RNA–Protein interactions for RNA: ENST00000639370.1

KCNMA1-258, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-258ENST00000639370 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.36
KCNMA1-258ENST00000639370 PUS7Q96PZ0 661 aaKnown RBP12.77□□□□□ -0.36
KCNMA1-258ENST00000639370 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
KCNMA1-258ENST00000639370 KIF1BO60333 1816 aa12.77□□□□□ -0.37
KCNMA1-258ENST00000639370 NUCB1Q02818 461 aa12.77□□□□□ -0.37
KCNMA1-258ENST00000639370 ANP32BQ92688 251 aaKnown RBP12.76□□□□□ -0.37
KCNMA1-258ENST00000639370 IL16Q14005 1332 aa12.76□□□□□ -0.37
KCNMA1-258ENST00000639370 ELL2O00472 640 aaPredicted RBP12.76□□□□□ -0.37
KCNMA1-258ENST00000639370 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
KCNMA1-258ENST00000639370 UBE2Q2Q8WVN8 375 aa12.75□□□□□ -0.37
KCNMA1-258ENST00000639370 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
KCNMA1-258ENST00000639370 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
KCNMA1-258ENST00000639370 ABCC11Q96J66 1382 aa12.75□□□□□ -0.37
KCNMA1-258ENST00000639370 SKOR2Q2VWA4 1001 aaPredicted RBP12.75□□□□□ -0.37
KCNMA1-258ENST00000639370 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
KCNMA1-258ENST00000639370 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 PTMSP20962 102 aa12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 ALDH1L2Q3SY69 923 aa12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 SNX21Q969T3 373 aa12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 ISY1Q9ULR0 285 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 FYB1O15117 783 aa12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 CLCN1P35523 988 aa12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 ARAP3Q8WWN8 1544 aa12.74□□□□□ -0.37
KCNMA1-258ENST00000639370 VWDEQ8N2E2 1590 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 EFCAB6Q5THR3 1501 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 GLIPR1L2Q4G1C9 344 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 NRXN1Q9ULB1 1477 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 A0A1W2PP64 1363 aa12.73□□□□□ -0.37
KCNMA1-258ENST00000639370 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-258ENST00000639370 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
KCNMA1-258ENST00000639370 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
KCNMA1-258ENST00000639370 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
KCNMA1-258ENST00000639370 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-258ENST00000639370 NPATQ14207 1427 aa12.72□□□□□ -0.37
KCNMA1-258ENST00000639370 ESPNB1AK53 854 aa12.71□□□□□ -0.37
KCNMA1-258ENST00000639370 FCHSD2O94868 740 aa12.71□□□□□ -0.37
KCNMA1-258ENST00000639370 HMOX1P09601 288 aa12.71□□□□□ -0.37
KCNMA1-258ENST00000639370 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-258ENST00000639370 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
KCNMA1-258ENST00000639370 K7ELQ4 463 aaPredicted RBP12.71□□□□□ -0.38
KCNMA1-258ENST00000639370 CD109Q6YHK3 1445 aa12.7□□□□□ -0.38
KCNMA1-258ENST00000639370 ZNF428Q96B54 188 aa12.7□□□□□ -0.38
KCNMA1-258ENST00000639370 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-258ENST00000639370 THUMPD2Q9BTF0 503 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-258ENST00000639370 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
KCNMA1-258ENST00000639370 DDX49Q9Y6V7 483 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-258ENST00000639370 TBC1D9Q6ZT07 1266 aa12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 RAB3GAP1Q15042 981 aa12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 IDI1Q13907 227 aa12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 ADGRB3O60242 1522 aa12.69□□□□□ -0.38
KCNMA1-258ENST00000639370 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-258ENST00000639370 CDC45O75419 566 aa12.68□□□□□ -0.38
KCNMA1-258ENST00000639370 GNAI1P63096 354 aa12.68□□□□□ -0.38
KCNMA1-258ENST00000639370 FBLN1P23142 703 aa12.68□□□□□ -0.38
KCNMA1-258ENST00000639370 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-258ENST00000639370 CDK19Q9BWU1 502 aa12.68□□□□□ -0.38
KCNMA1-258ENST00000639370 MROH2AA6NES4 1674 aa12.67□□□□□ -0.38
KCNMA1-258ENST00000639370 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-258ENST00000639370 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
KCNMA1-258ENST00000639370 SSFA2P28290 1259 aa12.67□□□□□ -0.38
KCNMA1-258ENST00000639370 NFE2L2Q16236 605 aa12.67□□□□□ -0.38
KCNMA1-258ENST00000639370 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
KCNMA1-258ENST00000639370 VAMP4O75379 141 aa12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 ADGRB1O14514 1584 aa12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 APBB1O00213 710 aa12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 TWISTNBQ3B726 338 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 API5Q9BZZ5 524 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 CASC1Q6TDU7 716 aa12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
KCNMA1-258ENST00000639370 NASPP49321 788 aaPredicted RBP12.65□□□□□ -0.38
KCNMA1-258ENST00000639370 ARHGAP45Q92619 1136 aa12.65□□□□□ -0.38
KCNMA1-258ENST00000639370 RAPGEF3O95398 923 aa12.65□□□□□ -0.38
KCNMA1-258ENST00000639370 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-258ENST00000639370 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
KCNMA1-258ENST00000639370 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
KCNMA1-258ENST00000639370 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
KCNMA1-258ENST00000639370 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
KCNMA1-258ENST00000639370 TULP4Q9NRJ4 1543 aa12.64□□□□□ -0.39
KCNMA1-258ENST00000639370 DDIT3P35638 169 aa12.64□□□□□ -0.39
KCNMA1-258ENST00000639370 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
KCNMA1-258ENST00000639370 MCTP1Q6DN14 999 aa12.64□□□□□ -0.39
KCNMA1-258ENST00000639370 MSNP26038 577 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-258ENST00000639370 RABEP1Q15276 862 aa12.63□□□□□ -0.39
KCNMA1-258ENST00000639370 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
KCNMA1-258ENST00000639370 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms