□□□ -1.5
UBC9YDL064W YGR035CP53222 116 aa5.65□□□□□ -1.5
UBC9YDL064W PMT7Q06644 662 aa5.65□□□□□ -1.5
UBC9YDL064W KAR2P16474 682 aaKnown RBP5.64□□□□□ -1.51
UBC9YDL064W PRE9P23638 258 aaKnown RBP5.64□□□□□ -1.51
UBC9YDL064W KNS1P32350 737 aaPredicted RBP5.64□□□□□ -1.51
UBC9YDL064W MRPS18P42847 217 aa5.64□□□□□ -1.51
UBC9YDL064W ADI1Q03677 179 aa5.64□□□□□ -1.51
UBC9YDL064W PGM2P37012 569 aaKnown RBP5.63□□□□□ -1.51
UBC9YDL064W GIP2P40036 548 aa5.63□□□□□ -1.51
UBC9YDL064W HAS1Q03532 505 aaKnown RBP5.63□□□□□ -1.51
UBC9YDL064W GIS4Q04233 774 aa5.63□□□□□ -1.51
UBC9YDL064W ESF1Q06344 628 aaKnown RBP5.63□□□□□ -1.51
UBC9YDL064W MAG2Q06436 670 aaKnown RBP5.63□□□□□ -1.51
UBC9YDL064W DPH6Q12429 685 aa5.63□□□□□ -1.51
UBC9YDL064W ALG14P38242 237 aa5.62□□□□□ -1.51
UBC9YDL064W NEO1P40527 1151 aa5.62□□□□□ -1.51
UBC9YDL064W TED1P40533 473 aa5.62□□□□□ -1.51
UBC9YDL064W PEX13P80667 386 aa5.62□□□□□ -1.51
UBC9YDL064W HEM13P11353 328 aaKnown RBP5.61□□□□□ -1.51
UBC9YDL064W PEX28P38848 579 aa5.61□□□□□ -1.51
UBC9YDL064W FET4P40988 552 aa5.61□□□□□ -1.51
UBC9YDL064W RSM26P47141 266 aa5.61□□□□□ -1.51
UBC9YDL064W GUP1P53154 560 aa5.61□□□□□ -1.51
UBC9YDL064W RMD1Q03441 430 aa5.61□□□□□ -1.51
UBC9YDL064W SVF1Q05515 481 aa5.61□□□□□ -1.51
UBC9YDL064W MCD1Q12158 566 aa5.61□□□□□ -1.51
UBC9YDL064W HTS1P07263 546 aaKnown RBP5.6□□□□□ -1.51
UBC9YDL064W TY1A-LR4P0C2I8 440 aaKnown RBP5.6□□□□□ -1.51
UBC9YDL064W TY1A-DR6P0CX70 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-ER1P0CX71 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-LR2P0CX72 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-PLP0CX73 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-JR1P0CX74 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-LR3P0CX75 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-ML2P0CX76 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-GR1Q12085 440 aa5.6□□□□□ -1.51
UBC9YDL064W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.6□□□□□ -1.51
UBC9YDL064W TY1A-OLQ92392 440 aaKnown RBP5.6□□□□□ -1.51
UBC9YDL064W GCR1P07261 785 aa5.59□□□□□ -1.51
UBC9YDL064W MSH3P25336 1018 aa5.59□□□□□ -1.51
UBC9YDL064W SQT1P35184 431 aa5.59□□□□□ -1.51
UBC9YDL064W PAN5P38787 379 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms