RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 PRAM1Q96QH2 718 aa28.26■■■□□ 2.12
CAPN12-212ENST00000601953 SPATA31D1Q6ZQQ2 1576 aa28.26■■■□□ 2.11
CAPN12-212ENST00000601953 TCP11L2Q8N4U5 519 aa28.25■■■□□ 2.11
CAPN12-212ENST00000601953 CCDC27Q2M243 656 aa28.23■■■□□ 2.11
CAPN12-212ENST00000601953 STAG3Q9UJ98 1225 aa28.23■■■□□ 2.11
CAPN12-212ENST00000601953 A2ML1A8K2U0 1454 aa28.22■■■□□ 2.11
CAPN12-212ENST00000601953 MED14O60244 1454 aa28.22■■■□□ 2.11
CAPN12-212ENST00000601953 BCAR3O75815 825 aa28.22■■■□□ 2.11
CAPN12-212ENST00000601953 WDR63Q8IWG1 891 aa28.22■■■□□ 2.11
CAPN12-212ENST00000601953 TERF2IPQ9NYB0 399 aa28.22■■■□□ 2.11
CAPN12-212ENST00000601953 MINK1Q8N4C8 1332 aaPredicted RBP28.22■■■□□ 2.11
CAPN12-212ENST00000601953 CD163L1Q9NR16 1453 aa28.21■■■□□ 2.11
CAPN12-212ENST00000601953 ARHGEF40Q8TER5 1519 aa28.2■■■□□ 2.1
CAPN12-212ENST00000601953 SLKQ9H2G2 1235 aaPredicted RBP28.2■■■□□ 2.1
CAPN12-212ENST00000601953 DLC1Q96QB1 1528 aa28.19■■■□□ 2.1
CAPN12-212ENST00000601953 SENP3Q9H4L4 574 aaPredicted RBP28.19■■■□□ 2.1
CAPN12-212ENST00000601953 NLRP1Q9C000 1473 aa28.18■■■□□ 2.1
CAPN12-212ENST00000601953 ANKRD26Q9UPS8 1709 aa28.18■■■□□ 2.1
CAPN12-212ENST00000601953 MAPK8IP3Q9UPT6 1336 aa28.17■■■□□ 2.1
CAPN12-212ENST00000601953 PDE3AQ14432 1141 aa28.17■■■□□ 2.1
CAPN12-212ENST00000601953 RRP7AQ9Y3A4 280 aaKnown RBP28.17■■■□□ 2.1
CAPN12-212ENST00000601953 ADGRB2O60241 1585 aa28.16■■■□□ 2.1
CAPN12-212ENST00000601953 NEUROD2Q15784 382 aa28.15■■■□□ 2.1
CAPN12-212ENST00000601953 RIMS2Q9UQ26 1411 aa28.15■■■□□ 2.1
CAPN12-212ENST00000601953 FYB1O15117 783 aa28.14■■■□□ 2.1
CAPN12-212ENST00000601953 U2AF1L5P0DN76 240 aaPredicted RBP28.14■■■□□ 2.09
CAPN12-212ENST00000601953 U2AF1Q01081 240 aaKnown RBP eCLIP28.14■■■□□ 2.09
CAPN12-212ENST00000601953 CDK19Q9BWU1 502 aa28.14■■■□□ 2.09
CAPN12-212ENST00000601953 COL3A1P02461 1466 aaPredicted RBP28.14■■■□□ 2.09
CAPN12-212ENST00000601953 MRE11P49959 708 aa28.13■■■□□ 2.09
CAPN12-212ENST00000601953 PANK2Q9BZ23 570 aa28.13■■■□□ 2.09
CAPN12-212ENST00000601953 GGNBP2Q9H3C7 697 aa28.13■■■□□ 2.09
CAPN12-212ENST00000601953 SETD1AO15047 1707 aaKnown RBP28.13■■■□□ 2.09
CAPN12-212ENST00000601953 HDGFL2Q7Z4V5 671 aaPredicted RBP28.11■■■□□ 2.09
CAPN12-212ENST00000601953 SEC24BO95487 1268 aa28.11■■■□□ 2.09
CAPN12-212ENST00000601953 MCM4P33991 863 aa28.09■■■□□ 2.09
CAPN12-212ENST00000601953 ISY1Q9ULR0 285 aaKnown RBP28.08■■■□□ 2.09
CAPN12-212ENST00000601953 RARSP54136 660 aaKnown RBP28.08■■■□□ 2.09
CAPN12-212ENST00000601953 ZMYM3Q14202 1370 aa28.06■■■□□ 2.08
CAPN12-212ENST00000601953 ESPNB1AK53 854 aa28.06■■■□□ 2.08
CAPN12-212ENST00000601953 MYH16Q9H6N6 1097 aa28.06■■■□□ 2.08
CAPN12-212ENST00000601953 CABP1Q9NZU7 370 aa28.06■■■□□ 2.08
CAPN12-212ENST00000601953 TPM2P07951 284 aa28.06■■■□□ 2.08
CAPN12-212ENST00000601953 PLEKHF1Q96S99 279 aa28.06■■■□□ 2.08
CAPN12-212ENST00000601953 ATP7BP35670 1465 aa28.05■■■□□ 2.08
CAPN12-212ENST00000601953 PNPLA6Q8IY17 1366 aa28.05■■■□□ 2.08
CAPN12-212ENST00000601953 IGHDP01880 384 aa28.04■■■□□ 2.08
CAPN12-212ENST00000601953 MLECQ14165 292 aa28.04■■■□□ 2.08
CAPN12-212ENST00000601953 UPF2Q9HAU5 1272 aaKnown RBP28.04■■■□□ 2.08
CAPN12-212ENST00000601953 TBC1D32Q96NH3 1257 aa28.04■■■□□ 2.08
CAPN12-212ENST00000601953 TBC1D2Q9BYX2 928 aa28.04■■■□□ 2.08
CAPN12-212ENST00000601953 KIF20BQ96Q89 1820 aa28.04■■■□□ 2.08
CAPN12-212ENST00000601953 ARXQ96QS3 562 aa28.03■■■□□ 2.08
CAPN12-212ENST00000601953 KIF13AQ9H1H9 1805 aa28.03■■■□□ 2.08
CAPN12-212ENST00000601953 CANXP27824 592 aaKnown RBP28.03■■■□□ 2.08
CAPN12-212ENST00000601953 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
CAPN12-212ENST00000601953 NRXN3Q9Y4C0 1643 aa28.03■■■□□ 2.08
CAPN12-212ENST00000601953 PDCL3Q9H2J4 239 aa28.02■■■□□ 2.08
CAPN12-212ENST00000601953 WAPLQ7Z5K2 1190 aa28.01■■■□□ 2.07
CAPN12-212ENST00000601953 AAMPQ13685 434 aa28.01■■■□□ 2.07
CAPN12-212ENST00000601953 U2SURPO15042 1029 aaKnown RBP28■■■□□ 2.07
CAPN12-212ENST00000601953 TRAK2O60296 914 aa28■■■□□ 2.07
CAPN12-212ENST00000601953 CLUAP1Q96AJ1 413 aa28■■■□□ 2.07
CAPN12-212ENST00000601953 PANK1Q8TE04 598 aa27.99■■■□□ 2.07
CAPN12-212ENST00000601953 GRPEL1Q9HAV7 217 aa27.99■■■□□ 2.07
CAPN12-212ENST00000601953 TMPOP42166 694 aaKnown RBP27.98■■■□□ 2.07
CAPN12-212ENST00000601953 GZF1Q9H116 711 aaPredicted RBP27.98■■■□□ 2.07
CAPN12-212ENST00000601953 CT47B1P0C2W7 299 aaPredicted RBP27.97■■■□□ 2.07
CAPN12-212ENST00000601953 COG6Q9Y2V7 657 aa27.97■■■□□ 2.07
CAPN12-212ENST00000601953 DIAPH1O60610 1272 aaKnown RBP27.96■■■□□ 2.07
CAPN12-212ENST00000601953 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
CAPN12-212ENST00000601953 CHMP5Q9NZZ3 219 aa27.95■■■□□ 2.07
CAPN12-212ENST00000601953 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
CAPN12-212ENST00000601953 ERBB4Q15303 1308 aa27.94■■■□□ 2.06
CAPN12-212ENST00000601953 METP08581 1390 aa27.94■■■□□ 2.06
CAPN12-212ENST00000601953 SIRT1Q96EB6 747 aa27.94■■■□□ 2.06
CAPN12-212ENST00000601953 TRIM35Q9UPQ4 493 aa27.94■■■□□ 2.06
CAPN12-212ENST00000601953 IL16Q14005 1332 aa27.94■■■□□ 2.06
CAPN12-212ENST00000601953 CPSF1Q10570 1443 aaKnown RBP27.93■■■□□ 2.06
CAPN12-212ENST00000601953 TECPR2O15040 1411 aa27.93■■■□□ 2.06
CAPN12-212ENST00000601953 FAM135BQ49AJ0 1406 aa27.93■■■□□ 2.06
CAPN12-212ENST00000601953 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
CAPN12-212ENST00000601953 WASLO00401 505 aaPredicted RBP27.92■■■□□ 2.06
CAPN12-212ENST00000601953 HDGFP51858 240 aaKnown RBP27.92■■■□□ 2.06
CAPN12-212ENST00000601953 DDX11L8A8MPP1 907 aa27.91■■■□□ 2.06
CAPN12-212ENST00000601953 EDC4Q6P2E9 1401 aaKnown RBP27.9■■■□□ 2.06
CAPN12-212ENST00000601953 TNRQ92752 1358 aa27.9■■■□□ 2.06
CAPN12-212ENST00000601953 CALD1Q05682 793 aaKnown RBP27.89■■■□□ 2.06
CAPN12-212ENST00000601953 TRIM44Q96DX7 344 aaPredicted RBP27.89■■■□□ 2.06
CAPN12-212ENST00000601953 RLBP1P12271 317 aa27.88■■■□□ 2.05
CAPN12-212ENST00000601953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.88■■■□□ 2.05
CAPN12-212ENST00000601953 PPIP5K1Q6PFW1 1433 aa27.88■■■□□ 2.05
CAPN12-212ENST00000601953 FCHSD2O94868 740 aa27.88■■■□□ 2.05
CAPN12-212ENST00000601953 POLKQ9UBT6 870 aa27.88■■■□□ 2.05
CAPN12-212ENST00000601953 PODXL2Q9NZ53 605 aa27.87■■■□□ 2.05
CAPN12-212ENST00000601953 BCL2L13Q9BXK5 485 aa27.87■■■□□ 2.05
CAPN12-212ENST00000601953 CPS1P31327 1500 aa27.86■■■□□ 2.05
CAPN12-212ENST00000601953 TSR2Q969E8 191 aaKnown RBP27.86■■■□□ 2.05
CAPN12-212ENST00000601953 PMFBP1Q8TBY8 1022 aa27.85■■■□□ 2.05
CAPN12-212ENST00000601953 RIPK4P57078 832 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms