RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
CDKN1A-208ENST00000615513 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.94
CDKN1A-208ENST00000615513 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
CDKN1A-208ENST00000615513 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
CDKN1A-208ENST00000615513 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
CDKN1A-208ENST00000615513 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
CDKN1A-208ENST00000615513 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
CDKN1A-208ENST00000615513 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
CDKN1A-208ENST00000615513 NACADO15069 1562 aa25.2■■□□□ 1.63
CDKN1A-208ENST00000615513 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
CDKN1A-208ENST00000615513 ABCC9O60706 1549 aa25.15■■□□□ 1.62
CDKN1A-208ENST00000615513 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
CDKN1A-208ENST00000615513 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
CDKN1A-208ENST00000615513 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
CDKN1A-208ENST00000615513 CECR2Q9BXF3 1484 aa24.55■■□□□ 1.52
CDKN1A-208ENST00000615513 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
CDKN1A-208ENST00000615513 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
CDKN1A-208ENST00000615513 WIZO95785 1651 aa24.3■■□□□ 1.48
CDKN1A-208ENST00000615513 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
CDKN1A-208ENST00000615513 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
CDKN1A-208ENST00000615513 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
CDKN1A-208ENST00000615513 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
CDKN1A-208ENST00000615513 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
CDKN1A-208ENST00000615513 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
CDKN1A-208ENST00000615513 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
CDKN1A-208ENST00000615513 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
CDKN1A-208ENST00000615513 SMARCA2P51531 1590 aa23.87■■□□□ 1.41
CDKN1A-208ENST00000615513 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
CDKN1A-208ENST00000615513 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
CDKN1A-208ENST00000615513 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
CDKN1A-208ENST00000615513 FAM9AQ8IZU1 332 aaPredicted RBP23.71■■□□□ 1.39
CDKN1A-208ENST00000615513 HRCP23327 699 aa23.66■■□□□ 1.38
CDKN1A-208ENST00000615513 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
CDKN1A-208ENST00000615513 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
CDKN1A-208ENST00000615513 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
CDKN1A-208ENST00000615513 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.35
CDKN1A-208ENST00000615513 EEA1Q15075 1411 aa23.42■■□□□ 1.34
CDKN1A-208ENST00000615513 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
CDKN1A-208ENST00000615513 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
CDKN1A-208ENST00000615513 SOGA1O94964 1423 aa23.32■■□□□ 1.32
CDKN1A-208ENST00000615513 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
CDKN1A-208ENST00000615513 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
CDKN1A-208ENST00000615513 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
CDKN1A-208ENST00000615513 SYNJ1O43426 1573 aa23.22■■□□□ 1.31
CDKN1A-208ENST00000615513 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
CDKN1A-208ENST00000615513 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
CDKN1A-208ENST00000615513 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
CDKN1A-208ENST00000615513 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
CDKN1A-208ENST00000615513 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
CDKN1A-208ENST00000615513 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
CDKN1A-208ENST00000615513 KIF21BO75037 1637 aa23.04■■□□□ 1.28
CDKN1A-208ENST00000615513 BIVM-ERCC5R4GMW8 1640 aa23.01■■□□□ 1.27
CDKN1A-208ENST00000615513 ZEB1P37275 1124 aaPredicted RBP23.01■■□□□ 1.27
CDKN1A-208ENST00000615513 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
CDKN1A-208ENST00000615513 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
CDKN1A-208ENST00000615513 CFTRP13569 1480 aa22.98■■□□□ 1.27
CDKN1A-208ENST00000615513 CUX1P39880 1505 aa22.84■■□□□ 1.25
CDKN1A-208ENST00000615513 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
CDKN1A-208ENST00000615513 RAPGEF2Q9Y4G8 1499 aa22.8■■□□□ 1.24
CDKN1A-208ENST00000615513 CLIP1P30622 1438 aa22.78■■□□□ 1.24
CDKN1A-208ENST00000615513 ERICH3Q5RHP9 1530 aa22.76■■□□□ 1.23
CDKN1A-208ENST00000615513 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
CDKN1A-208ENST00000615513 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
CDKN1A-208ENST00000615513 PRXQ9BXM0 1461 aa22.74■■□□□ 1.23
CDKN1A-208ENST00000615513 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
CDKN1A-208ENST00000615513 VPS8Q8N3P4 1428 aa22.69■■□□□ 1.22
CDKN1A-208ENST00000615513 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
CDKN1A-208ENST00000615513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
CDKN1A-208ENST00000615513 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
CDKN1A-208ENST00000615513 FANCD2Q9BXW9 1451 aa22.49■■□□□ 1.19
CDKN1A-208ENST00000615513 APLP2Q06481 763 aa22.49■■□□□ 1.19
CDKN1A-208ENST00000615513 CUX2O14529 1486 aa22.48■■□□□ 1.19
CDKN1A-208ENST00000615513 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
CDKN1A-208ENST00000615513 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
CDKN1A-208ENST00000615513 IGF1RP08069 1367 aa22.45■■□□□ 1.19
CDKN1A-208ENST00000615513 DNMBPQ6XZF7 1577 aa22.4■■□□□ 1.18
CDKN1A-208ENST00000615513 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
CDKN1A-208ENST00000615513 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
CDKN1A-208ENST00000615513 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
CDKN1A-208ENST00000615513 ARHGAP35Q9NRY4 1499 aa22.33■■□□□ 1.16
CDKN1A-208ENST00000615513 TOPBP1Q92547 1522 aa22.32■■□□□ 1.16
CDKN1A-208ENST00000615513 NESP48681 1621 aa22.31■■□□□ 1.16
CDKN1A-208ENST00000615513 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
CDKN1A-208ENST00000615513 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
CDKN1A-208ENST00000615513 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
CDKN1A-208ENST00000615513 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
CDKN1A-208ENST00000615513 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
CDKN1A-208ENST00000615513 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
CDKN1A-208ENST00000615513 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
CDKN1A-208ENST00000615513 CUL7Q14999 1698 aa22.16■■□□□ 1.14
CDKN1A-208ENST00000615513 MAP3K1Q13233 1512 aa22.16■■□□□ 1.14
CDKN1A-208ENST00000615513 RRBP1Q9P2E9 1410 aaKnown RBP22.13■■□□□ 1.13
CDKN1A-208ENST00000615513 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
CDKN1A-208ENST00000615513 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
CDKN1A-208ENST00000615513 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
CDKN1A-208ENST00000615513 EFCAB5A4FU69 1503 aa22.05■■□□□ 1.12
CDKN1A-208ENST00000615513 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
CDKN1A-208ENST00000615513 DNAJC5BQ9UF47 199 aa22.02■■□□□ 1.12
CDKN1A-208ENST00000615513 CCNB3Q8WWL7 1395 aa22.01■■□□□ 1.11
CDKN1A-208ENST00000615513 CLSPNQ9HAW4 1339 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms