RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 FOXD4L5Q5VV16 416 aaPredicted RBP7.08□□□□□ -1.28
AC004542.1-201ENST00000602955 SND1Q7KZF4 910 aaKnown RBP eCLIP7.08□□□□□ -1.28
AC004542.1-201ENST00000602955 FOXD4L4Q8WXT5 416 aaPredicted RBP7.08□□□□□ -1.28
AC004542.1-201ENST00000602955 THAP11Q96EK4 314 aa7.08□□□□□ -1.28
AC004542.1-201ENST00000602955 GNEQ9Y223 722 aaKnown RBP7.08□□□□□ -1.28
AC004542.1-201ENST00000602955 USP17L3A6NCW0 530 aa7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 USP17L4A6NCW7 530 aa7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 JUNDP17535 347 aa7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 EMP3P54852 163 aa7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 USP17L2Q6R6M4 530 aa7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 USP17L1Q7RTZ2 530 aa7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 GPSM3Q9Y4H4 160 aa7.07□□□□□ -1.28
AC004542.1-201ENST00000602955 USP17L5A8MUK1 530 aa7.06□□□□□ -1.28
AC004542.1-201ENST00000602955 NR1I2O75469 434 aa7.06□□□□□ -1.28
AC004542.1-201ENST00000602955 CCDC27Q2M243 656 aa7.06□□□□□ -1.28
AC004542.1-201ENST00000602955 SCUBE3Q8IX30 993 aa7.06□□□□□ -1.28
AC004542.1-201ENST00000602955 ZMIZ1Q9ULJ6 1067 aa7.06□□□□□ -1.28
AC004542.1-201ENST00000602955 SKIP12755 728 aa7.05□□□□□ -1.28
AC004542.1-201ENST00000602955 APLP1P51693 650 aa7.05□□□□□ -1.28
AC004542.1-201ENST00000602955 ADGRD1Q6QNK2 874 aa7.05□□□□□ -1.28
AC004542.1-201ENST00000602955 FAM174AQ8TBP5 190 aa7.05□□□□□ -1.28
AC004542.1-201ENST00000602955 STK32AQ8WU08 396 aa7.05□□□□□ -1.28
AC004542.1-201ENST00000602955 ZNF592Q92610 1267 aa7.05□□□□□ -1.28
AC004542.1-201ENST00000602955 MAP10Q9P2G4 905 aa7.05□□□□□ -1.28
AC004542.1-201ENST00000602955 FAM196BA6NMK8 535 aa7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 ST18O60284 1047 aa7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 MCCD1P59942 119 aaPredicted RBP7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 PPP4CP60510 307 aa7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 TMEM164Q5U3C3 297 aa7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 ARMC2Q8NEN0 867 aa7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 ANKK1Q8NFD2 765 aa7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 GPKOWQ92917 476 aaPredicted RBP eCLIP7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 NOVA2Q9UNW9 492 aaKnown RBP7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 AMOTL2Q9Y2J4 779 aa7.04□□□□□ -1.28
AC004542.1-201ENST00000602955 SOWAHBA6NEL2 793 aa7.03□□□□□ -1.28
AC004542.1-201ENST00000602955 HRO43593 1189 aa7.03□□□□□ -1.28
AC004542.1-201ENST00000602955 CCNYL3P0C7X3 344 aa7.03□□□□□ -1.28
AC004542.1-201ENST00000602955 LSM11P83369 360 aaKnown RBP eCLIP7.03□□□□□ -1.28
AC004542.1-201ENST00000602955 MSS51Q4VC12 460 aa7.03□□□□□ -1.28
AC004542.1-201ENST00000602955 PDXDC2PQ6P474 469 aa7.03□□□□□ -1.28
AC004542.1-201ENST00000602955 PCDHB3Q9Y5E6 796 aa7.03□□□□□ -1.28
AC004542.1-201ENST00000602955 FAM205CA6NFA0 338 aa7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 LZTS3O60299 673 aaPredicted RBP7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 DXOO77932 396 aaKnown RBP7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 CTHP32929 405 aa7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 RBM25P49756 843 aaKnown RBP7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 PTK2Q05397 1052 aa7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 MARVELD3Q96A59 401 aa7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 EVA1BQ9NVM1 165 aa7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 CEP126Q9P2H0 1117 aa7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 TSR3Q9UJK0 312 aaKnown RBP7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 HPS5Q9UPZ3 1129 aa7.02□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L15C9J2P7 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L10C9JJH3 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L13C9JLJ4 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L12C9JPN9 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L11C9JVI0 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L21D6R901 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L18D6R9N7 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L22D6RA61 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L17D6RBQ6 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L19D6RCP7 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L20D6RJB6 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 USP17L24Q0WX57 530 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 SLFNL1Q499Z3 407 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 CRTC2Q53ET0 693 aaPredicted RBP7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 PHLDB3Q6NSJ2 640 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 TXNDC2Q86VQ3 553 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 DEPDC4Q8N2C3 294 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 PHTF2Q8N3S3 785 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 CCER1Q8TC90 406 aaPredicted RBP7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 ZNF428Q96B54 188 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 OCSTAMPQ9BR26 566 aa7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
AC004542.1-201ENST00000602955 ATP5J2-PTCD1G3V325 749 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 SSFA2P28290 1259 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 MMP16P51512 607 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 KCNH2Q12809 1159 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 PTK7Q13308 1070 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 NBPF14Q5TI25 921 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 LARP1Q6PKG0 1096 aaKnown RBP7□□□□□ -1.29
AC004542.1-201ENST00000602955 RNF135Q8IUD6 432 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 CHIC2Q9UKJ5 165 aa7□□□□□ -1.29
AC004542.1-201ENST00000602955 GOLGA8CPA6NN73 597 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 BCAMP50895 628 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 FAM69CQ0P6D2 419 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 NCOA4Q13772 614 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 MAP7D1Q3KQU3 841 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 FAM160A2Q8N612 972 aaPredicted RBP6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 PLPP7Q8NBV4 271 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 CLP1Q92989 425 aaKnown RBP6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 NUDT12Q9BQG2 462 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 CDCA7Q9BWT1 371 aaPredicted RBP6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 PCDHB9Q9Y5E1 797 aa6.99□□□□□ -1.29
AC004542.1-201ENST00000602955 POTEB3A0JP26 581 aa6.98□□□□□ -1.29
AC004542.1-201ENST00000602955 E9PSI1 815 aa6.98□□□□□ -1.29
AC004542.1-201ENST00000602955 RASA1P20936 1047 aa6.98□□□□□ -1.29
AC004542.1-201ENST00000602955 ARID4AP29374 1257 aaPredicted RBP6.98□□□□□ -1.29
AC004542.1-201ENST00000602955 POTEBQ6S5H4 581 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms