RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 FAM9BQ8IZU0 186 aa11.57□□□□□ -0.56
CHD2-211ENST00000627460 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
CHD2-211ENST00000627460 ANKARQ7Z5J8 1434 aa11.57□□□□□ -0.56
CHD2-211ENST00000627460 PPP2R1AP30153 589 aa11.56□□□□□ -0.56
CHD2-211ENST00000627460 ITSN1Q15811 1721 aa11.56□□□□□ -0.56
CHD2-211ENST00000627460 EDC4Q6P2E9 1401 aaKnown RBP11.56□□□□□ -0.56
CHD2-211ENST00000627460 PPIP5K1Q6PFW1 1433 aa11.56□□□□□ -0.56
CHD2-211ENST00000627460 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
CHD2-211ENST00000627460 PTPRUQ92729 1446 aa11.56□□□□□ -0.56
CHD2-211ENST00000627460 CFAP53Q96M91 514 aa11.56□□□□□ -0.56
CHD2-211ENST00000627460 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
CHD2-211ENST00000627460 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
CHD2-211ENST00000627460 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
CHD2-211ENST00000627460 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
CHD2-211ENST00000627460 WDR43Q15061 677 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHD2-211ENST00000627460 NUDT16Q96DE0 195 aaKnown RBP11.55□□□□□ -0.56
CHD2-211ENST00000627460 CDC42BPGQ6DT37 1551 aa11.54□□□□□ -0.56
CHD2-211ENST00000627460 CPSF1Q10570 1443 aaKnown RBP11.54□□□□□ -0.56
CHD2-211ENST00000627460 KCNA6P17658 529 aa11.54□□□□□ -0.56
CHD2-211ENST00000627460 NGEFQ8N5V2 710 aa11.54□□□□□ -0.56
CHD2-211ENST00000627460 CABP1Q9NZU7 370 aa11.54□□□□□ -0.56
CHD2-211ENST00000627460 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
CHD2-211ENST00000627460 NKTRP30414 1462 aaKnown RBP11.54□□□□□ -0.56
CHD2-211ENST00000627460 ANKRD26Q9UPS8 1709 aa11.54□□□□□ -0.56
CHD2-211ENST00000627460 NWD1Q149M9 1564 aa11.54□□□□□ -0.56
CHD2-211ENST00000627460 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
CHD2-211ENST00000627460 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
CHD2-211ENST00000627460 NCOA3Q9Y6Q9 1424 aa11.52□□□□□ -0.56
CHD2-211ENST00000627460 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.52□□□□□ -0.56
CHD2-211ENST00000627460 CD163L1Q9NR16 1453 aa11.52□□□□□ -0.56
CHD2-211ENST00000627460 TOPAZ1Q8N9V7 1692 aa11.52□□□□□ -0.57
CHD2-211ENST00000627460 HAP1P54257 671 aaPredicted RBP11.51□□□□□ -0.57
CHD2-211ENST00000627460 CCDC184Q52MB2 194 aa11.51□□□□□ -0.57
CHD2-211ENST00000627460 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
CHD2-211ENST00000627460 MON2Q7Z3U7 1717 aa11.5□□□□□ -0.57
CHD2-211ENST00000627460 NUBP1P53384 320 aa11.5□□□□□ -0.57
CHD2-211ENST00000627460 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
CHD2-211ENST00000627460 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
CHD2-211ENST00000627460 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
CHD2-211ENST00000627460 AKAP12Q02952 1782 aa11.49□□□□□ -0.57
CHD2-211ENST00000627460 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
CHD2-211ENST00000627460 NUDCQ9Y266 331 aa11.49□□□□□ -0.57
CHD2-211ENST00000627460 FYB1O15117 783 aa11.48□□□□□ -0.57
CHD2-211ENST00000627460 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
CHD2-211ENST00000627460 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
CHD2-211ENST00000627460 BLMP54132 1417 aaPredicted RBP11.48□□□□□ -0.57
CHD2-211ENST00000627460 FMN2Q9NZ56 1722 aa11.48□□□□□ -0.57
CHD2-211ENST00000627460 DCCP43146 1447 aa11.47□□□□□ -0.57
CHD2-211ENST00000627460 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
CHD2-211ENST00000627460 COG3Q96JB2 828 aa11.47□□□□□ -0.57
CHD2-211ENST00000627460 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
CHD2-211ENST00000627460 USP6P35125 1406 aa11.46□□□□□ -0.57
CHD2-211ENST00000627460 AATKQ6ZMQ8 1374 aa11.46□□□□□ -0.57
CHD2-211ENST00000627460 PRR36Q9H6K5 1346 aa11.46□□□□□ -0.57
CHD2-211ENST00000627460 GSE1Q14687 1217 aa11.46□□□□□ -0.57
CHD2-211ENST00000627460 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
CHD2-211ENST00000627460 ACEP12821 1306 aa11.45□□□□□ -0.58
CHD2-211ENST00000627460 KDM4FA0A1W2PPD8 638 aa11.45□□□□□ -0.58
CHD2-211ENST00000627460 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
CHD2-211ENST00000627460 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
CHD2-211ENST00000627460 NGDNQ8NEJ9 315 aaKnown RBP11.45□□□□□ -0.58
CHD2-211ENST00000627460 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
CHD2-211ENST00000627460 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
CHD2-211ENST00000627460 NALCNQ8IZF0 1738 aa11.44□□□□□ -0.58
CHD2-211ENST00000627460 NEFLP07196 543 aa11.44□□□□□ -0.58
CHD2-211ENST00000627460 MTHFSP49914 203 aa11.44□□□□□ -0.58
CHD2-211ENST00000627460 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
CHD2-211ENST00000627460 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
CHD2-211ENST00000627460 NRKQ7Z2Y5 1582 aa11.44□□□□□ -0.58
CHD2-211ENST00000627460 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
CHD2-211ENST00000627460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.43□□□□□ -0.582e-6■■■□□ 14.9
CHD2-211ENST00000627460 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
CHD2-211ENST00000627460 C19orf44Q9H6X5 657 aa11.43□□□□□ -0.58
CHD2-211ENST00000627460 LRRC7Q96NW7 1537 aa11.43□□□□□ -0.58
CHD2-211ENST00000627460 NEFMP07197 916 aa11.42□□□□□ -0.58
CHD2-211ENST00000627460 ADAMTS8Q9UP79 889 aa11.42□□□□□ -0.58
CHD2-211ENST00000627460 SMG6Q86US8 1419 aaKnown RBP11.42□□□□□ -0.58
CHD2-211ENST00000627460 KIF1AQ12756 1690 aa11.41□□□□□ -0.58
CHD2-211ENST00000627460 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
CHD2-211ENST00000627460 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
CHD2-211ENST00000627460 USP31Q70CQ4 1352 aa11.41□□□□□ -0.58
CHD2-211ENST00000627460 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
CHD2-211ENST00000627460 CDK12Q9NYV4 1490 aaPredicted RBP11.4□□□□□ -0.58
CHD2-211ENST00000627460 ATF3P18847 181 aa11.4□□□□□ -0.58
CHD2-211ENST00000627460 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.58
CHD2-211ENST00000627460 SSH2Q76I76 1423 aa11.4□□□□□ -0.58
CHD2-211ENST00000627460 KIF24Q5T7B8 1368 aa11.4□□□□□ -0.59
CHD2-211ENST00000627460 OVOS2A0A0J9YW53 1432 aa11.39□□□□□ -0.59
CHD2-211ENST00000627460 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
CHD2-211ENST00000627460 OVOS2Q6IE36 1432 aa11.39□□□□□ -0.59
CHD2-211ENST00000627460 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
CHD2-211ENST00000627460 RUNDC1Q96C34 613 aa11.39□□□□□ -0.59
CHD2-211ENST00000627460 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
CHD2-211ENST00000627460 MSH6P52701 1360 aa11.39□□□□□ -0.59
CHD2-211ENST00000627460 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
CHD2-211ENST00000627460 NME9Q86XW9 330 aa11.38□□□□□ -0.59
CHD2-211ENST00000627460 RNF25Q96BH1 459 aaPredicted RBP11.38□□□□□ -0.59
CHD2-211ENST00000627460 USP54Q70EL1 1684 aa11.38□□□□□ -0.59
CHD2-211ENST00000627460 SHPRHQ149N8 1683 aa11.37□□□□□ -0.59
CHD2-211ENST00000627460 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms