RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PPP2R1AP30153 589 aa7.01□□□□□ -1.29
CHD2-227ENST00000637572 TEFQ10587 303 aa7.01□□□□□ -1.29
CHD2-227ENST00000637572 TBX22Q9Y458 520 aa7.01□□□□□ -1.29
CHD2-227ENST00000637572 HECW2Q9P2P5 1572 aa7.01□□□□□ -1.29
CHD2-227ENST00000637572 ADAMTS2O95450 1211 aa7.01□□□□□ -1.29
CHD2-227ENST00000637572 RAPGEF4Q8WZA2 1011 aa7.01□□□□□ -1.29
CHD2-227ENST00000637572 LTV1Q96GA3 475 aaPredicted RBP7.01□□□□□ -1.29
CHD2-227ENST00000637572 GAS2L2Q8NHY3 880 aa7.01□□□□□ -1.29
CHD2-227ENST00000637572 MTHFSP49914 203 aa7□□□□□ -1.29
CHD2-227ENST00000637572 CADPS2Q86UW7 1296 aa7□□□□□ -1.29
CHD2-227ENST00000637572 GNAI1P63096 354 aa7□□□□□ -1.29
CHD2-227ENST00000637572 PLXNC1O60486 1568 aa7□□□□□ -1.29
CHD2-227ENST00000637572 CCDC146Q8IYE0 955 aa7□□□□□ -1.29
CHD2-227ENST00000637572 ABCA9Q8IUA7 1624 aa6.99□□□□□ -1.29
CHD2-227ENST00000637572 HMGB2P26583 209 aaKnown RBP6.99□□□□□ -1.29
CHD2-227ENST00000637572 AAMPQ13685 434 aa6.99□□□□□ -1.29
CHD2-227ENST00000637572 TSPYL2Q9H2G4 693 aaPredicted RBP6.99□□□□□ -1.29
CHD2-227ENST00000637572 SMC4Q9NTJ3 1288 aa6.99□□□□□ -1.29
CHD2-227ENST00000637572 HSP90AA1P07900 732 aaKnown RBP6.99□□□□□ -1.29
CHD2-227ENST00000637572 IRX6P78412 446 aaPredicted RBP6.99□□□□□ -1.29
CHD2-227ENST00000637572 PMFBP1Q8TBY8 1022 aa6.99□□□□□ -1.29
CHD2-227ENST00000637572 RWDD1Q9H446 243 aaPredicted RBP6.99□□□□□ -1.29
CHD2-227ENST00000637572 APAF1O14727 1248 aa6.99□□□□□ -1.29
CHD2-227ENST00000637572 NPHP1O15259 732 aa6.99□□□□□ -1.29
CHD2-227ENST00000637572 HMMRO75330 724 aa6.99□□□□□ -1.29
CHD2-227ENST00000637572 ZC3H15Q8WU90 426 aaKnown RBP6.98□□□□□ -1.29
CHD2-227ENST00000637572 NSD3Q9BZ95 1437 aa6.98□□□□□ -1.29
CHD2-227ENST00000637572 RIPK4P57078 832 aa6.98□□□□□ -1.29
CHD2-227ENST00000637572 SIRT1Q96EB6 747 aa6.98□□□□□ -1.29
CHD2-227ENST00000637572 PHF8Q9UPP1 1060 aa6.98□□□□□ -1.29
CHD2-227ENST00000637572 PLEKHO1Q53GL0 409 aaPredicted RBP6.98□□□□□ -1.29
CHD2-227ENST00000637572 RYDENQ9NUL5 291 aaKnown RBP6.98□□□□□ -1.29
CHD2-227ENST00000637572 OS9Q13438 667 aaPredicted RBP6.97□□□□□ -1.29
CHD2-227ENST00000637572 NPATQ14207 1427 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 ARHGAP31Q2M1Z3 1444 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 TTC5Q8N0Z6 440 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 YEATS2Q9ULM3 1422 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 TTC21AQ8NDW8 1320 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 WAPLQ7Z5K2 1190 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 DDRGK1Q96HY6 314 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 CT47B1P0C2W7 299 aaPredicted RBP6.97□□□□□ -1.29
CHD2-227ENST00000637572 RXRBP28702 533 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 FCHSD2O94868 740 aa6.97□□□□□ -1.29
CHD2-227ENST00000637572 MSH6P52701 1360 aa6.96□□□□□ -1.29
CHD2-227ENST00000637572 APBB1O00213 710 aa6.96□□□□□ -1.29
CHD2-227ENST00000637572 BECN1Q14457 450 aa6.96□□□□□ -1.29
CHD2-227ENST00000637572 PNISRQ8TF01 805 aaKnown RBP6.96□□□□□ -1.29
CHD2-227ENST00000637572 CDC42BPAQ5VT25 1732 aa6.96□□□□□ -1.29
CHD2-227ENST00000637572 API5Q9BZZ5 524 aaKnown RBP6.96□□□□□ -1.3
CHD2-227ENST00000637572 NLRP2Q9NX02 1062 aa6.96□□□□□ -1.3
CHD2-227ENST00000637572 ANKRD36BQ8N2N9 1353 aa6.96□□□□□ -1.3
CHD2-227ENST00000637572 KIF16BQ96L93 1317 aa6.96□□□□□ -1.3
CHD2-227ENST00000637572 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.3
CHD2-227ENST00000637572 TMEM2Q9UHN6 1383 aa6.96□□□□□ -1.3
CHD2-227ENST00000637572 NLRP1Q9C000 1473 aa6.96□□□□□ -1.3
CHD2-227ENST00000637572 SENP3-EIF4A1A0A087X0R7 540 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 HSP90AB1P08238 724 aaKnown RBP6.95□□□□□ -1.3
CHD2-227ENST00000637572 PTPRTO14522 1441 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 ITPRIPQ8IWB1 547 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 TRPM2O94759 1503 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 DDX58O95786 925 aaKnown RBP6.95□□□□□ -1.3
CHD2-227ENST00000637572 TATP17735 454 aaPredicted RBP6.95□□□□□ -1.3
CHD2-227ENST00000637572 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 ADAMTS8Q9UP79 889 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 YTHDC2Q9H6S0 1430 aaKnown RBP6.95□□□□□ -1.3
CHD2-227ENST00000637572 WDR63Q8IWG1 891 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 SSUH2Q9Y2M2 353 aa6.95□□□□□ -1.3
CHD2-227ENST00000637572 RRP7AQ9Y3A4 280 aaKnown RBP6.94□□□□□ -1.3
CHD2-227ENST00000637572 GLI2P10070 1586 aa6.94□□□□□ -1.3
CHD2-227ENST00000637572 TTC21BQ7Z4L5 1316 aa6.94□□□□□ -1.3
CHD2-227ENST00000637572 TCP11L2Q8N4U5 519 aa6.94□□□□□ -1.3
CHD2-227ENST00000637572 C19orf44Q9H6X5 657 aa6.94□□□□□ -1.3
CHD2-227ENST00000637572 SPG7Q9UQ90 795 aa6.94□□□□□ -1.3
CHD2-227ENST00000637572 NEXNQ0ZGT2 675 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 RASEFQ8IZ41 740 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 NPHP3Q7Z494 1330 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 ABCC11Q96J66 1382 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 MYOM2P54296 1465 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 SBNO2Q9Y2G9 1366 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 KCNA6P17658 529 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 PRKAR2BP31323 418 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 ZNF772Q68DY9 489 aaPredicted RBP6.93□□□□□ -1.3
CHD2-227ENST00000637572 TSPYL4Q9UJ04 414 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 DDX19BQ9UMR2 479 aa6.93□□□□□ -1.3
CHD2-227ENST00000637572 TMX4Q9H1E5 349 aaPredicted RBP6.92□□□□□ -1.3
CHD2-227ENST00000637572 HMOX1P09601 288 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 PRR29P0C7W0 189 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 NUTM2GQ5VZR2 741 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 GPATCH3Q96I76 525 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 TET3O43151 1660 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 NPC1L1Q9UHC9 1359 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 AMOTQ4VCS5 1084 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 TESK2Q96S53 571 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 RSPH6AQ9H0K4 717 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 EFCAB6Q5THR3 1501 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 ERVK-7P63135 1459 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 ABCC3O15438 1527 aa6.92□□□□□ -1.3
CHD2-227ENST00000637572 RRP1P56182 461 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms