RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SUPT6HQ7KZ85 1726 aaKnown RBP16.32■□□□□ 0.2
CHD1-212ENST00000614616 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
CHD1-212ENST00000614616 LUC7LQ9NQ29 371 aaKnown RBP16.31■□□□□ 0.2
CHD1-212ENST00000614616 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
CHD1-212ENST00000614616 CCDC181Q5TID7 509 aa16.31■□□□□ 0.2
CHD1-212ENST00000614616 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
CHD1-212ENST00000614616 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
CHD1-212ENST00000614616 SAFBQ15424 915 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHD1-212ENST00000614616 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
CHD1-212ENST00000614616 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
CHD1-212ENST00000614616 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
CHD1-212ENST00000614616 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
CHD1-212ENST00000614616 NEK4P51957 841 aa16.31■□□□□ 0.2
CHD1-212ENST00000614616 KIAA1328Q86T90 577 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 DACH1Q9UI36 760 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
CHD1-212ENST00000614616 MARCH6O60337 910 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 MEX3CQ5U5Q3 659 aaKnown RBP16.3■□□□□ 0.2
CHD1-212ENST00000614616 RUNDC1Q96C34 613 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 APAF1O14727 1248 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 KRT85P78386 507 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 ERC2O15083 957 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 NEMFO60524 1076 aa16.3■□□□□ 0.2
CHD1-212ENST00000614616 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
CHD1-212ENST00000614616 API5Q9BZZ5 524 aaKnown RBP16.29■□□□□ 0.2
CHD1-212ENST00000614616 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 ZSCAN12O43309 604 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 HS1BP3Q53T59 392 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 WASHC2AQ641Q2 1341 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 CCDC144AA2RUR9 1427 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 UACAQ9BZF9 1416 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
CHD1-212ENST00000614616 CUX2O14529 1486 aa16.28■□□□□ 0.2
CHD1-212ENST00000614616 SEPT7Q16181 437 aaKnown RBP16.28■□□□□ 0.2
CHD1-212ENST00000614616 PDZRN3Q9UPQ7 1066 aa16.28■□□□□ 0.2
CHD1-212ENST00000614616 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
CHD1-212ENST00000614616 MPNDQ8N594 471 aa16.28■□□□□ 0.2
CHD1-212ENST00000614616 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHD1-212ENST00000614616 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
CHD1-212ENST00000614616 JAKMIP3Q5VZ66 844 aa16.28■□□□□ 0.2
CHD1-212ENST00000614616 CNTROBQ8N137 903 aa16.28■□□□□ 0.2
CHD1-212ENST00000614616 LMAN1P49257 510 aa16.27■□□□□ 0.2
CHD1-212ENST00000614616 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.2
CHD1-212ENST00000614616 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
CHD1-212ENST00000614616 GCC1Q96CN9 775 aa16.27■□□□□ 0.2
CHD1-212ENST00000614616 CPSF2Q9P2I0 782 aaKnown RBP16.27■□□□□ 0.2
CHD1-212ENST00000614616 MAGEC2Q9UBF1 373 aaPredicted RBP16.27■□□□□ 0.2
CHD1-212ENST00000614616 SMTNL1A8MU46 457 aa16.26■□□□□ 0.19
CHD1-212ENST00000614616 C16orf45Q96MC5 204 aaPredicted RBP16.26■□□□□ 0.19
CHD1-212ENST00000614616 FEZ1Q99689 392 aa16.26■□□□□ 0.19
CHD1-212ENST00000614616 TRDNQ13061 729 aa16.26■□□□□ 0.19
CHD1-212ENST00000614616 CFAP45Q9UL16 551 aa16.26■□□□□ 0.19
CHD1-212ENST00000614616 ANKRD1Q15327 319 aa16.26■□□□□ 0.19
CHD1-212ENST00000614616 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
CHD1-212ENST00000614616 RASSF4Q9H2L5 321 aa16.26■□□□□ 0.19
CHD1-212ENST00000614616 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
CHD1-212ENST00000614616 GBP2P32456 591 aaPredicted RBP16.25■□□□□ 0.19
CHD1-212ENST00000614616 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
CHD1-212ENST00000614616 EZRP15311 586 aaKnown RBP16.25■□□□□ 0.19
CHD1-212ENST00000614616 ANKRD18AQ8IVF6 992 aa16.24■□□□□ 0.19
CHD1-212ENST00000614616 OFD1O75665 1012 aa16.24■□□□□ 0.19
CHD1-212ENST00000614616 CLGNO14967 610 aa16.24■□□□□ 0.19
CHD1-212ENST00000614616 TOMM22Q9NS69 142 aa16.24■□□□□ 0.19
CHD1-212ENST00000614616 TRIM34Q9BYJ4 488 aa16.24■□□□□ 0.19
CHD1-212ENST00000614616 CEP135Q66GS9 1140 aa16.23■□□□□ 0.19
CHD1-212ENST00000614616 SFPQP23246 707 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD1-212ENST00000614616 JMYQ8N9B5 988 aa16.23■□□□□ 0.19
CHD1-212ENST00000614616 LRRFIP2Q9Y608 721 aaKnown RBP16.23■□□□□ 0.19
CHD1-212ENST00000614616 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD1-212ENST00000614616 OGFRQ9NZT2 677 aa16.23■□□□□ 0.19
CHD1-212ENST00000614616 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
CHD1-212ENST00000614616 CEP57L1Q8IYX8 460 aa16.23■□□□□ 0.19
CHD1-212ENST00000614616 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
CHD1-212ENST00000614616 KIF5CO60282 957 aa16.22■□□□□ 0.19
CHD1-212ENST00000614616 GSDMDP57764 484 aa16.22■□□□□ 0.19
CHD1-212ENST00000614616 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
CHD1-212ENST00000614616 RBM28Q9NW13 759 aaKnown RBP16.22■□□□□ 0.19
CHD1-212ENST00000614616 HIP1O00291 1037 aa16.22■□□□□ 0.19
CHD1-212ENST00000614616 RNF187Q5TA31 235 aaPredicted RBP16.22■□□□□ 0.19
CHD1-212ENST00000614616 CCDC171Q6TFL3 1326 aa16.22■□□□□ 0.19
CHD1-212ENST00000614616 FOSBP53539 338 aa16.22■□□□□ 0.19
CHD1-212ENST00000614616 UVSSAQ2YD98 709 aa16.21■□□□□ 0.19
CHD1-212ENST00000614616 ADCY5O95622 1261 aa16.21■□□□□ 0.19
CHD1-212ENST00000614616 SARNPP82979 210 aaKnown RBP16.21■□□□□ 0.19
CHD1-212ENST00000614616 HSP90AB4PQ58FF6 505 aa16.21■□□□□ 0.19
CHD1-212ENST00000614616 CLIP2Q9UDT6 1046 aa16.2■□□□□ 0.18
CHD1-212ENST00000614616 UPF3BQ9BZI7 483 aaKnown RBP16.2■□□□□ 0.18
CHD1-212ENST00000614616 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
CHD1-212ENST00000614616 SPATA24Q86W54 205 aa16.2■□□□□ 0.18
CHD1-212ENST00000614616 DHX37Q8IY37 1157 aaKnown RBP16.2■□□□□ 0.18
CHD1-212ENST00000614616 XRCC6P12956 609 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHD1-212ENST00000614616 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
CHD1-212ENST00000614616 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHD1-212ENST00000614616 TNPO1Q92973 898 aaKnown RBP16.2■□□□□ 0.18
CHD1-212ENST00000614616 ERICH2A1L162 156 aa16.2■□□□□ 0.18
CHD1-212ENST00000614616 XBP1P17861 261 aa16.2■□□□□ 0.18
CHD1-212ENST00000614616 EPB41L2O43491 1005 aaKnown RBP16.19■□□□□ 0.18
CHD1-212ENST00000614616 GOLGA6L9A6NEM1 432 aa16.19■□□□□ 0.18
CHD1-212ENST00000614616 SOX12O15370 315 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms