RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
PAX6-273ENST00000640610 TULP4Q9NRJ4 1543 aa12.25□□□□□ -0.45
PAX6-273ENST00000640610 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
PAX6-273ENST00000640610 HSPA2P54652 639 aa12.25□□□□□ -0.45
PAX6-273ENST00000640610 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
PAX6-273ENST00000640610 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
PAX6-273ENST00000640610 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
PAX6-273ENST00000640610 MTHFSP49914 203 aa12.24□□□□□ -0.45
PAX6-273ENST00000640610 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
PAX6-273ENST00000640610 DIP2AQ14689 1571 aa12.24□□□□□ -0.45
PAX6-273ENST00000640610 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
PAX6-273ENST00000640610 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
PAX6-273ENST00000640610 TBX22Q9Y458 520 aa12.24□□□□□ -0.45
PAX6-273ENST00000640610 KNDC1Q76NI1 1749 aa12.23□□□□□ -0.45
PAX6-273ENST00000640610 FRAT2O75474 233 aaPredicted RBP12.23□□□□□ -0.45
PAX6-273ENST00000640610 C8orf34Q49A92 452 aa12.23□□□□□ -0.45
PAX6-273ENST00000640610 ABCC11Q96J66 1382 aa12.23□□□□□ -0.45
PAX6-273ENST00000640610 E9PSI1 815 aa12.23□□□□□ -0.45
PAX6-273ENST00000640610 PTPRUQ92729 1446 aa12.22□□□□□ -0.45
PAX6-273ENST00000640610 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
PAX6-273ENST00000640610 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
PAX6-273ENST00000640610 DLC1Q96QB1 1528 aa12.22□□□□□ -0.45
PAX6-273ENST00000640610 EVC2Q86UK5 1308 aa12.21□□□□□ -0.45
PAX6-273ENST00000640610 WAPLQ7Z5K2 1190 aa12.21□□□□□ -0.45
PAX6-273ENST00000640610 VIRMAQ69YN4 1812 aaKnown RBP12.21□□□□□ -0.45
PAX6-273ENST00000640610 TCP11L2Q8N4U5 519 aa12.21□□□□□ -0.46
PAX6-273ENST00000640610 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.46
PAX6-273ENST00000640610 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.46
PAX6-273ENST00000640610 POGKQ9P215 609 aa12.2□□□□□ -0.46
PAX6-273ENST00000640610 CPS1P31327 1500 aa12.2□□□□□ -0.46
PAX6-273ENST00000640610 STRCQ7RTU9 1775 aa12.2□□□□□ -0.46
PAX6-273ENST00000640610 TECPR2O15040 1411 aa12.2□□□□□ -0.46
PAX6-273ENST00000640610 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
PAX6-273ENST00000640610 MINK1Q8N4C8 1332 aaPredicted RBP12.2□□□□□ -0.46
PAX6-273ENST00000640610 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
PAX6-273ENST00000640610 AMOTL2Q9Y2J4 779 aa12.19□□□□□ -0.46
PAX6-273ENST00000640610 PANK1Q8TE04 598 aa12.19□□□□□ -0.46
PAX6-273ENST00000640610 RUNDC1Q96C34 613 aa12.19□□□□□ -0.46
PAX6-273ENST00000640610 TNNQ9UQP3 1299 aa12.19□□□□□ -0.46
PAX6-273ENST00000640610 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
PAX6-273ENST00000640610 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
PAX6-273ENST00000640610 XRN1Q8IZH2 1706 aaKnown RBP12.19□□□□□ -0.46
PAX6-273ENST00000640610 L1TD1Q5T7N2 865 aaKnown RBP12.18□□□□□ -0.46
PAX6-273ENST00000640610 GGNBP2Q9H3C7 697 aa12.18□□□□□ -0.46
PAX6-273ENST00000640610 A0A1W2PP64 1363 aa12.18□□□□□ -0.46
PAX6-273ENST00000640610 RGS3P49796 1198 aa12.18□□□□□ -0.46
PAX6-273ENST00000640610 GLIPR1L2Q4G1C9 344 aa12.18□□□□□ -0.46
PAX6-273ENST00000640610 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
PAX6-273ENST00000640610 IQSEC2Q5JU85 1478 aa12.18□□□□□ -0.46
PAX6-273ENST00000640610 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
PAX6-273ENST00000640610 PIK3R4Q99570 1358 aa12.17□□□□□ -0.46
PAX6-273ENST00000640610 IGHDP01880 384 aa12.17□□□□□ -0.46
PAX6-273ENST00000640610 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
PAX6-273ENST00000640610 COG6Q9Y2V7 657 aa12.17□□□□□ -0.46
PAX6-273ENST00000640610 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
PAX6-273ENST00000640610 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
PAX6-273ENST00000640610 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.16□□□□□ -0.46
PAX6-273ENST00000640610 USP32Q8NFA0 1604 aa12.16□□□□□ -0.46
PAX6-273ENST00000640610 KCNA6P17658 529 aa12.16□□□□□ -0.46
PAX6-273ENST00000640610 CANXP27824 592 aaKnown RBP12.15□□□□□ -0.47
PAX6-273ENST00000640610 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
PAX6-273ENST00000640610 PTCH1Q13635 1447 aa12.14□□□□□ -0.47
PAX6-273ENST00000640610 RLBP1P12271 317 aa12.14□□□□□ -0.47
PAX6-273ENST00000640610 FBLN1P23142 703 aa12.14□□□□□ -0.47
PAX6-273ENST00000640610 BECN1Q14457 450 aa12.14□□□□□ -0.47
PAX6-273ENST00000640610 RARSP54136 660 aaKnown RBP12.13□□□□□ -0.47
PAX6-273ENST00000640610 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
PAX6-273ENST00000640610 STRCP1A6NGW2 1772 aa12.13□□□□□ -0.47
PAX6-273ENST00000640610 CD163L1Q9NR16 1453 aa12.13□□□□□ -0.47
PAX6-273ENST00000640610 FYB1O15117 783 aa12.12□□□□□ -0.47
PAX6-273ENST00000640610 NGEFQ8N5V2 710 aa12.12□□□□□ -0.47
PAX6-273ENST00000640610 PUS7Q96PZ0 661 aaKnown RBP12.12□□□□□ -0.47
PAX6-273ENST00000640610 TSR2Q969E8 191 aaKnown RBP12.12□□□□□ -0.47
PAX6-273ENST00000640610 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
PAX6-273ENST00000640610 CDK19Q9BWU1 502 aa12.12□□□□□ -0.47
PAX6-273ENST00000640610 NWD1Q149M9 1564 aa12.11□□□□□ -0.47
PAX6-273ENST00000640610 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
PAX6-273ENST00000640610 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
PAX6-273ENST00000640610 RRAGDQ9NQL2 400 aaPredicted RBP12.11□□□□□ -0.47
PAX6-273ENST00000640610 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
PAX6-273ENST00000640610 NSD2O96028 1365 aa12.1□□□□□ -0.47
PAX6-273ENST00000640610 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
PAX6-273ENST00000640610 PDE3AQ14432 1141 aa12.1□□□□□ -0.47
PAX6-273ENST00000640610 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
PAX6-273ENST00000640610 ADGRB2O60241 1585 aa12.1□□□□□ -0.47
PAX6-273ENST00000640610 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
PAX6-273ENST00000640610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.09□□□□□ -0.47
PAX6-273ENST00000640610 NALCNQ8IZF0 1738 aa12.09□□□□□ -0.47
PAX6-273ENST00000640610 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
PAX6-273ENST00000640610 PCDHB15Q9Y5E8 787 aa12.08□□□□□ -0.48
PAX6-273ENST00000640610 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
PAX6-273ENST00000640610 USP19O94966 1318 aa12.08□□□□□ -0.48
PAX6-273ENST00000640610 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
PAX6-273ENST00000640610 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
PAX6-273ENST00000640610 CCDC27Q2M243 656 aa12.08□□□□□ -0.48
PAX6-273ENST00000640610 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
PAX6-273ENST00000640610 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
PAX6-273ENST00000640610 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
PAX6-273ENST00000640610 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
PAX6-273ENST00000640610 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms