RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.56□□□□□ -0.08
CSNK1A1-209ENST00000606299 RAB3GAP2Q9H2M9 1393 aa14.55□□□□□ -0.08
CSNK1A1-209ENST00000606299 PTPRKQ15262 1439 aa14.55□□□□□ -0.08
CSNK1A1-209ENST00000606299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.55□□□□□ -0.08
CSNK1A1-209ENST00000606299 ZNF516Q92618 1163 aa14.54□□□□□ -0.08
CSNK1A1-209ENST00000606299 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
CSNK1A1-209ENST00000606299 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
CSNK1A1-209ENST00000606299 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
CSNK1A1-209ENST00000606299 ZPR1O75312 459 aa14.52□□□□□ -0.09
CSNK1A1-209ENST00000606299 SULF1Q8IWU6 871 aa14.52□□□□□ -0.09
CSNK1A1-209ENST00000606299 PHOX2BQ99453 314 aa14.52□□□□□ -0.09
CSNK1A1-209ENST00000606299 SAMD9LQ8IVG5 1584 aa14.51□□□□□ -0.09
CSNK1A1-209ENST00000606299 DAPK1P53355 1430 aa14.51□□□□□ -0.09
CSNK1A1-209ENST00000606299 MINK1Q8N4C8 1332 aaPredicted RBP14.51□□□□□ -0.09
CSNK1A1-209ENST00000606299 LMOD2Q6P5Q4 547 aa14.51□□□□□ -0.09
CSNK1A1-209ENST00000606299 BLOC1S3Q6QNY0 202 aa14.51□□□□□ -0.09
CSNK1A1-209ENST00000606299 CFDP1Q9UEE9 299 aaPredicted RBP14.51□□□□□ -0.09
CSNK1A1-209ENST00000606299 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
CSNK1A1-209ENST00000606299 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
CSNK1A1-209ENST00000606299 ARHGAP5Q13017 1502 aa14.5□□□□□ -0.09
CSNK1A1-209ENST00000606299 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
CSNK1A1-209ENST00000606299 IRF6O14896 467 aa14.49□□□□□ -0.09
CSNK1A1-209ENST00000606299 HFM1A2PYH4 1435 aa14.49□□□□□ -0.09
CSNK1A1-209ENST00000606299 KDM6BO15054 1643 aa14.48□□□□□ -0.09
CSNK1A1-209ENST00000606299 WDR7Q9Y4E6 1490 aa14.47□□□□□ -0.09
CSNK1A1-209ENST00000606299 GGCXP38435 758 aa14.47□□□□□ -0.09
CSNK1A1-209ENST00000606299 RDH13Q8NBN7 331 aa14.47□□□□□ -0.09
CSNK1A1-209ENST00000606299 NLRP7Q8WX94 980 aa14.47□□□□□ -0.09
CSNK1A1-209ENST00000606299 CHIC2Q9UKJ5 165 aa14.47□□□□□ -0.09
CSNK1A1-209ENST00000606299 ABCC5O15440 1437 aa14.47□□□□□ -0.09
CSNK1A1-209ENST00000606299 ARHGEF5Q12774 1597 aa14.47□□□□□ -0.09
CSNK1A1-209ENST00000606299 DDX11L8A8MPP1 907 aa14.46□□□□□ -0.09
CSNK1A1-209ENST00000606299 NAIPQ13075 1403 aa14.46□□□□□ -0.09
CSNK1A1-209ENST00000606299 ABCA9Q8IUA7 1624 aa14.45□□□□□ -0.1
CSNK1A1-209ENST00000606299 NR1I2O75469 434 aa14.45□□□□□ -0.1
CSNK1A1-209ENST00000606299 PPP1R18Q6NYC8 613 aa14.45□□□□□ -0.1
CSNK1A1-209ENST00000606299 AKNAQ7Z591 1439 aa14.45□□□□□ -0.1
CSNK1A1-209ENST00000606299 NKX2-3Q8TAU0 364 aa14.45□□□□□ -0.1
CSNK1A1-209ENST00000606299 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.44□□□□□ -0.1
CSNK1A1-209ENST00000606299 RRP7BPQ9NSQ0 103 aa14.44□□□□□ -0.1
CSNK1A1-209ENST00000606299 SYCP2Q9BX26 1530 aa14.43□□□□□ -0.1
CSNK1A1-209ENST00000606299 CCDC102AQ96A19 550 aa14.43□□□□□ -0.1
CSNK1A1-209ENST00000606299 ASXL2Q76L83 1435 aa14.42□□□□□ -0.1
CSNK1A1-209ENST00000606299 TMUB1Q9BVT8 246 aa14.42□□□□□ -0.1
CSNK1A1-209ENST00000606299 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
CSNK1A1-209ENST00000606299 ROCK1Q13464 1354 aa14.41□□□□□ -0.1
CSNK1A1-209ENST00000606299 SHANK2Q9UPX8 1470 aa14.41□□□□□ -0.1
CSNK1A1-209ENST00000606299 GCGRP47871 477 aa14.4□□□□□ -0.1
CSNK1A1-209ENST00000606299 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
CSNK1A1-209ENST00000606299 ABCC1P33527 1531 aa14.39□□□□□ -0.11
CSNK1A1-209ENST00000606299 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
CSNK1A1-209ENST00000606299 CCDC141Q6ZP82 1450 aa14.38□□□□□ -0.11
CSNK1A1-209ENST00000606299 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
CSNK1A1-209ENST00000606299 TLL1O43897 1013 aa14.38□□□□□ -0.11
CSNK1A1-209ENST00000606299 IRX2Q9BZI1 471 aaPredicted RBP14.38□□□□□ -0.11
CSNK1A1-209ENST00000606299 MAST1Q9Y2H9 1570 aa14.38□□□□□ -0.11
CSNK1A1-209ENST00000606299 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
CSNK1A1-209ENST00000606299 ADH1BP00325 375 aa14.37□□□□□ -0.11
CSNK1A1-209ENST00000606299 PLCH2O75038 1416 aa14.37□□□□□ -0.11
CSNK1A1-209ENST00000606299 C9orf84Q5VXU9 1444 aa14.37□□□□□ -0.11
CSNK1A1-209ENST00000606299 CFAP74Q9C0B2 1584 aa14.36□□□□□ -0.11
CSNK1A1-209ENST00000606299 MBD5Q9P267 1494 aa14.36□□□□□ -0.11
CSNK1A1-209ENST00000606299 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSNK1A1-209ENST00000606299 MDM2Q00987 491 aaPredicted RBP14.35□□□□□ -0.11
CSNK1A1-209ENST00000606299 FUT2Q10981 343 aa14.35□□□□□ -0.11
CSNK1A1-209ENST00000606299 BARGINQ6ZT62 677 aa14.35□□□□□ -0.11
CSNK1A1-209ENST00000606299 V9GY48 417 aaPredicted RBP14.35□□□□□ -0.11
CSNK1A1-209ENST00000606299 TSPOAP1O95153 1857 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 ZMYND10O75800 440 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 CD46P15529 392 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 CLCN1P35523 988 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 ATP6V1AP38606 617 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 PUS10Q3MIT2 529 aaKnown RBP14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 MORN1Q5T089 497 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 ANKRD30AQ9BXX3 1397 aa14.34□□□□□ -0.11
CSNK1A1-209ENST00000606299 NCOA1Q15788 1441 aa14.33□□□□□ -0.11
CSNK1A1-209ENST00000606299 ZC3H15Q8WU90 426 aaKnown RBP14.33□□□□□ -0.12
CSNK1A1-209ENST00000606299 PRKD2Q9BZL6 878 aa14.33□□□□□ -0.12
CSNK1A1-209ENST00000606299 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
CSNK1A1-209ENST00000606299 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
CSNK1A1-209ENST00000606299 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
CSNK1A1-209ENST00000606299 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
CSNK1A1-209ENST00000606299 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
CSNK1A1-209ENST00000606299 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
CSNK1A1-209ENST00000606299 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
CSNK1A1-209ENST00000606299 FANCAO15360 1455 aa14.31□□□□□ -0.12
CSNK1A1-209ENST00000606299 TSPY4P0CV99 314 aa14.3□□□□□ -0.12
CSNK1A1-209ENST00000606299 TSPY10P0CW01 314 aa14.3□□□□□ -0.12
CSNK1A1-209ENST00000606299 KRI1Q8N9T8 703 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-209ENST00000606299 MAP3K4Q9Y6R4 1608 aa14.3□□□□□ -0.12
CSNK1A1-209ENST00000606299 RNF223E7ERA6 249 aa14.29□□□□□ -0.12
CSNK1A1-209ENST00000606299 S1PR4O95977 384 aa14.28□□□□□ -0.12
CSNK1A1-209ENST00000606299 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
CSNK1A1-209ENST00000606299 SPSB2Q99619 263 aa14.28□□□□□ -0.12
CSNK1A1-209ENST00000606299 SLC6A16Q9GZN6 736 aa14.27□□□□□ -0.13
CSNK1A1-209ENST00000606299 SALL2Q9Y467 1007 aaPredicted RBP14.27□□□□□ -0.13
CSNK1A1-209ENST00000606299 KIF13AQ9H1H9 1805 aa14.27□□□□□ -0.13
CSNK1A1-209ENST00000606299 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms