RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP6	YBR055C	BSD2	P38356	321 aa		3.15	□□□□□ -1.91
PRP6	YBR055C	YJR115W	P47152	169 aa		3.15	□□□□□ -1.91
PRP6	YBR055C	TYW3	P53177	273 aa		3.15	□□□□□ -1.91
PRP6	YBR055C	UTP4	Q06679	776 aa	Known RBP	3.15	□□□□□ -1.91
PRP6	YBR055C	YTA6	P40328	754 aa		3.14	□□□□□ -1.91
PRP6	YBR055C	ULP1	Q02724	621 aa		3.14	□□□□□ -1.91
PRP6	YBR055C	PPM2	Q08282	695 aa		3.14	□□□□□ -1.91
PRP6	YBR055C	CCP1	P00431	361 aa		3.14	□□□□□ -1.91
PRP6	YBR055C	GCR1	P07261	785 aa		3.14	□□□□□ -1.91
PRP6	YBR055C	MSH4	P40965	878 aa	Predicted RBP	3.14	□□□□□ -1.91
PRP6	YBR055C	ADI1	Q03677	179 aa		3.14	□□□□□ -1.91
PRP6	YBR055C	THI4	P32318	326 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	GRX4	P32642	244 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	ISW1	P38144	1129 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	PIC2	P40035	300 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	YGR053C	P53234	283 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	MRL1	Q06815	381 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	RTT10	Q08924	1013 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	YLR125W	Q12138	136 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	SDH2	P21801	266 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	KAP122	P32767	1081 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	GIP1	P38229	639 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	YBR287W	P38355	427 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	FLC1	Q08967	793 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	AIR2	Q12476	344 aa	Known RBP	3.13	□□□□□ -1.91
PRP6	YBR055C	AIM46	P38885	310 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	YGR125W	P53273	1036 aa		3.13	□□□□□ -1.91
PRP6	YBR055C	UTP14	Q04500	899 aa	Known RBP	3.13	□□□□□ -1.91
PRP6	YBR055C	ERR1	P0CX10	437 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	ERR2	P0CX11	437 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	SRM1	P21827	482 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	SQT1	P35184	431 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	YBR184W	P38299	523 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	YHR020W	P38708	688 aa	Known RBP	3.12	□□□□□ -1.91
PRP6	YBR055C	RGA1	P39083	1007 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	RSP5	P39940	809 aa	Known RBP	3.12	□□□□□ -1.91
PRP6	YBR055C	CHZ1	P40019	153 aa	Predicted RBP	3.12	□□□□□ -1.91
PRP6	YBR055C	YEN1	P40028	759 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	XKS1	P42826	600 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	JJJ2	P46997	583 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	RSM26	P47141	266 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	YOR296W	Q08748	1289 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	GAL11	P19659	1081 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	CHL1	P22516	861 aa	Predicted RBP	3.12	□□□□□ -1.91
PRP6	YBR055C	RAD27	P26793	382 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	RIP-Chip
PRP6	YBR055C	SHM1	P37292	490 aa	Predicted RBP	3.12	□□□□□ -1.91
PRP6	YBR055C	NUT1	P53114	1132 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	YGL081W	P53156	320 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	CTR9	P89105	1077 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	EEB1	Q02891	456 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	OSH2	Q12451	1283 aa		3.12	□□□□□ -1.91
PRP6	YBR055C	COB	P00163	385 aa		3.11	□□□□□ -1.91
PRP6	YBR055C	RPS31	P05759	152 aa	Known RBP	3.11	□□□□□ -1.91
PRP6	YBR055C	SIS1	P25294	352 aa	Known RBP	3.11	□□□□□ -1.91
PRP6	YBR055C	SSN3	P39073	555 aa		3.11	□□□□□ -1.91
PRP6	YBR055C	TMA46	Q12000	345 aa	Known RBP	3.11	□□□□□ -1.91
PRP6	YBR055C	DUR3	P33413	735 aa		3.11	□□□□□ -1.91
PRP6	YBR055C	CRP1	P38845	465 aa	Known RBP	3.11	□□□□□ -1.91
PRP6	YBR055C	UBP12	P39538	1254 aa		3.11	□□□□□ -1.91
PRP6	YBR055C	EMG1	Q06287	252 aa	Known RBP	3.11	□□□□□ -1.91
PRP6	YBR055C	SPO75	Q07798	868 aa		3.11	□□□□□ -1.91
PRP6	YBR055C	BMT6	Q12291	365 aa		3.11	□□□□□ -1.91
PRP6	YBR055C	RPC31	P17890	251 aa		3.1	□□□□□ -1.91
PRP6	YBR055C	PYC2	P32327	1180 aa	Known RBP	3.1	□□□□□ -1.91
PRP6	YBR055C	AHP1	P38013	176 aa	Known RBP	3.1	□□□□□ -1.91
PRP6	YBR055C	SUB1	P54000	292 aa	Known RBP	3.1	□□□□□ -1.91
PRP6	YBR055C	YOL057W	Q08225	711 aa		3.1	□□□□□ -1.91
PRP6	YBR055C	HSP60	P19882	572 aa	Known RBP	3.1	□□□□□ -1.91
PRP6	YBR055C	IRE1	P32361	1115 aa		3.1	□□□□□ -1.91
PRP6	YBR055C	ABD1	P32783	436 aa	Predicted RBP	3.1	□□□□□ -1.91
PRP6	YBR055C	STE5	P32917	917 aa		3.1	□□□□□ -1.91
PRP6	YBR055C	RVS167	P39743	482 aa	Known RBP	3.1	□□□□□ -1.91
PRP6	YBR055C	KRE33	P53914	1056 aa	Known RBP	3.1	□□□□□ -1.91
PRP6	YBR055C	DNM1	P54861	757 aa		3.1	□□□□□ -1.91
PRP6	YBR055C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
PRP6	YBR055C	ESC2	Q06340	456 aa		3.1	□□□□□ -1.91
PRP6	YBR055C	CIT1	P00890	479 aa		3.09	□□□□□ -1.91
PRP6	YBR055C	RPL8B	P29453	256 aa	Known RBP	3.09	□□□□□ -1.91
PRP6	YBR055C	PEX28	P38848	579 aa		3.09	□□□□□ -1.91
PRP6	YBR055C	PEX13	P80667	386 aa		3.09	□□□□□ -1.91
PRP6	YBR055C	CUS1	Q02554	436 aa	Predicted RBP	3.09	□□□□□ -1.91
PRP6	YBR055C	MSH6	Q03834	1242 aa		3.09	□□□□□ -1.91
PRP6	YBR055C	SPO20	Q04359	397 aa		3.09	□□□□□ -1.91
PRP6	YBR055C	NOP14	Q99207	810 aa	Known RBP	3.09	□□□□□ -1.91
PRP6	YBR055C	ADR1	P07248	1323 aa		3.09	□□□□□ -1.91
PRP6	YBR055C	ARE1	P25628	610 aa		3.09	□□□□□ -1.92
PRP6	YBR055C	UGA3	P26370	528 aa		3.09	□□□□□ -1.92
PRP6	YBR055C	GRX7	P38068	203 aa		3.09	□□□□□ -1.92
PRP6	YBR055C	MSN5	P52918	1224 aa		3.09	□□□□□ -1.92
PRP6	YBR055C	HED1	Q03937	162 aa		3.09	□□□□□ -1.92
PRP6	YBR055C	PMT7	Q06644	662 aa		3.09	□□□□□ -1.92
PRP6	YBR055C	TRP2	P00899	507 aa	Known RBP	3.08	□□□□□ -1.92
PRP6	YBR055C	CAN1	P04817	590 aa		3.08	□□□□□ -1.92
PRP6	YBR055C	PDC6	P26263	563 aa	Known RBP	3.08	□□□□□ -1.92
PRP6	YBR055C	SWE1	P32944	819 aa		3.08	□□□□□ -1.92
PRP6	YBR055C	MRP8	P35719	219 aa		3.08	□□□□□ -1.92
PRP6	YBR055C	VBA5	P36172	582 aa		3.08	□□□□□ -1.92
PRP6	YBR055C	GGA2	P38817	585 aa	Known RBP	3.08	□□□□□ -1.92
PRP6	YBR055C	KRI1	P42846	591 aa	Known RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms