RNA–Protein interactions for RNA: ENST00000636157.1

SMARCA2-247, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 3,211 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-247ENST00000636157 SMC4Q9NTJ3 1288 aa9.15□□□□□ -0.94
SMARCA2-247ENST00000636157 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMARCA2-247ENST00000636157 CEP170Q5SW79 1584 aa9.15□□□□□ -0.95
SMARCA2-247ENST00000636157 NOLC1Q14978 699 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 CAVIN1Q6NZI2 390 aaKnown RBP9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 TRMT2AQ8IZ69 625 aaKnown RBP9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 SIRT1Q96EB6 747 aa9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 EGFL6Q8IUX8 553 aa9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 TMX1Q9H3N1 280 aa9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 SLFN5Q08AF3 891 aa9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
SMARCA2-247ENST00000636157 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 ZSCAN23Q3MJ62 389 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 TICAM2Q86XR7 235 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 PIBF1Q8WXW3 757 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 CEP83Q9Y592 693 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 NKTRP30414 1462 aaKnown RBP9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 RTEL1-TNFRSF6BF6WH68 1400 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 NCOA3Q9Y6Q9 1424 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 DDIT3P35638 169 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 CT47A1Q5JQC4 288 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 CTR9Q6PD62 1173 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 ADAMTS8Q9UP79 889 aa9.13□□□□□ -0.95
SMARCA2-247ENST00000636157 PDE3AQ14432 1141 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 COL17A1Q9UMD9 1497 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 BRPF1P55201 1214 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 ZNF526Q8TF50 670 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 CLUAP1Q96AJ1 413 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 RASSF4Q9H2L5 321 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 RAD54L2Q9Y4B4 1467 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 ANKRD30AQ9BXX3 1397 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 DHX16O60231 1041 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 MCCP23508 829 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 NOP2P46087 812 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 GPATCH11Q8N954 259 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 CTNNA3Q9UI47 895 aa9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 DDX41Q9UJV9 622 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-247ENST00000636157 RAD51AP2Q09MP3 1159 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 ICE2Q659A1 982 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 SMC5Q8IY18 1101 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 OSCARQ8IYS5 282 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 KRT222Q8N1A0 295 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 RIOK3O14730 519 aaKnown RBP9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 CCDC172P0C7W6 258 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 PKD2Q13563 968 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 CEP120Q8N960 986 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 UHRF1BP1LA0JNW5 1464 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 ADGBQ8N7X0 1667 aa9.11□□□□□ -0.95
SMARCA2-247ENST00000636157 TRHP20396 242 aaPredicted RBP9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 HNRNPH2P55795 449 aaKnown RBP9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 PLCD4Q9BRC7 762 aa9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 MORC2Q9Y6X9 1032 aaPredicted RBP9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 ADGRL2O95490 1459 aa9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
SMARCA2-247ENST00000636157 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 TOMM22Q9NS69 142 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 FOXD4L1Q9NU39 408 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 SSFA2P28290 1259 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 SATB1Q01826 763 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 CREBRFQ8IUR6 639 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 C17orf53Q8N3J3 647 aaPredicted RBP9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 MPNDQ8N594 471 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 PMFBP1Q8TBY8 1022 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 CDK13Q14004 1512 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 TRPM1Q7Z4N2 1603 aa9.09□□□□□ -0.95
SMARCA2-247ENST00000636157 GOLGA6L6A8MZA4 724 aa9.09□□□□□ -0.96
SMARCA2-247ENST00000636157 CTIFO43310 598 aaKnown RBP9.09□□□□□ -0.96
SMARCA2-247ENST00000636157 BCAR3O75815 825 aa9.09□□□□□ -0.96
SMARCA2-247ENST00000636157 BAG4O95429 457 aaKnown RBP9.09□□□□□ -0.96
SMARCA2-247ENST00000636157 LAMC1P11047 1609 aa9.08□□□□□ -0.96
SMARCA2-247ENST00000636157 WDR43Q15061 677 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMARCA2-247ENST00000636157 BRMS1Q9HCU9 246 aa9.08□□□□□ -0.96
SMARCA2-247ENST00000636157 OS9Q13438 667 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-247ENST00000636157 GPRASP1Q5JY77 1395 aa9.08□□□□□ -0.96
SMARCA2-247ENST00000636157 CAMSAP2Q08AD1 1489 aa9.08□□□□□ -0.96
SMARCA2-247ENST00000636157 GOLIM4O00461 696 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 GLI2P10070 1586 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 GUCY2CP25092 1073 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 NCBP1Q09161 790 aaKnown RBP9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 MCTP1Q6DN14 999 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 ABCC2Q92887 1545 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 SPINK5Q9NQ38 1064 aaPredicted RBP9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 SRPK2P78362 688 aaKnown RBP9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 SNX21Q969T3 373 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 SPTLC3Q9NUV7 552 aa9.07□□□□□ -0.96
SMARCA2-247ENST00000636157 NBPF20Q3BBV1 942 aa9.06□□□□□ -0.96
SMARCA2-247ENST00000636157 LRSAM1Q6UWE0 723 aa9.06□□□□□ -0.96
SMARCA2-247ENST00000636157 KIF18AQ8NI77 898 aa9.06□□□□□ -0.96
SMARCA2-247ENST00000636157 TTC12Q9H892 705 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-247ENST00000636157 PRAG1Q86YV5 1406 aa9.06□□□□□ -0.96
SMARCA2-247ENST00000636157 DISP3Q9P2K9 1392 aa9.06□□□□□ -0.96
SMARCA2-247ENST00000636157 CASQ1P31415 396 aa9.05□□□□□ -0.96
SMARCA2-247ENST00000636157 C10orf67Q8IYJ2 551 aa9.05□□□□□ -0.96
SMARCA2-247ENST00000636157 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms