RNA–Protein interactions for RNA: ENST00000638283.1

KCNMA1-231, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-231	ENST00000638283	TTC21B	Q7Z4L5	1316 aa		12.1	□□□□□ -0.47
KCNMA1-231	ENST00000638283	ITSN1	Q15811	1721 aa		12.1	□□□□□ -0.47
KCNMA1-231	ENST00000638283	AKAP12	Q02952	1782 aa		12.09	□□□□□ -0.47
KCNMA1-231	ENST00000638283	SSH2	Q76I76	1423 aa		12.09	□□□□□ -0.47
KCNMA1-231	ENST00000638283	SLAIN2	Q9P270	581 aa		12.09	□□□□□ -0.47
KCNMA1-231	ENST00000638283	MON2	Q7Z3U7	1717 aa		12.09	□□□□□ -0.47
KCNMA1-231	ENST00000638283	MORC1	Q86VD1	984 aa		12.09	□□□□□ -0.47
KCNMA1-231	ENST00000638283	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.09	□□□□□ -0.47
KCNMA1-231	ENST00000638283	PPP2R1A	P30153	589 aa		12.08	□□□□□ -0.48
KCNMA1-231	ENST00000638283	NUTM2G	Q5VZR2	741 aa		12.08	□□□□□ -0.48
KCNMA1-231	ENST00000638283	CCER2	I3L3R5	266 aa		12.08	□□□□□ -0.48
KCNMA1-231	ENST00000638283	BRINP3	Q76B58	766 aa		12.08	□□□□□ -0.48
KCNMA1-231	ENST00000638283	NRK	Q7Z2Y5	1582 aa		12.08	□□□□□ -0.48
KCNMA1-231	ENST00000638283	PAK3	O75914	559 aa	Predicted RBP	12.07	□□□□□ -0.48
KCNMA1-231	ENST00000638283	PSME1	Q06323	249 aa		12.07	□□□□□ -0.48
KCNMA1-231	ENST00000638283	MRS2	Q9HD23	443 aa		12.07	□□□□□ -0.48
KCNMA1-231	ENST00000638283	NSD2	O96028	1365 aa		12.05	□□□□□ -0.48
KCNMA1-231	ENST00000638283	PLEKHG5	O94827	1062 aa		12.05	□□□□□ -0.48
KCNMA1-231	ENST00000638283	SOX12	O15370	315 aa		12.04	□□□□□ -0.48
KCNMA1-231	ENST00000638283	KRT28	Q7Z3Y7	464 aa		12.04	□□□□□ -0.48
KCNMA1-231	ENST00000638283	NLRP13	Q86W25	1043 aa		12.04	□□□□□ -0.48
KCNMA1-231	ENST00000638283	YTHDC1	Q96MU7	727 aa	Known RBP	12.04	□□□□□ -0.48
KCNMA1-231	ENST00000638283	ABTB2	Q8N961	1025 aa		12.04	□□□□□ -0.48
KCNMA1-231	ENST00000638283	KIF20B	Q96Q89	1820 aa		12.03	□□□□□ -0.48
KCNMA1-231	ENST00000638283	COG3	Q96JB2	828 aa		12.03	□□□□□ -0.48
KCNMA1-231	ENST00000638283	PIK3C2A	O00443	1686 aa		12.03	□□□□□ -0.48
KCNMA1-231	ENST00000638283	NLRP6	P59044	892 aa		12.02	□□□□□ -0.48
KCNMA1-231	ENST00000638283	TTC21A	Q8NDW8	1320 aa		12.02	□□□□□ -0.48
KCNMA1-231	ENST00000638283	OVOS2	A0A0J9YW53	1432 aa		12.02	□□□□□ -0.49
KCNMA1-231	ENST00000638283	OVOS2	Q6IE36	1432 aa		12.02	□□□□□ -0.49
KCNMA1-231	ENST00000638283	MTHFS	P49914	203 aa		12.02	□□□□□ -0.49
KCNMA1-231	ENST00000638283	LMOD2	Q6P5Q4	547 aa		12.02	□□□□□ -0.49
KCNMA1-231	ENST00000638283	FAM9B	Q8IZU0	186 aa		12.02	□□□□□ -0.49
KCNMA1-231	ENST00000638283	RRS1	Q15050	365 aa	Known RBP	12.02	□□□□□ -0.49
KCNMA1-231	ENST00000638283	BRD4	O60885	1362 aa	Predicted RBP	12.01	□□□□□ -0.49
KCNMA1-231	ENST00000638283	KIF1A	Q12756	1690 aa		12.01	□□□□□ -0.49
KCNMA1-231	ENST00000638283	EMILIN1	Q9Y6C2	1016 aa		12.01	□□□□□ -0.49
KCNMA1-231	ENST00000638283	PNISR	Q8TF01	805 aa	Known RBP	12	□□□□□ -0.49
KCNMA1-231	ENST00000638283	NPHP3	Q7Z494	1330 aa		12	□□□□□ -0.49
KCNMA1-231	ENST00000638283	PXDN	Q92626	1479 aa		12	□□□□□ -0.49
KCNMA1-231	ENST00000638283	ANKRD26	Q9UPS8	1709 aa		12	□□□□□ -0.49
KCNMA1-231	ENST00000638283	SENP3-EIF4A1	A0A087X0R7	540 aa		12	□□□□□ -0.49
KCNMA1-231	ENST00000638283	PPM1G	O15355	546 aa	Predicted RBP	12	□□□□□ -0.49
KCNMA1-231	ENST00000638283	POLK	Q9UBT6	870 aa		12	□□□□□ -0.49
KCNMA1-231	ENST00000638283	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.99	□□□□□ -0.49
KCNMA1-231	ENST00000638283	PIP4K2B	P78356	416 aa		11.99	□□□□□ -0.49
KCNMA1-231	ENST00000638283	USP31	Q70CQ4	1352 aa		11.99	□□□□□ -0.49
KCNMA1-231	ENST00000638283	MARF1	Q9Y4F3	1742 aa	Known RBP	11.98	□□□□□ -0.49
KCNMA1-231	ENST00000638283	CABLES1	Q8TDN4	633 aa		11.97	□□□□□ -0.49
KCNMA1-231	ENST00000638283	CERK	Q8TCT0	537 aa		11.97	□□□□□ -0.49
KCNMA1-231	ENST00000638283	SOS2	Q07890	1332 aa	Predicted RBP	11.97	□□□□□ -0.49
KCNMA1-231	ENST00000638283	ROBO1	Q9Y6N7	1651 aa		11.97	□□□□□ -0.49
KCNMA1-231	ENST00000638283	UBAP1L	F5GYI3	381 aa		11.96	□□□□□ -0.49
KCNMA1-231	ENST00000638283	SCAF1	Q9H7N4	1312 aa	Known RBP	11.96	□□□□□ -0.49
KCNMA1-231	ENST00000638283	SPATA31A3	Q5VYP0	1347 aa		11.96	□□□□□ -0.49
KCNMA1-231	ENST00000638283	AATK	Q6ZMQ8	1374 aa		11.95	□□□□□ -0.5
KCNMA1-231	ENST00000638283	MAP3K19	Q56UN5	1328 aa		11.95	□□□□□ -0.5
KCNMA1-231	ENST00000638283	SBNO1	A3KN83	1393 aa		11.95	□□□□□ -0.5
KCNMA1-231	ENST00000638283	TNS3	Q68CZ2	1445 aa		11.95	□□□□□ -0.5
KCNMA1-231	ENST00000638283	TOM1	O60784	492 aa		11.95	□□□□□ -0.5
KCNMA1-231	ENST00000638283	ADAMTS8	Q9UP79	889 aa		11.95	□□□□□ -0.5
KCNMA1-231	ENST00000638283	ALS2	Q96Q42	1657 aa		11.94	□□□□□ -0.5
KCNMA1-231	ENST00000638283	GC	P02774	474 aa		11.94	□□□□□ -0.5
KCNMA1-231	ENST00000638283	MAP2	P11137	1827 aa	Known RBP	11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	PRKCSH	P14314	528 aa	Predicted RBP	11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	MED1	Q15648	1581 aa	Predicted RBP	11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	HSP90AB2P	Q58FF8	381 aa		11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	PNPLA6	Q8IY17	1366 aa		11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	NHSL1	Q5SYE7	1610 aa		11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	COL3A1	P02461	1466 aa	Predicted RBP	11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	USP19	O94966	1318 aa		11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	ZBTB7C	A1YPR0	619 aa		11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	PEAK1	Q9H792	1746 aa		11.93	□□□□□ -0.5
KCNMA1-231	ENST00000638283	SMG6	Q86US8	1419 aa	Known RBP	11.92	□□□□□ -0.5
KCNMA1-231	ENST00000638283	NFAT5	O94916	1531 aa		11.92	□□□□□ -0.5
KCNMA1-231	ENST00000638283	ZC3H6	P61129	1189 aa	Known RBP	11.92	□□□□□ -0.5
KCNMA1-231	ENST00000638283	USP54	Q70EL1	1684 aa		11.92	□□□□□ -0.5
KCNMA1-231	ENST00000638283	IQSEC2	Q5JU85	1478 aa		11.91	□□□□□ -0.5
KCNMA1-231	ENST00000638283	CFAP53	Q96M91	514 aa		11.91	□□□□□ -0.5
KCNMA1-231	ENST00000638283	SHPRH	Q149N8	1683 aa		11.91	□□□□□ -0.5
KCNMA1-231	ENST00000638283	WDR43	Q15061	677 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
KCNMA1-231	ENST00000638283	SLIT3	O75094	1523 aa		11.9	□□□□□ -0.5
KCNMA1-231	ENST00000638283	CCDC146	Q8IYE0	955 aa		11.9	□□□□□ -0.5
KCNMA1-231	ENST00000638283	U2SURP	O15042	1029 aa	Known RBP	11.9	□□□□□ -0.5
KCNMA1-231	ENST00000638283	AMPH	P49418	695 aa		11.9	□□□□□ -0.5
KCNMA1-231	ENST00000638283	ARHGEF10	O15013	1369 aa		11.9	□□□□□ -0.51
KCNMA1-231	ENST00000638283	DIAPH1	O60610	1272 aa	Known RBP	11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	KCNH5	Q8NCM2	988 aa		11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	HOXC9	P31274	260 aa		11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	IL13	P35225	146 aa		11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	INSR	P06213	1382 aa		11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	EIF4A2	Q14240	407 aa	Known RBP	11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	ARHGEF25	Q86VW2	580 aa		11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	AXIN2	Q9Y2T1	843 aa		11.89	□□□□□ -0.51
KCNMA1-231	ENST00000638283	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-231	ENST00000638283	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
KCNMA1-231	ENST00000638283	CHRNA2	Q15822	529 aa		11.88	□□□□□ -0.51

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