RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W SIT4P20604 311 aa8.14□□□□□ -1.11
CDC7YDL017W LCB1P25045 558 aaKnown RBP8.14□□□□□ -1.11
CDC7YDL017W RER2P35196 286 aa8.14□□□□□ -1.11
CDC7YDL017W SIS2P36024 562 aa8.14□□□□□ -1.11
CDC7YDL017W RFC5P38251 354 aa8.14□□□□□ -1.11
CDC7YDL017W RPN1P38764 993 aaKnown RBP8.14□□□□□ -1.11
CDC7YDL017W ALD2P47771 506 aa8.14□□□□□ -1.11
CDC7YDL017W IRC4Q03036 179 aa8.14□□□□□ -1.11
CDC7YDL017W EST2Q06163 884 aa8.14□□□□□ -1.11
CDC7YDL017W MPH3P0CE00 602 aa8.13□□□□□ -1.11
CDC7YDL017W NPR3P38742 1146 aa8.13□□□□□ -1.11
CDC7YDL017W EPL1P43572 832 aa8.13□□□□□ -1.11
CDC7YDL017W SAS4Q04003 481 aa8.13□□□□□ -1.11
CDC7YDL017W IRC3Q06683 689 aa8.13□□□□□ -1.11
CDC7YDL017W FIG2P25653 1609 aa8.13□□□□□ -1.11
CDC7YDL017W CHO2P05374 869 aaKnown RBP8.13□□□□□ -1.11
CDC7YDL017W RPT3P33298 428 aaKnown RBP8.13□□□□□ -1.11
CDC7YDL017W SSA2P10592 639 aaKnown RBP8.12□□□□□ -1.11
CDC7YDL017W TAF13P11747 167 aa8.12□□□□□ -1.11
CDC7YDL017W MCM2P29469 868 aa8.12□□□□□ -1.11
CDC7YDL017W PTK1P36002 662 aaPredicted RBP8.12□□□□□ -1.11
CDC7YDL017W BOI1P38041 980 aaKnown RBP8.12□□□□□ -1.11
CDC7YDL017W PFF1P38244 976 aa8.12□□□□□ -1.11
CDC7YDL017W RRP8P38961 392 aaKnown RBP8.12□□□□□ -1.11
CDC7YDL017W GTT3P39996 337 aa8.12□□□□□ -1.11
CDC7YDL017W RPS15Q01855 142 aaKnown RBP8.12□□□□□ -1.11
CDC7YDL017W PGI1P12709 554 aaKnown RBP8.11□□□□□ -1.11
CDC7YDL017W PFK2P16862 959 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
CDC7YDL017W CBP3P21560 335 aa8.11□□□□□ -1.11
CDC7YDL017W MRPL32P25348 183 aa8.11□□□□□ -1.11
CDC7YDL017W MIC60P36112 540 aa8.11□□□□□ -1.11
CDC7YDL017W YFH7P43591 353 aa8.11□□□□□ -1.11
CDC7YDL017W UFD2P54860 961 aa8.11□□□□□ -1.11
CDC7YDL017W UBX2Q04228 584 aa8.11□□□□□ -1.11
CDC7YDL017W TRS33Q99394 268 aa8.11□□□□□ -1.11
CDC7YDL017W GPA1P08539 472 aa8.1□□□□□ -1.11
CDC7YDL017W DIT2P21595 489 aa8.1□□□□□ -1.11
CDC7YDL017W MPE1P35728 441 aaKnown RBP8.1□□□□□ -1.11
CDC7YDL017W MRPL10P36520 322 aa8.1□□□□□ -1.11
CDC7YDL017W YBL086CP38177 466 aa8.1□□□□□ -1.11
CDC7YDL017W RFT1P38206 574 aaPredicted RBP8.1□□□□□ -1.11
CDC7YDL017W AKR1P39010 764 aa8.1□□□□□ -1.11
CDC7YDL017W HDA1P53973 706 aa8.1□□□□□ -1.11
CDC7YDL017W SSL2Q00578 843 aa8.1□□□□□ -1.11
CDC7YDL017W PMD1P32634 1753 aa8.1□□□□□ -1.11
CDC7YDL017W ATE1P16639 503 aa8.09□□□□□ -1.11
CDC7YDL017W RTS1P38903 757 aa8.09□□□□□ -1.11
CDC7YDL017W PTK2P47116 818 aaKnown RBP8.09□□□□□ -1.11
CDC7YDL017W YPT11P48559 417 aa8.09□□□□□ -1.11
CDC7YDL017W CTR9P89105 1077 aa8.09□□□□□ -1.11
CDC7YDL017W ERO1Q03103 563 aa8.09□□□□□ -1.11
CDC7YDL017W TFC6Q06339 672 aa8.09□□□□□ -1.11
CDC7YDL017W PSF3Q12146 194 aa8.09□□□□□ -1.11
CDC7YDL017W HSP82P02829 709 aaKnown RBP8.08□□□□□ -1.12
CDC7YDL017W SNF3P10870 884 aa8.08□□□□□ -1.12
CDC7YDL017W SWI4P25302 1093 aaKnown RBP8.08□□□□□ -1.12
CDC7YDL017W SMY1P32364 656 aaKnown RBP8.08□□□□□ -1.12
CDC7YDL017W BMH2P34730 273 aaKnown RBP8.08□□□□□ -1.12
CDC7YDL017W MYO3P36006 1272 aa8.08□□□□□ -1.12
CDC7YDL017W RPN10P38886 268 aaKnown RBP8.08□□□□□ -1.12
CDC7YDL017W YCK3P39962 524 aa8.08□□□□□ -1.12
CDC7YDL017W SGD1Q06132 899 aa8.08□□□□□ -1.12
CDC7YDL017W HCA4P20448 770 aaKnown RBP8.08□□□□□ -1.12
CDC7YDL017W ANP1P32629 500 aa8.08□□□□□ -1.12
CDC7YDL017W YHL050CP38721 697 aa8.08□□□□□ -1.12
CDC7YDL017W YER130CP39959 443 aa8.08□□□□□ -1.12
CDC7YDL017W JJJ2P46997 583 aa8.08□□□□□ -1.12
CDC7YDL017W TOS4Q06266 489 aa8.08□□□□□ -1.12
CDC7YDL017W WRS1Q12109 432 aaKnown RBP8.08□□□□□ -1.12
CDC7YDL017W DCS2Q12123 353 aa8.08□□□□□ -1.12
CDC7YDL017W FAS2P19097 1887 aaKnown RBP8.07□□□□□ -1.12
CDC7YDL017W MDL2P33311 773 aa8.07□□□□□ -1.12
CDC7YDL017W SET4P42948 560 aa8.07□□□□□ -1.12
CDC7YDL017W FAR11P53917 953 aa8.07□□□□□ -1.12
CDC7YDL017W MRD1Q06106 887 aaKnown RBP8.07□□□□□ -1.12
CDC7YDL017W CDC6P09119 513 aa8.06□□□□□ -1.12
CDC7YDL017W RET1P22276 1149 aaKnown RBP8.06□□□□□ -1.12
CDC7YDL017W YKT6P36015 200 aaKnown RBP8.06□□□□□ -1.12
CDC7YDL017W UGA2P38067 497 aa8.06□□□□□ -1.12
CDC7YDL017W HXK1P04806 485 aaKnown RBP8.05□□□□□ -1.12
CDC7YDL017W MCM4P30665 933 aaKnown RBP8.05□□□□□ -1.12
CDC7YDL017W ERT1P38140 529 aa8.05□□□□□ -1.12
CDC7YDL017W RRM3P38766 723 aa8.05□□□□□ -1.12
CDC7YDL017W PIP2P52960 996 aa8.05□□□□□ -1.12
CDC7YDL017W NSG2P53898 299 aa8.05□□□□□ -1.12
CDC7YDL017W FLO1P32768 1537 aa8.05□□□□□ -1.12
CDC7YDL017W VPS1P21576 704 aaKnown RBP8.04□□□□□ -1.12
CDC7YDL017W MAK31P23059 88 aa8.04□□□□□ -1.12
CDC7YDL017W SRP40P32583 406 aaPredicted RBP8.04□□□□□ -1.12
CDC7YDL017W EBP2P36049 427 aaKnown RBP8.04□□□□□ -1.12
CDC7YDL017W MAL31P38156 614 aa8.04□□□□□ -1.12
CDC7YDL017W CSM2P40465 213 aa8.04□□□□□ -1.12
CDC7YDL017W VMS1Q04311 632 aaKnown RBP8.04□□□□□ -1.12
CDC7YDL017W GET3Q12154 354 aaKnown RBP8.04□□□□□ -1.12
CDC7YDL017W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
CDC7YDL017W YOR111WQ99210 232 aa8.04□□□□□ -1.12
CDC7YDL017W ARG82P07250 355 aa8.03□□□□□ -1.12
CDC7YDL017W RGP1P16664 663 aa8.03□□□□□ -1.12
CDC7YDL017W GSY2P27472 705 aa8.03□□□□□ -1.12
CDC7YDL017W ASF1P32447 279 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms