RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 ARID3AQ99856 593 aa12.71□□□□□ -0.37
LARP4B-210ENST00000609318 NEO1Q92859 1461 aa12.71□□□□□ -0.37
LARP4B-210ENST00000609318 PER1O15534 1290 aaPredicted RBP12.71□□□□□ -0.37
LARP4B-210ENST00000609318 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.37
LARP4B-210ENST00000609318 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
LARP4B-210ENST00000609318 NME9Q86XW9 330 aa12.71□□□□□ -0.38
LARP4B-210ENST00000609318 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.38
LARP4B-210ENST00000609318 SLKQ9H2G2 1235 aaPredicted RBP12.71□□□□□ -0.38
LARP4B-210ENST00000609318 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.38
LARP4B-210ENST00000609318 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
LARP4B-210ENST00000609318 EVA1CP58658 441 aa12.7□□□□□ -0.38
LARP4B-210ENST00000609318 ERCC6L2Q5T890 1561 aa12.7□□□□□ -0.38
LARP4B-210ENST00000609318 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
LARP4B-210ENST00000609318 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 TMX4Q9H1E5 349 aaPredicted RBP12.69□□□□□ -0.38
LARP4B-210ENST00000609318 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 RASSF8Q8NHQ8 419 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 GPATCH3Q96I76 525 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 NLRP2Q9NX02 1062 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
LARP4B-210ENST00000609318 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
LARP4B-210ENST00000609318 SPATA31E1Q6ZUB1 1445 aa12.68□□□□□ -0.38
LARP4B-210ENST00000609318 SETQ01105 290 aaPredicted RBP12.68□□□□□ -0.38
LARP4B-210ENST00000609318 ABCC1P33527 1531 aa12.68□□□□□ -0.38
LARP4B-210ENST00000609318 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
LARP4B-210ENST00000609318 CCDC9Q9Y3X0 531 aaKnown RBP12.68□□□□□ -0.38
LARP4B-210ENST00000609318 ADCY10Q96PN6 1610 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 PTMSP20962 102 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 CHMP3Q9Y3E7 222 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 ATP10AO60312 1499 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 ZNF428Q96B54 188 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 EMILIN1Q9Y6C2 1016 aa12.67□□□□□ -0.38
LARP4B-210ENST00000609318 ABCC11Q96J66 1382 aa12.66□□□□□ -0.38
LARP4B-210ENST00000609318 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
LARP4B-210ENST00000609318 LNPKQ9C0E8 428 aa12.66□□□□□ -0.38
LARP4B-210ENST00000609318 NEXNQ0ZGT2 675 aa12.66□□□□□ -0.38
LARP4B-210ENST00000609318 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
LARP4B-210ENST00000609318 C9orf78Q9NZ63 289 aaPredicted RBP12.66□□□□□ -0.38
LARP4B-210ENST00000609318 FYB1O15117 783 aa12.65□□□□□ -0.38
LARP4B-210ENST00000609318 CARD14Q9BXL6 1004 aa12.65□□□□□ -0.38
LARP4B-210ENST00000609318 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
LARP4B-210ENST00000609318 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
LARP4B-210ENST00000609318 CCDC30Q5VVM6 783 aa12.65□□□□□ -0.38
LARP4B-210ENST00000609318 ZMYM3Q14202 1370 aa12.65□□□□□ -0.39
LARP4B-210ENST00000609318 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
LARP4B-210ENST00000609318 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
LARP4B-210ENST00000609318 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
LARP4B-210ENST00000609318 NPATQ14207 1427 aa12.63□□□□□ -0.39
LARP4B-210ENST00000609318 RRP12Q5JTH9 1297 aaKnown RBP12.63□□□□□ -0.39
LARP4B-210ENST00000609318 CFAP74Q9C0B2 1584 aa12.63□□□□□ -0.39
LARP4B-210ENST00000609318 TAF7LQ5H9L4 462 aa12.63□□□□□ -0.39
LARP4B-210ENST00000609318 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 POLR3AO14802 1390 aaPredicted RBP12.62□□□□□ -0.39
LARP4B-210ENST00000609318 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
LARP4B-210ENST00000609318 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 PIK3C2GO75747 1445 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 C20orf194Q5TEA3 1177 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 RILPL2Q969X0 211 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 ACEP12821 1306 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
LARP4B-210ENST00000609318 MARCH6O60337 910 aa12.61□□□□□ -0.39
LARP4B-210ENST00000609318 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
LARP4B-210ENST00000609318 YTHDC2Q9H6S0 1430 aaKnown RBP12.61□□□□□ -0.39
LARP4B-210ENST00000609318 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
LARP4B-210ENST00000609318 CFAP65Q6ZU64 1925 aaKnown RBP12.61□□□□□ -0.39
LARP4B-210ENST00000609318 NPC1L1Q9UHC9 1359 aa12.61□□□□□ -0.39
LARP4B-210ENST00000609318 GNAI3P08754 354 aa12.6□□□□□ -0.39
LARP4B-210ENST00000609318 MLH3Q9UHC1 1453 aa12.6□□□□□ -0.39
LARP4B-210ENST00000609318 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
LARP4B-210ENST00000609318 ST18O60284 1047 aa12.6□□□□□ -0.39
LARP4B-210ENST00000609318 DEKP35659 375 aaKnown RBP12.6□□□□□ -0.39
LARP4B-210ENST00000609318 XPCQ01831 940 aaPredicted RBP12.6□□□□□ -0.39
LARP4B-210ENST00000609318 IFT57Q9NWB7 429 aa12.6□□□□□ -0.39
LARP4B-210ENST00000609318 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
LARP4B-210ENST00000609318 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
LARP4B-210ENST00000609318 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
LARP4B-210ENST00000609318 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
LARP4B-210ENST00000609318 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
LARP4B-210ENST00000609318 HDGFL1Q5TGJ6 251 aa12.59□□□□□ -0.39
LARP4B-210ENST00000609318 GCC1Q96CN9 775 aa12.59□□□□□ -0.39
LARP4B-210ENST00000609318 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
LARP4B-210ENST00000609318 BACH2Q9BYV9 841 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 GZF1Q9H116 711 aaPredicted RBP12.58□□□□□ -0.4
LARP4B-210ENST00000609318 PPIP5K1Q6PFW1 1433 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
LARP4B-210ENST00000609318 REC8O95072 547 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 HSP90AB4PQ58FF6 505 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 C1orf115Q9H7X2 142 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 ARAP3Q8WWN8 1544 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 FBLN1P23142 703 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 ALDH1L2Q3SY69 923 aa12.58□□□□□ -0.4
LARP4B-210ENST00000609318 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms