RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 ZNF396Q96N95 335 aaPredicted RBP12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 ATF7IPQ6VMQ6 1270 aa12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 HIP1O00291 1037 aa12.71□□□□□ -0.37
CLTCL1-209ENST00000617103 FILIP1LQ4L180 1135 aa12.71□□□□□ -0.37
CLTCL1-209ENST00000617103 SMARCE1Q969G3 411 aa12.71□□□□□ -0.37
CLTCL1-209ENST00000617103 AXDND1Q5T1B0 1012 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-209ENST00000617103 TTLL5Q6EMB2 1281 aa12.71□□□□□ -0.38
CLTCL1-209ENST00000617103 TSPYL1Q9H0U9 437 aa12.71□□□□□ -0.38
CLTCL1-209ENST00000617103 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.38
CLTCL1-209ENST00000617103 STK38Q15208 465 aa12.7□□□□□ -0.38
CLTCL1-209ENST00000617103 CYP46A1Q9Y6A2 500 aa12.7□□□□□ -0.38
CLTCL1-209ENST00000617103 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
CLTCL1-209ENST00000617103 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-209ENST00000617103 ERLIN1O75477 346 aa12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 OFD1O75665 1012 aa12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 FYCO1Q9BQS8 1478 aa12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 NCOA2Q15596 1464 aa12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 GNAI2P04899 355 aa12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
CLTCL1-209ENST00000617103 XBP1P17861 261 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 WASHC4Q2M389 1173 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 SERPINC1P01008 464 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 ANKRD1Q15327 319 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 SYCE3A1L190 88 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 G3V3G9 751 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 DCAF8Q5TAQ9 597 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 BRMS1Q9HCU9 246 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 CASKIN1Q8WXD9 1431 aa12.68□□□□□ -0.38
CLTCL1-209ENST00000617103 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 UBE2Q2Q8WVN8 375 aa12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 PRM3Q9NNZ6 103 aa12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 SLFN5Q08AF3 891 aa12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
CLTCL1-209ENST00000617103 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 RIC3Q7Z5B4 369 aa12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 KIAA0754O94854 1291 aa12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 MYO6Q9UM54 1294 aa12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 USP8P40818 1118 aa12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 LRRCC1Q9C099 1032 aa12.66□□□□□ -0.38
CLTCL1-209ENST00000617103 ME1P48163 572 aa12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 CEP57L1Q8IYX8 460 aa12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 FILIP1Q7Z7B0 1213 aa12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 ERC1Q8IUD2 1116 aa12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 UBXN4Q92575 508 aa12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 PTPRGP23470 1445 aa12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
CLTCL1-209ENST00000617103 CBFA2T2O43439 604 aa12.65□□□□□ -0.39
CLTCL1-209ENST00000617103 PPFIBP1Q86W92 1011 aa12.65□□□□□ -0.39
CLTCL1-209ENST00000617103 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.39
CLTCL1-209ENST00000617103 SRCIN1Q9C0H9 1055 aa12.65□□□□□ -0.39
CLTCL1-209ENST00000617103 SMARCA4P51532 1647 aa12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 SPATA32Q96LK8 384 aa12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 CBX1P83916 185 aa12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 TBC1D2Q9BYX2 928 aa12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 CCT4P50991 539 aaKnown RBP12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 HFM1A2PYH4 1435 aa12.64□□□□□ -0.39
CLTCL1-209ENST00000617103 CFAP70Q5T0N1 1121 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 ZNHIT6Q9NWK9 470 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 MAP3K11Q16584 847 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 CT47A1Q5JQC4 288 aaPredicted RBP12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 DEF6Q9H4E7 631 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 DACH1Q9UI36 760 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 MCM5P33992 734 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
CLTCL1-209ENST00000617103 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 EPS15P42566 896 aa12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 FAM177A1Q8N128 213 aaPredicted RBP12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 TMCO3Q6UWJ1 677 aa12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 MAGEC2Q9UBF1 373 aaPredicted RBP12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms