RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 NPHP3Q7Z494 1330 aa9.9□□□□□ -0.82
PSMB3-212ENST00000620309 TRPM3Q9HCF6 1732 aaPredicted RBP9.9□□□□□ -0.83
PSMB3-212ENST00000620309 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
PSMB3-212ENST00000620309 SLC24A1O60721 1099 aa9.89□□□□□ -0.83
PSMB3-212ENST00000620309 ESCO1Q5FWF5 840 aa9.89□□□□□ -0.83
PSMB3-212ENST00000620309 ORAI2Q96SN7 254 aa9.89□□□□□ -0.83
PSMB3-212ENST00000620309 UTRNP46939 3433 aa9.89□□□□□ -0.83
PSMB3-212ENST00000620309 KIF7Q2M1P5 1343 aa9.88□□□□□ -0.83
PSMB3-212ENST00000620309 WASHC2AQ641Q2 1341 aa9.88□□□□□ -0.83
PSMB3-212ENST00000620309 NWD2Q9ULI1 1742 aa9.88□□□□□ -0.83
PSMB3-212ENST00000620309 CD163L1Q9NR16 1453 aa9.88□□□□□ -0.83
PSMB3-212ENST00000620309 HIRIP3Q9BW71 556 aaPredicted RBP9.88□□□□□ -0.83
PSMB3-212ENST00000620309 RGPD1P0DJD0 1748 aa9.87□□□□□ -0.83
PSMB3-212ENST00000620309 TNS1Q9HBL0 1735 aaKnown RBP9.87□□□□□ -0.83
PSMB3-212ENST00000620309 CRYBG1Q9Y4K1 1723 aa9.87□□□□□ -0.83
PSMB3-212ENST00000620309 PLCH1Q4KWH8 1693 aa9.87□□□□□ -0.83
PSMB3-212ENST00000620309 PSDA5PKW4 1024 aaPredicted RBP9.87□□□□□ -0.83
PSMB3-212ENST00000620309 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
PSMB3-212ENST00000620309 ABCA3Q99758 1704 aa9.87□□□□□ -0.83
PSMB3-212ENST00000620309 NINLQ9Y2I6 1382 aa9.87□□□□□ -0.83
PSMB3-212ENST00000620309 PIK3C2AO00443 1686 aa9.87□□□□□ -0.83
PSMB3-212ENST00000620309 ALS2Q96Q42 1657 aa9.87□□□□□ -0.83
PSMB3-212ENST00000620309 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
PSMB3-212ENST00000620309 DISP2A7MBM2 1401 aa9.86□□□□□ -0.83
PSMB3-212ENST00000620309 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
PSMB3-212ENST00000620309 WASLO00401 505 aaPredicted RBP9.86□□□□□ -0.83
PSMB3-212ENST00000620309 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
PSMB3-212ENST00000620309 UNC5CLQ8IV45 518 aa9.86□□□□□ -0.83
PSMB3-212ENST00000620309 NUTM2FA1L443 756 aa9.85□□□□□ -0.83
PSMB3-212ENST00000620309 ZNF316A6NFI3 1004 aaPredicted RBP9.85□□□□□ -0.83
PSMB3-212ENST00000620309 TMF1P82094 1093 aa9.85□□□□□ -0.83
PSMB3-212ENST00000620309 PSME1Q06323 249 aa9.85□□□□□ -0.83
PSMB3-212ENST00000620309 PRR36Q9H6K5 1346 aa9.84□□□□□ -0.83
PSMB3-212ENST00000620309 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
PSMB3-212ENST00000620309 PHF8Q9UPP1 1060 aa9.84□□□□□ -0.83
PSMB3-212ENST00000620309 NRAPQ86VF7 1730 aa9.83□□□□□ -0.84
PSMB3-212ENST00000620309 YY1P25490 414 aa9.83□□□□□ -0.84
PSMB3-212ENST00000620309 SEPT12Q8IYM1 358 aa9.83□□□□□ -0.84
PSMB3-212ENST00000620309 PUS7Q96PZ0 661 aaKnown RBP9.83□□□□□ -0.84
PSMB3-212ENST00000620309 ARHGEF10O15013 1369 aa9.83□□□□□ -0.84
PSMB3-212ENST00000620309 TNS3Q68CZ2 1445 aa9.82□□□□□ -0.84
PSMB3-212ENST00000620309 PHRF1Q9P1Y6 1649 aaKnown RBP9.82□□□□□ -0.84
PSMB3-212ENST00000620309 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
PSMB3-212ENST00000620309 NGDNQ8NEJ9 315 aaKnown RBP9.82□□□□□ -0.84
PSMB3-212ENST00000620309 CDK19Q9BWU1 502 aa9.82□□□□□ -0.84
PSMB3-212ENST00000620309 RREB1Q92766 1687 aa9.82□□□□□ -0.84
PSMB3-212ENST00000620309 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
PSMB3-212ENST00000620309 A0A1W2PP64 1363 aa9.81□□□□□ -0.84
PSMB3-212ENST00000620309 POLR3AO14802 1390 aaPredicted RBP9.81□□□□□ -0.84
PSMB3-212ENST00000620309 ANKRD36BQ8N2N9 1353 aa9.81□□□□□ -0.84
PSMB3-212ENST00000620309 FOXO3O43524 673 aa9.81□□□□□ -0.84
PSMB3-212ENST00000620309 HAP1P54257 671 aaPredicted RBP9.81□□□□□ -0.84
PSMB3-212ENST00000620309 VPS72Q15906 364 aa9.81□□□□□ -0.84
PSMB3-212ENST00000620309 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
PSMB3-212ENST00000620309 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
PSMB3-212ENST00000620309 BRD4O60885 1362 aaPredicted RBP9.8□□□□□ -0.84
PSMB3-212ENST00000620309 BAG6P46379 1132 aa9.8□□□□□ -0.84
PSMB3-212ENST00000620309 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
PSMB3-212ENST00000620309 KRT27Q7Z3Y8 459 aa9.8□□□□□ -0.84
PSMB3-212ENST00000620309 NUDT16Q96DE0 195 aaKnown RBP9.8□□□□□ -0.84
PSMB3-212ENST00000620309 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
PSMB3-212ENST00000620309 CCDC61Q9Y6R9 512 aa9.8□□□□□ -0.84
PSMB3-212ENST00000620309 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
PSMB3-212ENST00000620309 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
PSMB3-212ENST00000620309 R3HDM1Q15032 1099 aaKnown RBP9.79□□□□□ -0.84
PSMB3-212ENST00000620309 PMFBP1Q8TBY8 1022 aa9.79□□□□□ -0.84
PSMB3-212ENST00000620309 USP6P35125 1406 aa9.79□□□□□ -0.84
PSMB3-212ENST00000620309 SSH2Q76I76 1423 aa9.79□□□□□ -0.84
PSMB3-212ENST00000620309 LTN1O94822 1766 aa9.78□□□□□ -0.84
PSMB3-212ENST00000620309 CAMTA1Q9Y6Y1 1673 aa9.78□□□□□ -0.84
PSMB3-212ENST00000620309 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
PSMB3-212ENST00000620309 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
PSMB3-212ENST00000620309 KRT28Q7Z3Y7 464 aa9.78□□□□□ -0.84
PSMB3-212ENST00000620309 EDC4Q6P2E9 1401 aaKnown RBP9.78□□□□□ -0.84
PSMB3-212ENST00000620309 NSD3Q9BZ95 1437 aa9.78□□□□□ -0.84
PSMB3-212ENST00000620309 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
PSMB3-212ENST00000620309 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
PSMB3-212ENST00000620309 PAK3O75914 559 aaPredicted RBP9.77□□□□□ -0.85
PSMB3-212ENST00000620309 XPCQ01831 940 aaPredicted RBP9.77□□□□□ -0.85
PSMB3-212ENST00000620309 CEP350Q5VT06 3117 aa9.77□□□□□ -0.85
PSMB3-212ENST00000620309 HDGFL2Q7Z4V5 671 aaPredicted RBP9.76□□□□□ -0.85
PSMB3-212ENST00000620309 ACEP12821 1306 aa9.76□□□□□ -0.85
PSMB3-212ENST00000620309 OVOS2A0A0J9YW53 1432 aa9.75□□□□□ -0.85
PSMB3-212ENST00000620309 OVOS2Q6IE36 1432 aa9.75□□□□□ -0.85
PSMB3-212ENST00000620309 PLEKHG3A1L390 1219 aa9.75□□□□□ -0.85
PSMB3-212ENST00000620309 CAMKK2Q96RR4 588 aa9.75□□□□□ -0.85
PSMB3-212ENST00000620309 ZNF692Q9BU19 519 aaPredicted RBP9.75□□□□□ -0.85
PSMB3-212ENST00000620309 SLIT3O75094 1523 aa9.75□□□□□ -0.85
PSMB3-212ENST00000620309 TMC1Q8TDI8 760 aa9.74□□□□□ -0.85
PSMB3-212ENST00000620309 TERF2IPQ9NYB0 399 aa9.74□□□□□ -0.85
PSMB3-212ENST00000620309 MAP2P11137 1827 aaKnown RBP9.74□□□□□ -0.85
PSMB3-212ENST00000620309 KTN1Q86UP2 1357 aaKnown RBP9.74□□□□□ -0.85
PSMB3-212ENST00000620309 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
PSMB3-212ENST00000620309 NFAT5O94916 1531 aa9.73□□□□□ -0.85
PSMB3-212ENST00000620309 EZH2Q15910 746 aaKnown RBP9.73□□□□□ -0.85
PSMB3-212ENST00000620309 POLR3GLQ9BT43 218 aa9.73□□□□□ -0.85
PSMB3-212ENST00000620309 SLC12A5Q9H2X9 1139 aa9.73□□□□□ -0.85
PSMB3-212ENST00000620309 NSD2O96028 1365 aa9.73□□□□□ -0.85
PSMB3-212ENST00000620309 PARD3Q8TEW0 1356 aa9.73□□□□□ -0.85
PSMB3-212ENST00000620309 PEAK1Q9H792 1746 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms