RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
PCDHGA3-202ENST00000612467 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
PCDHGA3-202ENST00000612467 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
PCDHGA3-202ENST00000612467 METP08581 1390 aa18.18■□□□□ 0.5
PCDHGA3-202ENST00000612467 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
PCDHGA3-202ENST00000612467 NUTM2FA1L443 756 aa18.17■□□□□ 0.5
PCDHGA3-202ENST00000612467 HMOX1P09601 288 aa18.17■□□□□ 0.5
PCDHGA3-202ENST00000612467 NME9Q86XW9 330 aa18.16■□□□□ 0.5
PCDHGA3-202ENST00000612467 RIPK4P57078 832 aa18.16■□□□□ 0.5
PCDHGA3-202ENST00000612467 CCDC27Q2M243 656 aa18.16■□□□□ 0.5
PCDHGA3-202ENST00000612467 EMILIN1Q9Y6C2 1016 aa18.16■□□□□ 0.5
PCDHGA3-202ENST00000612467 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
PCDHGA3-202ENST00000612467 DIAPH1O60610 1272 aaKnown RBP18.15■□□□□ 0.5
PCDHGA3-202ENST00000612467 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
PCDHGA3-202ENST00000612467 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.5
PCDHGA3-202ENST00000612467 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
PCDHGA3-202ENST00000612467 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.49
PCDHGA3-202ENST00000612467 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
PCDHGA3-202ENST00000612467 NINLQ9Y2I6 1382 aa18.14■□□□□ 0.49
PCDHGA3-202ENST00000612467 ADGRB2O60241 1585 aa18.14■□□□□ 0.49
PCDHGA3-202ENST00000612467 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.49
PCDHGA3-202ENST00000612467 ZMYM3Q14202 1370 aa18.13■□□□□ 0.49
PCDHGA3-202ENST00000612467 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
PCDHGA3-202ENST00000612467 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
PCDHGA3-202ENST00000612467 SEC24BO95487 1268 aa18.12■□□□□ 0.49
PCDHGA3-202ENST00000612467 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
PCDHGA3-202ENST00000612467 SSH1Q8WYL5 1049 aa18.12■□□□□ 0.49
PCDHGA3-202ENST00000612467 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
PCDHGA3-202ENST00000612467 AGLP35573 1532 aa18.11■□□□□ 0.49
PCDHGA3-202ENST00000612467 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
PCDHGA3-202ENST00000612467 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
PCDHGA3-202ENST00000612467 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
PCDHGA3-202ENST00000612467 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
PCDHGA3-202ENST00000612467 WASLO00401 505 aaPredicted RBP18.1■□□□□ 0.49
PCDHGA3-202ENST00000612467 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
PCDHGA3-202ENST00000612467 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
PCDHGA3-202ENST00000612467 PPIP5K1Q6PFW1 1433 aa18.09■□□□□ 0.49
PCDHGA3-202ENST00000612467 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
PCDHGA3-202ENST00000612467 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.48
PCDHGA3-202ENST00000612467 NUDT16Q96DE0 195 aaKnown RBP18.08■□□□□ 0.48
PCDHGA3-202ENST00000612467 TRIM27P14373 513 aa18.07■□□□□ 0.48
PCDHGA3-202ENST00000612467 LRRC7Q96NW7 1537 aa18.07■□□□□ 0.48
PCDHGA3-202ENST00000612467 KIF13AQ9H1H9 1805 aa18.07■□□□□ 0.48
PCDHGA3-202ENST00000612467 PNPLA6Q8IY17 1366 aa18.07■□□□□ 0.48
PCDHGA3-202ENST00000612467 ZKSCAN2Q63HK3 967 aa18.07■□□□□ 0.48
PCDHGA3-202ENST00000612467 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
PCDHGA3-202ENST00000612467 NOB1Q9ULX3 412 aaKnown RBP18.07■□□□□ 0.48
PCDHGA3-202ENST00000612467 MAP2P11137 1827 aaKnown RBP18.06■□□□□ 0.48
PCDHGA3-202ENST00000612467 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
PCDHGA3-202ENST00000612467 ELL2O00472 640 aaPredicted RBP18.06■□□□□ 0.48
PCDHGA3-202ENST00000612467 MVPQ14764 893 aaKnown RBP18.06■□□□□ 0.48
PCDHGA3-202ENST00000612467 DZIP1LQ8IYY4 767 aaKnown RBP18.06■□□□□ 0.48
PCDHGA3-202ENST00000612467 PDZRN3Q9UPQ7 1066 aa18.06■□□□□ 0.48
PCDHGA3-202ENST00000612467 PRR36Q9H6K5 1346 aa18.05■□□□□ 0.48
PCDHGA3-202ENST00000612467 SOX12O15370 315 aa18.05■□□□□ 0.48
PCDHGA3-202ENST00000612467 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
PCDHGA3-202ENST00000612467 ITPRIPQ8IWB1 547 aa18.05■□□□□ 0.48
PCDHGA3-202ENST00000612467 MED14O60244 1454 aa18.05■□□□□ 0.48
PCDHGA3-202ENST00000612467 CPS1P31327 1500 aa18.05■□□□□ 0.48
PCDHGA3-202ENST00000612467 SLC26A8Q96RN1 970 aa18.04■□□□□ 0.48
PCDHGA3-202ENST00000612467 NEFMP07197 916 aa18.03■□□□□ 0.48
PCDHGA3-202ENST00000612467 LTKP29376 864 aa18.03■□□□□ 0.48
PCDHGA3-202ENST00000612467 FAM83GA6ND36 823 aa18.02■□□□□ 0.48
PCDHGA3-202ENST00000612467 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
PCDHGA3-202ENST00000612467 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.48
PCDHGA3-202ENST00000612467 DLC1Q96QB1 1528 aa18.02■□□□□ 0.48
PCDHGA3-202ENST00000612467 DCTN1Q14203 1278 aa18.02■□□□□ 0.48
PCDHGA3-202ENST00000612467 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
PCDHGA3-202ENST00000612467 TNRQ92752 1358 aa18.01■□□□□ 0.47
PCDHGA3-202ENST00000612467 USP19O94966 1318 aa18.01■□□□□ 0.47
PCDHGA3-202ENST00000612467 TSPYL6Q8N831 410 aa18.01■□□□□ 0.47
PCDHGA3-202ENST00000612467 ATP7BP35670 1465 aa18.01■□□□□ 0.47
PCDHGA3-202ENST00000612467 FCHSD2O94868 740 aa18.01■□□□□ 0.47
PCDHGA3-202ENST00000612467 CPSF1Q10570 1443 aaKnown RBP18.01■□□□□ 0.47
PCDHGA3-202ENST00000612467 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
PCDHGA3-202ENST00000612467 IL13P35225 146 aa18■□□□□ 0.47
PCDHGA3-202ENST00000612467 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
PCDHGA3-202ENST00000612467 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
PCDHGA3-202ENST00000612467 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
PCDHGA3-202ENST00000612467 DDRGK1Q96HY6 314 aa18■□□□□ 0.47
PCDHGA3-202ENST00000612467 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
PCDHGA3-202ENST00000612467 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
PCDHGA3-202ENST00000612467 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
PCDHGA3-202ENST00000612467 COG3Q96JB2 828 aa17.98■□□□□ 0.47
PCDHGA3-202ENST00000612467 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
PCDHGA3-202ENST00000612467 NFE2L2Q16236 605 aa17.97■□□□□ 0.47
PCDHGA3-202ENST00000612467 TMEM2Q9UHN6 1383 aa17.97■□□□□ 0.47
PCDHGA3-202ENST00000612467 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
PCDHGA3-202ENST00000612467 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
PCDHGA3-202ENST00000612467 C1orf115Q9H7X2 142 aa17.95■□□□□ 0.46
PCDHGA3-202ENST00000612467 DAXXQ9UER7 740 aaPredicted RBP17.95■□□□□ 0.46
PCDHGA3-202ENST00000612467 IL16Q14005 1332 aa17.95■□□□□ 0.46
PCDHGA3-202ENST00000612467 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
PCDHGA3-202ENST00000612467 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
PCDHGA3-202ENST00000612467 ACEP12821 1306 aa17.93■□□□□ 0.46
PCDHGA3-202ENST00000612467 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
PCDHGA3-202ENST00000612467 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
PCDHGA3-202ENST00000612467 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
PCDHGA3-202ENST00000612467 UBR1Q8IWV7 1749 aa17.92■□□□□ 0.46
PCDHGA3-202ENST00000612467 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms