RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 ABCA3Q99758 1704 aa12.8□□□□□ -0.36
TARDBP-222ENST00000620505 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-222ENST00000620505 VPS72Q15906 364 aa12.8□□□□□ -0.36
TARDBP-222ENST00000620505 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
TARDBP-222ENST00000620505 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
TARDBP-222ENST00000620505 GPRASP1Q5JY77 1395 aa12.8□□□□□ -0.36
TARDBP-222ENST00000620505 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
TARDBP-222ENST00000620505 CCDC125Q86Z20 511 aa12.79□□□□□ -0.36
TARDBP-222ENST00000620505 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
TARDBP-222ENST00000620505 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
TARDBP-222ENST00000620505 ABCB7O75027 752 aa12.78□□□□□ -0.36
TARDBP-222ENST00000620505 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
TARDBP-222ENST00000620505 TRPM3Q9HCF6 1732 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-222ENST00000620505 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
TARDBP-222ENST00000620505 EIF3AQ14152 1382 aaKnown RBP12.77□□□□□ -0.37
TARDBP-222ENST00000620505 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
TARDBP-222ENST00000620505 KRT27Q7Z3Y8 459 aa12.76□□□□□ -0.37
TARDBP-222ENST00000620505 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
TARDBP-222ENST00000620505 BLMP54132 1417 aaPredicted RBP12.76□□□□□ -0.37
TARDBP-222ENST00000620505 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
TARDBP-222ENST00000620505 SF3B2Q13435 895 aaKnown RBP12.75□□□□□ -0.37
TARDBP-222ENST00000620505 ALS2Q96Q42 1657 aa12.75□□□□□ -0.37
TARDBP-222ENST00000620505 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
TARDBP-222ENST00000620505 ARHGEF28Q8N1W1 1705 aaKnown RBP12.74□□□□□ -0.37
TARDBP-222ENST00000620505 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-222ENST00000620505 HRCP23327 699 aa12.74□□□□□ -0.37
TARDBP-222ENST00000620505 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
TARDBP-222ENST00000620505 CDK19Q9BWU1 502 aa12.74□□□□□ -0.37
TARDBP-222ENST00000620505 ATP7BP35670 1465 aa12.73□□□□□ -0.37
TARDBP-222ENST00000620505 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
TARDBP-222ENST00000620505 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
TARDBP-222ENST00000620505 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
TARDBP-222ENST00000620505 PRDM11Q9NQV5 511 aa12.73□□□□□ -0.37
TARDBP-222ENST00000620505 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
TARDBP-222ENST00000620505 ZC3H6P61129 1189 aaKnown RBP12.72□□□□□ -0.37
TARDBP-222ENST00000620505 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-222ENST00000620505 STRN4Q9NRL3 753 aa12.71□□□□□ -0.37
TARDBP-222ENST00000620505 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
TARDBP-222ENST00000620505 ACEP12821 1306 aa12.7□□□□□ -0.38
TARDBP-222ENST00000620505 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
TARDBP-222ENST00000620505 CRYBG1Q9Y4K1 1723 aa12.7□□□□□ -0.38
TARDBP-222ENST00000620505 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
TARDBP-222ENST00000620505 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
TARDBP-222ENST00000620505 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-222ENST00000620505 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
TARDBP-222ENST00000620505 BAG6P46379 1132 aa12.68□□□□□ -0.38
TARDBP-222ENST00000620505 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
TARDBP-222ENST00000620505 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
TARDBP-222ENST00000620505 USP35Q9P2H5 1018 aa12.68□□□□□ -0.38
TARDBP-222ENST00000620505 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
TARDBP-222ENST00000620505 PHRF1Q9P1Y6 1649 aaKnown RBP12.67□□□□□ -0.38
TARDBP-222ENST00000620505 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-222ENST00000620505 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
TARDBP-222ENST00000620505 EP400Q96L91 3159 aa12.67□□□□□ -0.38
TARDBP-222ENST00000620505 ZBTB7CA1YPR0 619 aa12.66□□□□□ -0.38
TARDBP-222ENST00000620505 EVA1CP58658 441 aa12.66□□□□□ -0.38
TARDBP-222ENST00000620505 TOPAZ1Q8N9V7 1692 aa12.66□□□□□ -0.38
TARDBP-222ENST00000620505 POLR3AO14802 1390 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-222ENST00000620505 SPATA31A1Q5TZJ5 1347 aa12.65□□□□□ -0.38
TARDBP-222ENST00000620505 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
TARDBP-222ENST00000620505 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
TARDBP-222ENST00000620505 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
TARDBP-222ENST00000620505 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
TARDBP-222ENST00000620505 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
TARDBP-222ENST00000620505 SIN3AQ96ST3 1273 aa12.64□□□□□ -0.39
TARDBP-222ENST00000620505 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
TARDBP-222ENST00000620505 TRIM37O94972 964 aa12.63□□□□□ -0.39
TARDBP-222ENST00000620505 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
TARDBP-222ENST00000620505 LARP1Q6PKG0 1096 aaKnown RBP12.63□□□□□ -0.39
TARDBP-222ENST00000620505 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
TARDBP-222ENST00000620505 NRKQ7Z2Y5 1582 aa12.62□□□□□ -0.39
TARDBP-222ENST00000620505 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
TARDBP-222ENST00000620505 CABP1Q9NZU7 370 aa12.62□□□□□ -0.39
TARDBP-222ENST00000620505 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
TARDBP-222ENST00000620505 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
TARDBP-222ENST00000620505 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
TARDBP-222ENST00000620505 NLRP13Q86W25 1043 aa12.61□□□□□ -0.39
TARDBP-222ENST00000620505 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
TARDBP-222ENST00000620505 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
TARDBP-222ENST00000620505 QRICH2Q9H0J4 1663 aa12.61□□□□□ -0.39
TARDBP-222ENST00000620505 GCP02774 474 aa12.6□□□□□ -0.39
TARDBP-222ENST00000620505 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
TARDBP-222ENST00000620505 USP19O94966 1318 aa12.6□□□□□ -0.39
TARDBP-222ENST00000620505 APBA3O96018 575 aa12.59□□□□□ -0.39
TARDBP-222ENST00000620505 NLRP6P59044 892 aa12.59□□□□□ -0.39
TARDBP-222ENST00000620505 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
TARDBP-222ENST00000620505 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
TARDBP-222ENST00000620505 BARGINQ6ZT62 677 aa12.58□□□□□ -0.4
TARDBP-222ENST00000620505 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
TARDBP-222ENST00000620505 TNS1Q9HBL0 1735 aaKnown RBP12.58□□□□□ -0.4
TARDBP-222ENST00000620505 CPDO75976 1380 aa12.57□□□□□ -0.4
TARDBP-222ENST00000620505 SOX12O15370 315 aa12.57□□□□□ -0.4
TARDBP-222ENST00000620505 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
TARDBP-222ENST00000620505 USP6P35125 1406 aa12.56□□□□□ -0.4
TARDBP-222ENST00000620505 CAMKK2Q96RR4 588 aa12.56□□□□□ -0.4
TARDBP-222ENST00000620505 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
TARDBP-222ENST00000620505 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
TARDBP-222ENST00000620505 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
TARDBP-222ENST00000620505 COL5A2P05997 1499 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-222ENST00000620505 LRP5O75197 1615 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms