RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
C19orf54-210ENST00000600139 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
C19orf54-210ENST00000600139 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
C19orf54-210ENST00000600139 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
C19orf54-210ENST00000600139 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
C19orf54-210ENST00000600139 BTG4Q9NY30 223 aa12.94□□□□□ -0.34
C19orf54-210ENST00000600139 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
C19orf54-210ENST00000600139 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
C19orf54-210ENST00000600139 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
C19orf54-210ENST00000600139 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
C19orf54-210ENST00000600139 DISP2A7MBM2 1401 aa12.93□□□□□ -0.34
C19orf54-210ENST00000600139 EIF3AQ14152 1382 aaKnown RBP12.93□□□□□ -0.34
C19orf54-210ENST00000600139 HRCP23327 699 aa12.92□□□□□ -0.34
C19orf54-210ENST00000600139 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
C19orf54-210ENST00000600139 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
C19orf54-210ENST00000600139 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
C19orf54-210ENST00000600139 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
C19orf54-210ENST00000600139 NUDT16Q96DE0 195 aaKnown RBP12.91□□□□□ -0.34
C19orf54-210ENST00000600139 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
C19orf54-210ENST00000600139 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
C19orf54-210ENST00000600139 USP19O94966 1318 aa12.89□□□□□ -0.35
C19orf54-210ENST00000600139 SPATA31A1Q5TZJ5 1347 aa12.89□□□□□ -0.35
C19orf54-210ENST00000600139 RREB1Q92766 1687 aa12.89□□□□□ -0.35
C19orf54-210ENST00000600139 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
C19orf54-210ENST00000600139 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
C19orf54-210ENST00000600139 CHRNA2Q15822 529 aa12.88□□□□□ -0.35
C19orf54-210ENST00000600139 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
C19orf54-210ENST00000600139 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
C19orf54-210ENST00000600139 COL18A1P39060 1754 aa12.87□□□□□ -0.35
C19orf54-210ENST00000600139 QRICH2Q9H0J4 1663 aa12.87□□□□□ -0.35
C19orf54-210ENST00000600139 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
C19orf54-210ENST00000600139 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
C19orf54-210ENST00000600139 CCDC9Q9Y3X0 531 aaKnown RBP12.87□□□□□ -0.35
C19orf54-210ENST00000600139 NUP188Q5SRE5 1749 aa12.87□□□□□ -0.35
C19orf54-210ENST00000600139 ACEP12821 1306 aa12.87□□□□□ -0.35
C19orf54-210ENST00000600139 PIK3C2AO00443 1686 aa12.86□□□□□ -0.35
C19orf54-210ENST00000600139 CPDO75976 1380 aa12.86□□□□□ -0.35
C19orf54-210ENST00000600139 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
C19orf54-210ENST00000600139 SLIT3O75094 1523 aa12.86□□□□□ -0.35
C19orf54-210ENST00000600139 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
C19orf54-210ENST00000600139 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
C19orf54-210ENST00000600139 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
C19orf54-210ENST00000600139 NUTM2GQ5VZR2 741 aa12.85□□□□□ -0.35
C19orf54-210ENST00000600139 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
C19orf54-210ENST00000600139 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
C19orf54-210ENST00000600139 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
C19orf54-210ENST00000600139 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
C19orf54-210ENST00000600139 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.35
C19orf54-210ENST00000600139 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
C19orf54-210ENST00000600139 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
C19orf54-210ENST00000600139 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
C19orf54-210ENST00000600139 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
C19orf54-210ENST00000600139 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
C19orf54-210ENST00000600139 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
C19orf54-210ENST00000600139 USP6P35125 1406 aa12.81□□□□□ -0.36
C19orf54-210ENST00000600139 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
C19orf54-210ENST00000600139 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
C19orf54-210ENST00000600139 AKAP12Q02952 1782 aa12.8□□□□□ -0.36
C19orf54-210ENST00000600139 BAG6P46379 1132 aa12.8□□□□□ -0.36
C19orf54-210ENST00000600139 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
C19orf54-210ENST00000600139 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
C19orf54-210ENST00000600139 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
C19orf54-210ENST00000600139 UTRNP46939 3433 aa12.8□□□□□ -0.36
C19orf54-210ENST00000600139 STRN4Q9NRL3 753 aa12.79□□□□□ -0.36
C19orf54-210ENST00000600139 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
C19orf54-210ENST00000600139 NFAT5O94916 1531 aa12.78□□□□□ -0.36
C19orf54-210ENST00000600139 A0A0G2JS52 829 aa12.78□□□□□ -0.36
C19orf54-210ENST00000600139 TRIM37O94972 964 aa12.78□□□□□ -0.36
C19orf54-210ENST00000600139 MYT1Q01538 1121 aa12.78□□□□□ -0.36
C19orf54-210ENST00000600139 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
C19orf54-210ENST00000600139 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
C19orf54-210ENST00000600139 RGPD5Q99666 1765 aa12.77□□□□□ -0.36
C19orf54-210ENST00000600139 USP54Q70EL1 1684 aa12.77□□□□□ -0.37
C19orf54-210ENST00000600139 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
C19orf54-210ENST00000600139 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
C19orf54-210ENST00000600139 GCP02774 474 aa12.76□□□□□ -0.37
C19orf54-210ENST00000600139 PTF1AQ7RTS3 328 aa12.76□□□□□ -0.37
C19orf54-210ENST00000600139 L3MBTL2Q969R5 705 aa12.76□□□□□ -0.37
C19orf54-210ENST00000600139 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
C19orf54-210ENST00000600139 AATKQ6ZMQ8 1374 aa12.75□□□□□ -0.37
C19orf54-210ENST00000600139 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
C19orf54-210ENST00000600139 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
C19orf54-210ENST00000600139 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
C19orf54-210ENST00000600139 ABTB2Q8N961 1025 aa12.75□□□□□ -0.37
C19orf54-210ENST00000600139 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
C19orf54-210ENST00000600139 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
C19orf54-210ENST00000600139 CD163L1Q9NR16 1453 aa12.74□□□□□ -0.37
C19orf54-210ENST00000600139 CRB1P82279 1406 aa12.74□□□□□ -0.37
C19orf54-210ENST00000600139 CPSF1Q10570 1443 aaKnown RBP12.74□□□□□ -0.37
C19orf54-210ENST00000600139 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
C19orf54-210ENST00000600139 CABP1Q9NZU7 370 aa12.74□□□□□ -0.37
C19orf54-210ENST00000600139 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
C19orf54-210ENST00000600139 SIN3AQ96ST3 1273 aa12.73□□□□□ -0.37
C19orf54-210ENST00000600139 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
C19orf54-210ENST00000600139 BCL9O00512 1426 aa12.71□□□□□ -0.37
C19orf54-210ENST00000600139 NLRP13Q86W25 1043 aa12.71□□□□□ -0.37
C19orf54-210ENST00000600139 APBA3O96018 575 aa12.7□□□□□ -0.38
C19orf54-210ENST00000600139 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
C19orf54-210ENST00000600139 THRAP3Q9Y2W1 955 aaKnown RBP12.7□□□□□ -0.38
C19orf54-210ENST00000600139 OVOS2A0A0G2JMS6 1433 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms