RNA–Protein interactions for RNA: ENST00000606476.1

LINC00993-204, long intergenic non-protein coding RNA 993, humanhuman

TSL 5 BASIC

Gene LINC00993, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-204ENST00000606476 CCDC141Q6ZP82 1450 aa6.82□□□□□ -1.32
LINC00993-204ENST00000606476 LMTK3Q96Q04 1460 aa6.82□□□□□ -1.32
LINC00993-204ENST00000606476 DSG2Q14126 1118 aa6.82□□□□□ -1.32
LINC00993-204ENST00000606476 TMEM151AQ8N4L1 468 aa6.82□□□□□ -1.32
LINC00993-204ENST00000606476 KIDINS220Q9ULH0 1771 aa6.82□□□□□ -1.32
LINC00993-204ENST00000606476 MBD5Q9P267 1494 aa6.81□□□□□ -1.32
LINC00993-204ENST00000606476 AXIN1O15169 862 aa6.81□□□□□ -1.32
LINC00993-204ENST00000606476 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
LINC00993-204ENST00000606476 CHIC2Q9UKJ5 165 aa6.81□□□□□ -1.32
LINC00993-204ENST00000606476 MYOM3Q5VTT5 1437 aa6.8□□□□□ -1.32
LINC00993-204ENST00000606476 UHRF1BP1Q6BDS2 1440 aa6.8□□□□□ -1.32
LINC00993-204ENST00000606476 RNF25Q96BH1 459 aaPredicted RBP6.8□□□□□ -1.32
LINC00993-204ENST00000606476 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
LINC00993-204ENST00000606476 AGLP35573 1532 aa6.8□□□□□ -1.32
LINC00993-204ENST00000606476 INO80Q9ULG1 1556 aaPredicted RBP6.79□□□□□ -1.32
LINC00993-204ENST00000606476 CNTLNQ9NXG0 1405 aa6.79□□□□□ -1.32
LINC00993-204ENST00000606476 RNF223E7ERA6 249 aa6.79□□□□□ -1.32
LINC00993-204ENST00000606476 RIOK3O14730 519 aaKnown RBP6.79□□□□□ -1.32
LINC00993-204ENST00000606476 GDF11O95390 407 aa6.79□□□□□ -1.32
LINC00993-204ENST00000606476 AVPP01185 164 aa6.79□□□□□ -1.32
LINC00993-204ENST00000606476 RSPH4AQ5TD94 716 aa6.79□□□□□ -1.32
LINC00993-204ENST00000606476 RRP7BPQ9NSQ0 103 aa6.79□□□□□ -1.32
LINC00993-204ENST00000606476 ZMYM3Q14202 1370 aa6.79□□□□□ -1.32
LINC00993-204ENST00000606476 DHX29Q7Z478 1369 aaKnown RBP6.79□□□□□ -1.32
LINC00993-204ENST00000606476 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
LINC00993-204ENST00000606476 REREQ9P2R6 1566 aa6.78□□□□□ -1.32
LINC00993-204ENST00000606476 MAP3K1Q13233 1512 aa6.78□□□□□ -1.32
LINC00993-204ENST00000606476 ITGAEP38570 1179 aa6.78□□□□□ -1.32
LINC00993-204ENST00000606476 VASPP50552 380 aaPredicted RBP6.78□□□□□ -1.32
LINC00993-204ENST00000606476 LIAT1Q6ZQX7 453 aa6.78□□□□□ -1.32
LINC00993-204ENST00000606476 RTEL1-TNFRSF6BF6WH68 1400 aa6.77□□□□□ -1.33
LINC00993-204ENST00000606476 MIA2Q96PC5 1412 aa6.76□□□□□ -1.33
LINC00993-204ENST00000606476 VGFO15240 615 aaPredicted RBP6.76□□□□□ -1.33
LINC00993-204ENST00000606476 RASSF7Q02833 373 aa6.76□□□□□ -1.33
LINC00993-204ENST00000606476 FBXO31Q5XUX0 539 aaPredicted RBP6.76□□□□□ -1.33
LINC00993-204ENST00000606476 PLXNC1O60486 1568 aa6.76□□□□□ -1.33
LINC00993-204ENST00000606476 CLTCQ00610 1675 aaKnown RBP6.76□□□□□ -1.33
LINC00993-204ENST00000606476 FGD6Q6ZV73 1430 aa6.76□□□□□ -1.33
LINC00993-204ENST00000606476 C3P01024 1663 aa6.75□□□□□ -1.33
LINC00993-204ENST00000606476 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
LINC00993-204ENST00000606476 KIF15Q9NS87 1388 aa6.75□□□□□ -1.33
LINC00993-204ENST00000606476 SLC16A10Q8TF71 515 aa6.75□□□□□ -1.33
LINC00993-204ENST00000606476 SPOCK2Q92563 424 aa6.75□□□□□ -1.33
LINC00993-204ENST00000606476 NCKAP5LQ9HCH0 1330 aa6.75□□□□□ -1.33
LINC00993-204ENST00000606476 PREX1Q8TCU6 1659 aa6.74□□□□□ -1.33
LINC00993-204ENST00000606476 ARHGEF5Q12774 1597 aa6.74□□□□□ -1.33
LINC00993-204ENST00000606476 GPHNQ9NQX3 736 aaPredicted RBP6.74□□□□□ -1.33
LINC00993-204ENST00000606476 PTPN23Q9H3S7 1636 aa6.74□□□□□ -1.33
LINC00993-204ENST00000606476 ABCC5O15440 1437 aa6.74□□□□□ -1.33
LINC00993-204ENST00000606476 DAPK1P53355 1430 aa6.74□□□□□ -1.33
LINC00993-204ENST00000606476 TNRQ92752 1358 aa6.73□□□□□ -1.33
LINC00993-204ENST00000606476 ONECUT3O60422 494 aaPredicted RBP6.73□□□□□ -1.33
LINC00993-204ENST00000606476 PPP1R37O75864 691 aa6.73□□□□□ -1.33
LINC00993-204ENST00000606476 GPAT2Q6NUI2 795 aa6.73□□□□□ -1.33
LINC00993-204ENST00000606476 NPATQ14207 1427 aa6.73□□□□□ -1.33
LINC00993-204ENST00000606476 PTPRKQ15262 1439 aa6.73□□□□□ -1.33
LINC00993-204ENST00000606476 ANKRD30AQ9BXX3 1397 aa6.72□□□□□ -1.33
LINC00993-204ENST00000606476 KDM5DQ9BY66 1539 aa6.72□□□□□ -1.33
LINC00993-204ENST00000606476 BTBD11A6QL63 1104 aa6.72□□□□□ -1.33
LINC00993-204ENST00000606476 CERKQ8TCT0 537 aa6.72□□□□□ -1.33
LINC00993-204ENST00000606476 TRIM47Q96LD4 638 aa6.72□□□□□ -1.33
LINC00993-204ENST00000606476 FBXO3Q9UK99 471 aa6.72□□□□□ -1.33
LINC00993-204ENST00000606476 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
LINC00993-204ENST00000606476 CTC1Q2NKJ3 1217 aa6.71□□□□□ -1.34
LINC00993-204ENST00000606476 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
LINC00993-204ENST00000606476 BCL11BQ9C0K0 894 aaPredicted RBP6.71□□□□□ -1.34
LINC00993-204ENST00000606476 PKD2L1Q9P0L9 805 aa6.71□□□□□ -1.34
LINC00993-204ENST00000606476 CAMSAP1Q5T5Y3 1602 aa6.71□□□□□ -1.34
LINC00993-204ENST00000606476 DUOX2Q9NRD8 1548 aa6.71□□□□□ -1.34
LINC00993-204ENST00000606476 KANK1Q14678 1352 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 MAST1Q9Y2H9 1570 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 NCOA1Q15788 1441 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 MYO3AQ8NEV4 1616 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 APLP1P51693 650 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 COPS2P61201 443 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 IRF7Q92985 503 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 ATP13A2Q9NQ11 1180 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 PZPP20742 1482 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 TCOF1Q13428 1488 aaKnown RBP6.7□□□□□ -1.34
LINC00993-204ENST00000606476 SHANK2Q9UPX8 1470 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 MROH2AA6NES4 1674 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 ABCC3O15438 1527 aa6.7□□□□□ -1.34
LINC00993-204ENST00000606476 CEP170BQ9Y4F5 1589 aaPredicted RBP6.69□□□□□ -1.34
LINC00993-204ENST00000606476 DNMT1P26358 1616 aaKnown RBP6.69□□□□□ -1.34
LINC00993-204ENST00000606476 PKD2Q13563 968 aa6.69□□□□□ -1.34
LINC00993-204ENST00000606476 SETD1BQ9UPS6 1966 aaKnown RBP6.69□□□□□ -1.34
LINC00993-204ENST00000606476 ERBB4Q15303 1308 aa6.69□□□□□ -1.34
LINC00993-204ENST00000606476 ZNF335Q9H4Z2 1342 aaPredicted RBP6.69□□□□□ -1.34
LINC00993-204ENST00000606476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.69□□□□□ -1.34
LINC00993-204ENST00000606476 ERBINQ96RT1 1412 aa6.68□□□□□ -1.34
LINC00993-204ENST00000606476 A2ML1A8K2U0 1454 aa6.68□□□□□ -1.34
LINC00993-204ENST00000606476 TRIM6-TRIM34B2RNG4 842 aa6.68□□□□□ -1.34
LINC00993-204ENST00000606476 PPEF1O14829 653 aaPredicted RBP6.68□□□□□ -1.34
LINC00993-204ENST00000606476 FOXC1Q12948 553 aa6.68□□□□□ -1.34
LINC00993-204ENST00000606476 SAMD7Q7Z3H4 446 aa6.68□□□□□ -1.34
LINC00993-204ENST00000606476 ANKLE2Q86XL3 938 aa6.68□□□□□ -1.34
LINC00993-204ENST00000606476 THEMISQ8N1K5 641 aaPredicted RBP6.68□□□□□ -1.34
LINC00993-204ENST00000606476 CHGAP10645 457 aaKnown RBP6.67□□□□□ -1.34
LINC00993-204ENST00000606476 VEGFBP49765 207 aa6.67□□□□□ -1.34
LINC00993-204ENST00000606476 BCANQ96GW7 911 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms