RNA–Protein interactions for RNA: ENST00000598708.1

LRMDA-214, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-214ENST00000598708 USP54Q70EL1 1684 aa10.65□□□□□ -0.7
LRMDA-214ENST00000598708 PER1O15534 1290 aaPredicted RBP10.64□□□□□ -0.71
LRMDA-214ENST00000598708 PPP4R2Q9NY27 417 aa10.64□□□□□ -0.71
LRMDA-214ENST00000598708 NUDCQ9Y266 331 aa10.64□□□□□ -0.71
LRMDA-214ENST00000598708 JCADQ9P266 1359 aa10.64□□□□□ -0.71
LRMDA-214ENST00000598708 NPC1L1Q9UHC9 1359 aa10.64□□□□□ -0.71
LRMDA-214ENST00000598708 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
LRMDA-214ENST00000598708 PHRF1Q9P1Y6 1649 aaKnown RBP10.63□□□□□ -0.71
LRMDA-214ENST00000598708 ESCO1Q5FWF5 840 aa10.63□□□□□ -0.71
LRMDA-214ENST00000598708 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
LRMDA-214ENST00000598708 POLR3AO14802 1390 aaPredicted RBP10.63□□□□□ -0.71
LRMDA-214ENST00000598708 DISP3Q9P2K9 1392 aa10.63□□□□□ -0.71
LRMDA-214ENST00000598708 NPHP3Q7Z494 1330 aa10.62□□□□□ -0.71
LRMDA-214ENST00000598708 PDE3BQ13370 1112 aa10.62□□□□□ -0.71
LRMDA-214ENST00000598708 PHF8Q9UPP1 1060 aa10.62□□□□□ -0.71
LRMDA-214ENST00000598708 LRP6O75581 1613 aa10.62□□□□□ -0.71
LRMDA-214ENST00000598708 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
LRMDA-214ENST00000598708 DDX17Q92841 729 aaKnown RBP10.61□□□□□ -0.71
LRMDA-214ENST00000598708 NUDT16Q96DE0 195 aaKnown RBP10.61□□□□□ -0.71
LRMDA-214ENST00000598708 PNPLA6Q8IY17 1366 aa10.61□□□□□ -0.71
LRMDA-214ENST00000598708 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.61□□□□□ -0.71
LRMDA-214ENST00000598708 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
LRMDA-214ENST00000598708 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
LRMDA-214ENST00000598708 PPIP5K1Q6PFW1 1433 aa10.6□□□□□ -0.71
LRMDA-214ENST00000598708 PLEKHG3A1L390 1219 aa10.6□□□□□ -0.71
LRMDA-214ENST00000598708 LRRC59Q96AG4 307 aaKnown RBP10.6□□□□□ -0.71
LRMDA-214ENST00000598708 PUS7Q96PZ0 661 aaKnown RBP10.6□□□□□ -0.71
LRMDA-214ENST00000598708 CCDC61Q9Y6R9 512 aa10.6□□□□□ -0.71
LRMDA-214ENST00000598708 SBNO1A3KN83 1393 aa10.6□□□□□ -0.71
LRMDA-214ENST00000598708 SPATA31A6Q5VVP1 1343 aa10.59□□□□□ -0.71
LRMDA-214ENST00000598708 TNS3Q68CZ2 1445 aa10.59□□□□□ -0.71
LRMDA-214ENST00000598708 NWD2Q9ULI1 1742 aa10.59□□□□□ -0.71
LRMDA-214ENST00000598708 FOXO3O43524 673 aa10.59□□□□□ -0.71
LRMDA-214ENST00000598708 CD163L1Q9NR16 1453 aa10.59□□□□□ -0.71
LRMDA-214ENST00000598708 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
LRMDA-214ENST00000598708 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
LRMDA-214ENST00000598708 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
LRMDA-214ENST00000598708 ATAD2Q6PL18 1390 aa10.58□□□□□ -0.72
LRMDA-214ENST00000598708 PANK3Q9H999 370 aa10.58□□□□□ -0.72
LRMDA-214ENST00000598708 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
LRMDA-214ENST00000598708 CPSF1Q10570 1443 aaKnown RBP10.58□□□□□ -0.72
LRMDA-214ENST00000598708 SPATA31A3Q5VYP0 1347 aa10.58□□□□□ -0.72
LRMDA-214ENST00000598708 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
LRMDA-214ENST00000598708 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
LRMDA-214ENST00000598708 ANKRD26Q9UPS8 1709 aa10.56□□□□□ -0.72
LRMDA-214ENST00000598708 SRPK2P78362 688 aaKnown RBP10.56□□□□□ -0.72
LRMDA-214ENST00000598708 KRT28Q7Z3Y7 464 aa10.56□□□□□ -0.72
LRMDA-214ENST00000598708 PMFBP1Q8TBY8 1022 aa10.56□□□□□ -0.72
LRMDA-214ENST00000598708 USP6P35125 1406 aa10.56□□□□□ -0.72
LRMDA-214ENST00000598708 ACEP12821 1306 aa10.56□□□□□ -0.72
LRMDA-214ENST00000598708 LTN1O94822 1766 aa10.55□□□□□ -0.72
LRMDA-214ENST00000598708 RGPD5Q99666 1765 aa10.55□□□□□ -0.72
LRMDA-214ENST00000598708 KNSTRNQ9Y448 316 aa10.55□□□□□ -0.72
LRMDA-214ENST00000598708 COL14A1Q05707 1796 aaKnown RBP10.54□□□□□ -0.72
LRMDA-214ENST00000598708 ARHGEF10O15013 1369 aa10.54□□□□□ -0.72
LRMDA-214ENST00000598708 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
LRMDA-214ENST00000598708 XPCQ01831 940 aaPredicted RBP10.54□□□□□ -0.72
LRMDA-214ENST00000598708 PSME1Q06323 249 aa10.54□□□□□ -0.72
LRMDA-214ENST00000598708 COL18A1P39060 1754 aa10.54□□□□□ -0.72
LRMDA-214ENST00000598708 SLIT3O75094 1523 aa10.53□□□□□ -0.72
LRMDA-214ENST00000598708 CABP1Q9NZU7 370 aa10.53□□□□□ -0.72
LRMDA-214ENST00000598708 LMO7Q8WWI1 1683 aa10.53□□□□□ -0.72
LRMDA-214ENST00000598708 AMER1Q5JTC6 1135 aaPredicted RBP10.52□□□□□ -0.73
LRMDA-214ENST00000598708 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
LRMDA-214ENST00000598708 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
LRMDA-214ENST00000598708 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
LRMDA-214ENST00000598708 RGS17Q9UGC6 210 aaPredicted RBP10.5□□□□□ -0.73
LRMDA-214ENST00000598708 A0A1W2PP64 1363 aa10.5□□□□□ -0.73
LRMDA-214ENST00000598708 MAP2P11137 1827 aaKnown RBP10.49□□□□□ -0.73
LRMDA-214ENST00000598708 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
LRMDA-214ENST00000598708 SLIT2O94813 1529 aa10.49□□□□□ -0.73
LRMDA-214ENST00000598708 CC2D1BQ5T0F9 858 aaKnown RBP10.49□□□□□ -0.73
LRMDA-214ENST00000598708 RBM19Q9Y4C8 960 aaKnown RBP10.49□□□□□ -0.73
LRMDA-214ENST00000598708 ANKRD36BQ8N2N9 1353 aa10.49□□□□□ -0.73
LRMDA-214ENST00000598708 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
LRMDA-214ENST00000598708 NFAT5O94916 1531 aa10.48□□□□□ -0.73
LRMDA-214ENST00000598708 PPP2R1AP30153 589 aa10.48□□□□□ -0.73
LRMDA-214ENST00000598708 SLC12A5Q9H2X9 1139 aa10.48□□□□□ -0.73
LRMDA-214ENST00000598708 USP19O94966 1318 aa10.48□□□□□ -0.73
LRMDA-214ENST00000598708 TTC21AQ8NDW8 1320 aa10.48□□□□□ -0.73
LRMDA-214ENST00000598708 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
LRMDA-214ENST00000598708 IRX6P78412 446 aaPredicted RBP10.47□□□□□ -0.73
LRMDA-214ENST00000598708 RCAN3Q9UKA8 241 aa10.47□□□□□ -0.73
LRMDA-214ENST00000598708 FANCIQ9NVI1 1328 aa10.47□□□□□ -0.73
LRMDA-214ENST00000598708 USP31Q70CQ4 1352 aa10.47□□□□□ -0.73
LRMDA-214ENST00000598708 ABCC6O95255 1503 aa10.47□□□□□ -0.73
LRMDA-214ENST00000598708 BRWD3Q6RI45 1802 aa10.47□□□□□ -0.73
LRMDA-214ENST00000598708 CNGB1Q14028 1251 aaPredicted RBP10.46□□□□□ -0.73
LRMDA-214ENST00000598708 WDR43Q15061 677 aaKnown RBP eCLIP10.46□□□□□ -0.73
LRMDA-214ENST00000598708 FNBP4Q8N3X1 1017 aaPredicted RBP10.46□□□□□ -0.73
LRMDA-214ENST00000598708 TTC21BQ7Z4L5 1316 aa10.46□□□□□ -0.73
LRMDA-214ENST00000598708 OVOS2A0A0J9YW53 1432 aa10.46□□□□□ -0.74
LRMDA-214ENST00000598708 OVOS2Q6IE36 1432 aa10.46□□□□□ -0.74
LRMDA-214ENST00000598708 BCL9LQ86UU0 1499 aa10.46□□□□□ -0.74
LRMDA-214ENST00000598708 FAM208AQ9UK61 1670 aaKnown RBP10.45□□□□□ -0.74
LRMDA-214ENST00000598708 GLI3P10071 1580 aa10.45□□□□□ -0.74
LRMDA-214ENST00000598708 CPDO75976 1380 aa10.45□□□□□ -0.74
LRMDA-214ENST00000598708 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
LRMDA-214ENST00000598708 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
LRMDA-214ENST00000598708 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms