RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 AAMPQ13685 434 aa19.09■□□□□ 0.65
CDKN1A-208ENST00000615513 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
CDKN1A-208ENST00000615513 KNDC1Q76NI1 1749 aa19.09■□□□□ 0.65
CDKN1A-208ENST00000615513 WASLO00401 505 aaPredicted RBP19.09■□□□□ 0.65
CDKN1A-208ENST00000615513 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
CDKN1A-208ENST00000615513 U2SURPO15042 1029 aaKnown RBP19.08■□□□□ 0.64
CDKN1A-208ENST00000615513 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.64
CDKN1A-208ENST00000615513 DIAPH1O60610 1272 aaKnown RBP19.07■□□□□ 0.64
CDKN1A-208ENST00000615513 CANXP27824 592 aaKnown RBP19.07■□□□□ 0.64
CDKN1A-208ENST00000615513 MAPK8IP3Q9UPT6 1336 aa19.06■□□□□ 0.64
CDKN1A-208ENST00000615513 CDC42BPGQ6DT37 1551 aa19.06■□□□□ 0.64
CDKN1A-208ENST00000615513 EDC4Q6P2E9 1401 aaKnown RBP19.06■□□□□ 0.64
CDKN1A-208ENST00000615513 TMPOP42166 694 aaKnown RBP19.06■□□□□ 0.64
CDKN1A-208ENST00000615513 TMEM2Q9UHN6 1383 aa19.06■□□□□ 0.64
CDKN1A-208ENST00000615513 CPS1P31327 1500 aa19.06■□□□□ 0.64
CDKN1A-208ENST00000615513 IL16Q14005 1332 aa19.05■□□□□ 0.64
CDKN1A-208ENST00000615513 CLUAP1Q96AJ1 413 aa19.04■□□□□ 0.64
CDKN1A-208ENST00000615513 PPIP5K1Q6PFW1 1433 aa19.04■□□□□ 0.64
CDKN1A-208ENST00000615513 UBR1Q8IWV7 1749 aa19.03■□□□□ 0.64
CDKN1A-208ENST00000615513 FCHSD2O94868 740 aa19.03■□□□□ 0.64
CDKN1A-208ENST00000615513 TXNDC2Q86VQ3 553 aa19.02■□□□□ 0.64
CDKN1A-208ENST00000615513 TRIM35Q9UPQ4 493 aa19.02■□□□□ 0.64
CDKN1A-208ENST00000615513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDKN1A-208ENST00000615513 PANK1Q8TE04 598 aa19.01■□□□□ 0.63
CDKN1A-208ENST00000615513 POLKQ9UBT6 870 aa19.01■□□□□ 0.63
CDKN1A-208ENST00000615513 ZBTB47Q9UFB7 747 aaPredicted RBP19.01■□□□□ 0.63
CDKN1A-208ENST00000615513 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
CDKN1A-208ENST00000615513 COG6Q9Y2V7 657 aa19.01■□□□□ 0.63
CDKN1A-208ENST00000615513 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
CDKN1A-208ENST00000615513 SKAP1Q86WV1 359 aa19■□□□□ 0.63
CDKN1A-208ENST00000615513 NUDT16Q96DE0 195 aaKnown RBP19■□□□□ 0.63
CDKN1A-208ENST00000615513 AATKQ6ZMQ8 1374 aa18.99■□□□□ 0.63
CDKN1A-208ENST00000615513 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
CDKN1A-208ENST00000615513 ADAMTS13Q76LX8 1427 aa18.98■□□□□ 0.63
CDKN1A-208ENST00000615513 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
CDKN1A-208ENST00000615513 RIPK4P57078 832 aa18.97■□□□□ 0.63
CDKN1A-208ENST00000615513 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
CDKN1A-208ENST00000615513 ZNF692Q9BU19 519 aaPredicted RBP18.97■□□□□ 0.63
CDKN1A-208ENST00000615513 MON2Q7Z3U7 1717 aa18.96■□□□□ 0.63
CDKN1A-208ENST00000615513 CDK12Q9NYV4 1490 aaPredicted RBP18.96■□□□□ 0.63
CDKN1A-208ENST00000615513 IGHDP01880 384 aa18.96■□□□□ 0.63
CDKN1A-208ENST00000615513 PMFBP1Q8TBY8 1022 aa18.96■□□□□ 0.63
CDKN1A-208ENST00000615513 RSPH6AQ9H0K4 717 aa18.96■□□□□ 0.63
CDKN1A-208ENST00000615513 LRRC7Q96NW7 1537 aa18.96■□□□□ 0.63
CDKN1A-208ENST00000615513 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
CDKN1A-208ENST00000615513 NEFMP07197 916 aa18.95■□□□□ 0.62
CDKN1A-208ENST00000615513 TSR2Q969E8 191 aaKnown RBP18.95■□□□□ 0.62
CDKN1A-208ENST00000615513 ZKSCAN2Q63HK3 967 aa18.94■□□□□ 0.62
CDKN1A-208ENST00000615513 ROBO2Q9HCK4 1378 aa18.94■□□□□ 0.62
CDKN1A-208ENST00000615513 RLBP1P12271 317 aa18.94■□□□□ 0.62
CDKN1A-208ENST00000615513 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
CDKN1A-208ENST00000615513 NME9Q86XW9 330 aa18.94■□□□□ 0.62
CDKN1A-208ENST00000615513 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
CDKN1A-208ENST00000615513 COG3Q96JB2 828 aa18.93■□□□□ 0.62
CDKN1A-208ENST00000615513 AKAP12Q02952 1782 aa18.93■□□□□ 0.62
CDKN1A-208ENST00000615513 PRKAR2BP31323 418 aa18.92■□□□□ 0.62
CDKN1A-208ENST00000615513 C8orf34Q49A92 452 aa18.92■□□□□ 0.62
CDKN1A-208ENST00000615513 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
CDKN1A-208ENST00000615513 PPM1GO15355 546 aaPredicted RBP18.92■□□□□ 0.62
CDKN1A-208ENST00000615513 DDRGK1Q96HY6 314 aa18.92■□□□□ 0.62
CDKN1A-208ENST00000615513 C3P01024 1663 aa18.92■□□□□ 0.62
CDKN1A-208ENST00000615513 IL13P35225 146 aa18.91■□□□□ 0.62
CDKN1A-208ENST00000615513 MVPQ14764 893 aaKnown RBP18.91■□□□□ 0.62
CDKN1A-208ENST00000615513 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
CDKN1A-208ENST00000615513 RGS3P49796 1198 aa18.91■□□□□ 0.62
CDKN1A-208ENST00000615513 DZIP1LQ8IYY4 767 aaKnown RBP18.91■□□□□ 0.62
CDKN1A-208ENST00000615513 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
CDKN1A-208ENST00000615513 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
CDKN1A-208ENST00000615513 FBLN1P23142 703 aa18.9■□□□□ 0.62
CDKN1A-208ENST00000615513 LTKP29376 864 aa18.9■□□□□ 0.62
CDKN1A-208ENST00000615513 SMC4Q9NTJ3 1288 aa18.9■□□□□ 0.62
CDKN1A-208ENST00000615513 CALD1Q05682 793 aaKnown RBP18.89■□□□□ 0.62
CDKN1A-208ENST00000615513 NFE2L2Q16236 605 aa18.89■□□□□ 0.62
CDKN1A-208ENST00000615513 TNNQ9UQP3 1299 aa18.89■□□□□ 0.62
CDKN1A-208ENST00000615513 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.61
CDKN1A-208ENST00000615513 ZNF428Q96B54 188 aa18.89■□□□□ 0.61
CDKN1A-208ENST00000615513 EID1Q9Y6B2 187 aa18.89■□□□□ 0.61
CDKN1A-208ENST00000615513 SLIT1O75093 1534 aa18.89■□□□□ 0.61
CDKN1A-208ENST00000615513 ARHGAP23Q9P227 1491 aa18.88■□□□□ 0.61
CDKN1A-208ENST00000615513 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
CDKN1A-208ENST00000615513 PCDHB15Q9Y5E8 787 aa18.88■□□□□ 0.61
CDKN1A-208ENST00000615513 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
CDKN1A-208ENST00000615513 PLEKHG3A1L390 1219 aa18.88■□□□□ 0.61
CDKN1A-208ENST00000615513 ALDH1L2Q3SY69 923 aa18.88■□□□□ 0.61
CDKN1A-208ENST00000615513 RWDD1Q9H446 243 aaPredicted RBP18.87■□□□□ 0.61
CDKN1A-208ENST00000615513 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.87■□□□□ 0.61
CDKN1A-208ENST00000615513 ZRANB1Q9UGI0 708 aa18.87■□□□□ 0.61
CDKN1A-208ENST00000615513 KIF16BQ96L93 1317 aa18.87■□□□□ 0.61
CDKN1A-208ENST00000615513 TOPAZ1Q8N9V7 1692 aa18.87■□□□□ 0.61
CDKN1A-208ENST00000615513 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
CDKN1A-208ENST00000615513 TRIM27P14373 513 aa18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 IPO8O15397 1037 aaKnown RBP18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 HMOX1P09601 288 aa18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 BRPF1P55201 1214 aaPredicted RBP18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 DDX19BQ9UMR2 479 aa18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 TBX22Q9Y458 520 aa18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 NRKQ7Z2Y5 1582 aa18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
CDKN1A-208ENST00000615513 PTPRUQ92729 1446 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms