RNA–Protein interactions for RNA: ENST00000617244.1

AC040978.1-201, humanhuman

BASIC

Gene AC040978.1, Length 1,282 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040978.1-201ENST00000617244 C20orf194Q5TEA3 1177 aa11.53□□□□□ -0.56
AC040978.1-201ENST00000617244 TRAK1Q9UPV9 953 aa11.53□□□□□ -0.56
AC040978.1-201ENST00000617244 TBX22Q9Y458 520 aa11.53□□□□□ -0.56
AC040978.1-201ENST00000617244 SALL2Q9Y467 1007 aaPredicted RBP11.53□□□□□ -0.56
AC040978.1-201ENST00000617244 CHD2O14647 1828 aaKnown RBP11.52□□□□□ -0.57
AC040978.1-201ENST00000617244 UBE2Q2Q8WVN8 375 aa11.52□□□□□ -0.57
AC040978.1-201ENST00000617244 RWDD1Q9H446 243 aaPredicted RBP11.52□□□□□ -0.57
AC040978.1-201ENST00000617244 YTHDC2Q9H6S0 1430 aaKnown RBP11.52□□□□□ -0.57
AC040978.1-201ENST00000617244 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
AC040978.1-201ENST00000617244 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
AC040978.1-201ENST00000617244 ANO8Q9HCE9 1232 aaPredicted RBP11.51□□□□□ -0.57
AC040978.1-201ENST00000617244 NSD2O96028 1365 aa11.51□□□□□ -0.57
AC040978.1-201ENST00000617244 MYOM1P52179 1685 aa11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 ARHGEF28Q8N1W1 1705 aaKnown RBP11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 SAFB2Q14151 953 aaKnown RBP eCLIP11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 POGKQ9P215 609 aa11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 PIK3R4Q99570 1358 aa11.5□□□□□ -0.57
AC040978.1-201ENST00000617244 FRAT2O75474 233 aaPredicted RBP11.49□□□□□ -0.57
AC040978.1-201ENST00000617244 TBC1D32Q96NH3 1257 aa11.49□□□□□ -0.57
AC040978.1-201ENST00000617244 USP19O94966 1318 aa11.49□□□□□ -0.57
AC040978.1-201ENST00000617244 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
AC040978.1-201ENST00000617244 KCNA6P17658 529 aa11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 RUNDC1Q96C34 613 aa11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 CHMP4BQ9H444 224 aaKnown RBP11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 MYH16Q9H6N6 1097 aa11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 ZNF335Q9H4Z2 1342 aaPredicted RBP11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 PTPRUQ92729 1446 aa11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 QRICH2Q9H0J4 1663 aa11.48□□□□□ -0.57
AC040978.1-201ENST00000617244 STRCP1A6NGW2 1772 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 NWD1Q149M9 1564 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 CPS1P31327 1500 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 APAF1O14727 1248 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 GLIPR1L2Q4G1C9 344 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 WWC1Q8IX03 1113 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 BRPF3Q9ULD4 1205 aa11.47□□□□□ -0.57
AC040978.1-201ENST00000617244 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
AC040978.1-201ENST00000617244 RGS3P49796 1198 aa11.46□□□□□ -0.57
AC040978.1-201ENST00000617244 PROSER2Q86WR7 435 aaPredicted RBP11.46□□□□□ -0.57
AC040978.1-201ENST00000617244 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
AC040978.1-201ENST00000617244 PRAM1Q96QH2 718 aa11.46□□□□□ -0.57
AC040978.1-201ENST00000617244 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.57
AC040978.1-201ENST00000617244 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
AC040978.1-201ENST00000617244 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
AC040978.1-201ENST00000617244 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
AC040978.1-201ENST00000617244 KIF16BQ96L93 1317 aa11.45□□□□□ -0.58
AC040978.1-201ENST00000617244 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
AC040978.1-201ENST00000617244 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
AC040978.1-201ENST00000617244 CHMP5Q9NZZ3 219 aa11.45□□□□□ -0.58
AC040978.1-201ENST00000617244 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 MINK1Q8N4C8 1332 aaPredicted RBP11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 FSD2A1L4K1 749 aa11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 MRE11P49959 708 aa11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 RARSP54136 660 aaKnown RBP11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 HDAC1Q13547 482 aaPredicted RBP11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 WAPLQ7Z5K2 1190 aa11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
AC040978.1-201ENST00000617244 TECPR2O15040 1411 aa11.43□□□□□ -0.58
AC040978.1-201ENST00000617244 IL16Q14005 1332 aa11.43□□□□□ -0.58
AC040978.1-201ENST00000617244 GOLGA6L3A6NEY3 463 aa11.43□□□□□ -0.58
AC040978.1-201ENST00000617244 IGHDP01880 384 aa11.43□□□□□ -0.58
AC040978.1-201ENST00000617244 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
AC040978.1-201ENST00000617244 PNNQ9H307 717 aaKnown RBP11.43□□□□□ -0.58
AC040978.1-201ENST00000617244 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
AC040978.1-201ENST00000617244 CLCN1P35523 988 aa11.42□□□□□ -0.58
AC040978.1-201ENST00000617244 SNX21Q969T3 373 aa11.42□□□□□ -0.58
AC040978.1-201ENST00000617244 NALCNQ8IZF0 1738 aa11.41□□□□□ -0.58
AC040978.1-201ENST00000617244 BCAR3O75815 825 aa11.41□□□□□ -0.58
AC040978.1-201ENST00000617244 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
AC040978.1-201ENST00000617244 XIRP1Q702N8 1843 aaKnown RBP11.4□□□□□ -0.58
AC040978.1-201ENST00000617244 MCM4P33991 863 aa11.4□□□□□ -0.58
AC040978.1-201ENST00000617244 SLC4A3P48751 1232 aa11.4□□□□□ -0.58
AC040978.1-201ENST00000617244 MVPQ14764 893 aaKnown RBP11.39□□□□□ -0.59
AC040978.1-201ENST00000617244 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
AC040978.1-201ENST00000617244 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.39□□□□□ -0.59
AC040978.1-201ENST00000617244 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
AC040978.1-201ENST00000617244 LRRC7Q96NW7 1537 aa11.39□□□□□ -0.59
AC040978.1-201ENST00000617244 MSH6P52701 1360 aa11.39□□□□□ -0.59
AC040978.1-201ENST00000617244 EVC2Q86UK5 1308 aa11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 ADGRB2O60241 1585 aa11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 ADGRL3Q9HAR2 1447 aa11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 SIRT1Q96EB6 747 aa11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 TBC1D2Q9BYX2 928 aa11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 RTN4Q9NQC3 1192 aaKnown RBP11.38□□□□□ -0.59
AC040978.1-201ENST00000617244 SHPRHQ149N8 1683 aa11.37□□□□□ -0.59
AC040978.1-201ENST00000617244 NCOA3Q9Y6Q9 1424 aa11.37□□□□□ -0.59
AC040978.1-201ENST00000617244 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
AC040978.1-201ENST00000617244 NUTM2FA1L443 756 aa11.37□□□□□ -0.59
AC040978.1-201ENST00000617244 ATF3P18847 181 aa11.37□□□□□ -0.59
AC040978.1-201ENST00000617244 RBM25P49756 843 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms