RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 FAM161AQ3B820 660 aa12.1□□□□□ -0.47
NECAP1-225ENST00000640209 TERF2IPQ9NYB0 399 aa12.1□□□□□ -0.47
NECAP1-225ENST00000640209 LAS1LQ9Y4W2 734 aaKnown RBP12.1□□□□□ -0.47
NECAP1-225ENST00000640209 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
NECAP1-225ENST00000640209 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
NECAP1-225ENST00000640209 HOMEZQ8IX15 550 aa12.09□□□□□ -0.47
NECAP1-225ENST00000640209 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
NECAP1-225ENST00000640209 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
NECAP1-225ENST00000640209 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
NECAP1-225ENST00000640209 PCDHB15Q9Y5E8 787 aa12.08□□□□□ -0.48
NECAP1-225ENST00000640209 RIMS2Q9UQ26 1411 aa12.08□□□□□ -0.48
NECAP1-225ENST00000640209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.48
NECAP1-225ENST00000640209 ANKRD26Q9UPS8 1709 aa12.07□□□□□ -0.48
NECAP1-225ENST00000640209 AGLP35573 1532 aa12.07□□□□□ -0.48
NECAP1-225ENST00000640209 DEKP35659 375 aaKnown RBP12.07□□□□□ -0.48
NECAP1-225ENST00000640209 MYH16Q9H6N6 1097 aa12.06□□□□□ -0.48
NECAP1-225ENST00000640209 SPATA31D1Q6ZQQ2 1576 aa12.06□□□□□ -0.48
NECAP1-225ENST00000640209 REREQ9P2R6 1566 aa12.06□□□□□ -0.48
NECAP1-225ENST00000640209 MED14O60244 1454 aa12.06□□□□□ -0.48
NECAP1-225ENST00000640209 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
NECAP1-225ENST00000640209 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
NECAP1-225ENST00000640209 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
NECAP1-225ENST00000640209 PNPLA6Q8IY17 1366 aa12.05□□□□□ -0.48
NECAP1-225ENST00000640209 METP08581 1390 aa12.04□□□□□ -0.48
NECAP1-225ENST00000640209 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
NECAP1-225ENST00000640209 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
NECAP1-225ENST00000640209 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
NECAP1-225ENST00000640209 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
NECAP1-225ENST00000640209 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
NECAP1-225ENST00000640209 KIF20BQ96Q89 1820 aa12.04□□□□□ -0.48
NECAP1-225ENST00000640209 RIPK4P57078 832 aa12.03□□□□□ -0.48
NECAP1-225ENST00000640209 POLKQ9UBT6 870 aa12.03□□□□□ -0.48
NECAP1-225ENST00000640209 DLC1Q96QB1 1528 aa12.03□□□□□ -0.48
NECAP1-225ENST00000640209 PPM1GO15355 546 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-225ENST00000640209 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
NECAP1-225ENST00000640209 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
NECAP1-225ENST00000640209 SEC24BO95487 1268 aa12.02□□□□□ -0.48
NECAP1-225ENST00000640209 SSH1Q8WYL5 1049 aa12.02□□□□□ -0.48
NECAP1-225ENST00000640209 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
NECAP1-225ENST00000640209 USP19O94966 1318 aa12.02□□□□□ -0.49
NECAP1-225ENST00000640209 NME9Q86XW9 330 aa12.01□□□□□ -0.49
NECAP1-225ENST00000640209 MVPQ14764 893 aaKnown RBP12.01□□□□□ -0.49
NECAP1-225ENST00000640209 ZKSCAN2Q63HK3 967 aa12.01□□□□□ -0.49
NECAP1-225ENST00000640209 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
NECAP1-225ENST00000640209 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
NECAP1-225ENST00000640209 ZMYM3Q14202 1370 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 LRRC7Q96NW7 1537 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 BCL11AQ9H165 835 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
NECAP1-225ENST00000640209 TRIM27P14373 513 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 PRKAR2BP31323 418 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 DZIP1LQ8IYY4 767 aaKnown RBP12□□□□□ -0.49
NECAP1-225ENST00000640209 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 PHACTR3Q96KR7 559 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 ATP7BP35670 1465 aa12□□□□□ -0.49
NECAP1-225ENST00000640209 NEFMP07197 916 aa11.99□□□□□ -0.49
NECAP1-225ENST00000640209 HMOX1P09601 288 aa11.99□□□□□ -0.49
NECAP1-225ENST00000640209 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
NECAP1-225ENST00000640209 CPSF1Q10570 1443 aaKnown RBP11.99□□□□□ -0.49
NECAP1-225ENST00000640209 PPIP5K1Q6PFW1 1433 aa11.99□□□□□ -0.49
NECAP1-225ENST00000640209 RTL5Q5HYW3 569 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-225ENST00000640209 THUMPD2Q9BTF0 503 aaKnown RBP11.99□□□□□ -0.49
NECAP1-225ENST00000640209 NOB1Q9ULX3 412 aaKnown RBP11.99□□□□□ -0.49
NECAP1-225ENST00000640209 IL16Q14005 1332 aa11.98□□□□□ -0.49
NECAP1-225ENST00000640209 CDC42BPGQ6DT37 1551 aa11.98□□□□□ -0.49
NECAP1-225ENST00000640209 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
NECAP1-225ENST00000640209 CPS1P31327 1500 aa11.98□□□□□ -0.49
NECAP1-225ENST00000640209 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
NECAP1-225ENST00000640209 FCHSD2O94868 740 aa11.98□□□□□ -0.49
NECAP1-225ENST00000640209 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
NECAP1-225ENST00000640209 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
NECAP1-225ENST00000640209 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
NECAP1-225ENST00000640209 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
NECAP1-225ENST00000640209 KIF13AQ9H1H9 1805 aa11.96□□□□□ -0.49
NECAP1-225ENST00000640209 AAMPQ13685 434 aa11.96□□□□□ -0.49
NECAP1-225ENST00000640209 ATF7IPQ6VMQ6 1270 aa11.96□□□□□ -0.49
NECAP1-225ENST00000640209 PRR36Q9H6K5 1346 aa11.96□□□□□ -0.49
NECAP1-225ENST00000640209 IL13P35225 146 aa11.96□□□□□ -0.5
NECAP1-225ENST00000640209 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.5
NECAP1-225ENST00000640209 ITPRIPQ8IWB1 547 aa11.96□□□□□ -0.5
NECAP1-225ENST00000640209 TMEM57Q8N5G2 664 aa11.96□□□□□ -0.5
NECAP1-225ENST00000640209 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.5
NECAP1-225ENST00000640209 EDC4Q6P2E9 1401 aaKnown RBP11.96□□□□□ -0.5
NECAP1-225ENST00000640209 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
NECAP1-225ENST00000640209 TNRQ92752 1358 aa11.94□□□□□ -0.5
NECAP1-225ENST00000640209 ROBO2Q9HCK4 1378 aa11.94□□□□□ -0.5
NECAP1-225ENST00000640209 NFE2L2Q16236 605 aa11.94□□□□□ -0.5
NECAP1-225ENST00000640209 ESF1Q9H501 851 aaKnown RBP11.94□□□□□ -0.5
NECAP1-225ENST00000640209 TSPYL6Q8N831 410 aa11.93□□□□□ -0.5
NECAP1-225ENST00000640209 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
NECAP1-225ENST00000640209 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
NECAP1-225ENST00000640209 TECPR2O15040 1411 aa11.92□□□□□ -0.5
NECAP1-225ENST00000640209 NFKBIBQ15653 356 aa11.92□□□□□ -0.5
NECAP1-225ENST00000640209 TMEM2Q9UHN6 1383 aa11.92□□□□□ -0.5
NECAP1-225ENST00000640209 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
NECAP1-225ENST00000640209 ZBTB40Q9NUA8 1239 aa11.92□□□□□ -0.5
NECAP1-225ENST00000640209 DDX19BQ9UMR2 479 aa11.92□□□□□ -0.5
NECAP1-225ENST00000640209 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms