RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	FLO11	P08640	1367 aa		12.11	□□□□□ -0.47
GDH3	YAL062W	NPA3	P47122	385 aa		12.1	□□□□□ -0.47
GDH3	YAL062W	FBP26	P32604	452 aa		12.09	□□□□□ -0.47
GDH3	YAL062W	VID28	P40547	921 aa		12.09	□□□□□ -0.47
GDH3	YAL062W	ARP5	P53946	755 aa		12.09	□□□□□ -0.47
GDH3	YAL062W	UFD2	P54860	961 aa		12.09	□□□□□ -0.47
GDH3	YAL062W	YPL260W	Q08977	551 aa		12.09	□□□□□ -0.47
GDH3	YAL062W	RPL19A	P0CX82	189 aa	Known RBP	12.08	□□□□□ -0.48
GDH3	YAL062W	RPL19B	P0CX83	189 aa	Predicted RBP	12.08	□□□□□ -0.48
GDH3	YAL062W	MRD1	Q06106	887 aa	Known RBP	12.08	□□□□□ -0.48
GDH3	YAL062W	MATALPHA2	P0CY08	210 aa		12.07	□□□□□ -0.48
GDH3	YAL062W	HMLALPHA2	P0CY09	210 aa		12.07	□□□□□ -0.48
GDH3	YAL062W	GLC3	P32775	704 aa		12.07	□□□□□ -0.48
GDH3	YAL062W	YHL050C	P38721	697 aa		12.07	□□□□□ -0.48
GDH3	YAL062W	EST2	Q06163	884 aa		12.07	□□□□□ -0.48
GDH3	YAL062W	PSK2	Q08217	1101 aa		12.07	□□□□□ -0.48
GDH3	YAL062W	MYO3	P36006	1272 aa		12.06	□□□□□ -0.48
GDH3	YAL062W	SIS2	P36024	562 aa		12.06	□□□□□ -0.48
GDH3	YAL062W	YKE2	P52553	114 aa		12.06	□□□□□ -0.48
GDH3	YAL062W	MTC3	P53077	123 aa		12.06	□□□□□ -0.48
GDH3	YAL062W	TRM44	Q02648	567 aa	Known RBP	12.06	□□□□□ -0.48
GDH3	YAL062W	PCL8	Q08966	492 aa		12.06	□□□□□ -0.48
GDH3	YAL062W	RAD61	Q99359	647 aa		12.06	□□□□□ -0.48
GDH3	YAL062W	FLO1	P32768	1537 aa		12.06	□□□□□ -0.48
GDH3	YAL062W	ANP1	P32629	500 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	SLI15	P38283	698 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	YHL017W	P38745	532 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	UTP7	P40055	554 aa	Known RBP	12.05	□□□□□ -0.48
GDH3	YAL062W	CTF18	P49956	741 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	SEN54	Q02825	467 aa	Predicted RBP	12.05	□□□□□ -0.48
GDH3	YAL062W	KEL3	Q08979	651 aa	Predicted RBP	12.05	□□□□□ -0.48
GDH3	YAL062W	TSR3	Q12094	313 aa	Known RBP	12.05	□□□□□ -0.48
GDH3	YAL062W	BIK1	P11709	440 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	VID27	P40157	782 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	YGR117C	P53270	476 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	AAD16	Q02895	342 aa		12.05	□□□□□ -0.48
GDH3	YAL062W	GAP1	P19145	602 aa	Predicted RBP	12.04	□□□□□ -0.48
GDH3	YAL062W	TTI1	P36097	1038 aa		12.04	□□□□□ -0.48
GDH3	YAL062W	BDH2	P39713	417 aa		12.04	□□□□□ -0.48
GDH3	YAL062W	MSH4	P40965	878 aa	Predicted RBP	12.04	□□□□□ -0.48
GDH3	YAL062W	VPS4	P52917	437 aa		12.04	□□□□□ -0.48
GDH3	YAL062W	HRQ1	Q05549	1077 aa		12.04	□□□□□ -0.48
GDH3	YAL062W	MPH3	P0CE00	602 aa		12.03	□□□□□ -0.48
GDH3	YAL062W	STV1	P37296	890 aa		12.03	□□□□□ -0.48
GDH3	YAL062W	SNF7	P39929	240 aa	Known RBP	12.03	□□□□□ -0.48
GDH3	YAL062W	DJP1	P40564	432 aa		12.03	□□□□□ -0.48
GDH3	YAL062W	HDA1	P53973	706 aa		12.03	□□□□□ -0.48
GDH3	YAL062W	TIM50	Q02776	476 aa		12.03	□□□□□ -0.48
GDH3	YAL062W	YLR407W	Q06070	228 aa		12.03	□□□□□ -0.48
GDH3	YAL062W	FET4	P40988	552 aa		12.02	□□□□□ -0.49
GDH3	YAL062W	PTK2	P47116	818 aa	Known RBP	12.02	□□□□□ -0.49
GDH3	YAL062W	TFC6	Q06339	672 aa		12.02	□□□□□ -0.49
GDH3	YAL062W	ELG1	Q12050	791 aa		12.02	□□□□□ -0.49
GDH3	YAL062W	YPL150W	Q12152	901 aa		12.02	□□□□□ -0.49
GDH3	YAL062W	RTG2	P32608	588 aa	Known RBP	12.01	□□□□□ -0.49
GDH3	YAL062W	UBP10	P53874	792 aa	Predicted RBP	12.01	□□□□□ -0.49
GDH3	YAL062W	HPR1	P17629	752 aa	Known RBP	12	□□□□□ -0.49
GDH3	YAL062W	MAK31	P23059	88 aa		12	□□□□□ -0.49
GDH3	YAL062W	PRE8	P23639	250 aa		12	□□□□□ -0.49
GDH3	YAL062W	RIT1	P23796	513 aa		12	□□□□□ -0.49
GDH3	YAL062W	MSP1	P28737	362 aa		12	□□□□□ -0.49
GDH3	YAL062W	ALG2	P43636	503 aa		12	□□□□□ -0.49
GDH3	YAL062W	HST1	P53685	503 aa		12	□□□□□ -0.49
GDH3	YAL062W	YLR278C	Q05854	1341 aa		11.99	□□□□□ -0.49
GDH3	YAL062W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.99	□□□□□ -0.49	not detected
GDH3	YAL062W	PRX1	P34227	261 aa	Known RBP	11.99	□□□□□ -0.49
GDH3	YAL062W	AKR1	P39010	764 aa		11.99	□□□□□ -0.49
GDH3	YAL062W	HYR1	P40581	163 aa	Known RBP	11.99	□□□□□ -0.49
GDH3	YAL062W	CPA2	P03965	1118 aa	Known RBP	11.98	□□□□□ -0.49
GDH3	YAL062W	KIN1	P13185	1064 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	SRM1	P21827	482 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	ADP1	P25371	1049 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	MAL31	P38156	614 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	VPS8	P39702	1274 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	BUD6	P41697	788 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	EPL1	P43572	832 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	ENT3	P47160	408 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	PEX14	P53112	341 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	HAP5	Q02516	242 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	MYO5	Q04439	1219 aa	Known RBP	11.98	□□□□□ -0.49
GDH3	YAL062W	ISW2	Q08773	1120 aa		11.98	□□□□□ -0.49
GDH3	YAL062W	PRO3	P32263	286 aa	Known RBP	11.97	□□□□□ -0.49
GDH3	YAL062W	BMH2	P34730	273 aa	Known RBP	11.97	□□□□□ -0.49
GDH3	YAL062W	YBL028C	P38202	106 aa		11.97	□□□□□ -0.49
GDH3	YAL062W	RPT6	Q01939	405 aa	Known RBP	11.97	□□□□□ -0.49
GDH3	YAL062W	SKG3	Q06315	1026 aa		11.97	□□□□□ -0.49
GDH3	YAL062W	AIM7	Q12156	149 aa		11.97	□□□□□ -0.49
GDH3	YAL062W	PMA1	P05030	918 aa	Known RBP	11.96	□□□□□ -0.49
GDH3	YAL062W	CBP1	P07252	654 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	CBP3	P21560	335 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	RAD53	P22216	821 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	ROX1	P25042	368 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	PES4	P39684	611 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	EMP47	P43555	445 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	YGL081W	P53156	320 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	YPR148C	Q06523	435 aa		11.96	□□□□□ -0.49
GDH3	YAL062W	YDL124W	Q07551	312 aa	Known RBP	11.96	□□□□□ -0.49
GDH3	YAL062W	THS1	P04801	734 aa	Known RBP	11.95	□□□□□ -0.5
GDH3	YAL062W	NIT1	P40447	199 aa		11.95	□□□□□ -0.5
GDH3	YAL062W	COG8	Q04632	607 aa		11.95	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms